RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 TMEM14BQ9NUH8 114 aa8.09□□□□□ -1.11
MSH2-202ENST00000406134 TMEM140Q9NV12 185 aa8.09□□□□□ -1.11
MSH2-202ENST00000406134 PITPNC1Q9UKF7 332 aa8.09□□□□□ -1.11
MSH2-202ENST00000406134 LAMP3Q9UQV4 416 aa8.09□□□□□ -1.11
MSH2-202ENST00000406134 VPS13CQ709C8 3753 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 SAA2-SAA4A0A096LPE2 208 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 TRGV8A0A0C4DH27 118 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 VENTXO95231 258 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 STAG3L2P0CL84 134 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 STAG3L3P0CL85 134 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 SAA2P0DJI9 122 aaPredicted RBP8.08□□□□□ -1.12
MSH2-202ENST00000406134 TMEM11P17152 192 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 GPR12P47775 334 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 OR1P1Q8NH06 330 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 FAM234AQ9H0X4 552 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 ZNRD1Q9P1U0 126 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 GAB2Q9UQC2 676 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 TNCP24821 2201 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 SPAARA0A1B0GVQ0 90 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 K7EN84 100 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 TGOLN2O43493 480 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 ARL14EPLP0DKL9 152 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 IL3RAP26951 378 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 EDDM3BP56851 147 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 LINC00310P59036 64 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 MIC13Q5XKP0 118 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 TRAT1Q6PIZ9 186 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 SNRNP40Q96DI7 357 aaKnown RBP8.08□□□□□ -1.12
MSH2-202ENST00000406134 A0A1B0GUS0 222 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 C15orf61A6NNL5 157 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 M0R1X1 148 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 MGST3O14880 152 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 FOXH1O75593 365 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 FTH1P19P0C7X4 201 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 OR5R1Q8NH85 324 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 ZCCHC14Q8WYQ9 949 aaKnown RBP8.08□□□□□ -1.12
MSH2-202ENST00000406134 SEPSECSQ9HD40 501 aaKnown RBP8.08□□□□□ -1.12
MSH2-202ENST00000406134 CALYQ9NYX4 217 aa8.08□□□□□ -1.12
MSH2-202ENST00000406134 IGKV1OR2-108A0A075B7D4 117 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 SMCO3A2RU48 225 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 SPINT2O43291 252 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 UBE2G2P60604 165 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 STUMQ69YW2 141 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 MOGAT3Q86VF5 341 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 FAM216AQ8WUB2 273 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 TMEM204Q9BSN7 226 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 LINC00574Q9H8X3 128 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 IDI2-AS1Q9NZ38 188 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 TP53TG3Q9ULZ0 132 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 SCO2A0A1W2PP80 73 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 K7EM74 188 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 NUPR1O60356 82 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 S100A2P29034 98 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 ANAPC16Q96DE5 110 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 ZNF503Q96F45 646 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 MISP3Q96FF7 219 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 PRO1933Q9H354 126 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 KCNIP2Q9NS61 270 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 TCF19Q9Y242 345 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 SRRM4A7MD48 611 aaKnown RBP8.07□□□□□ -1.12
MSH2-202ENST00000406134 ITGB1BP1O14713 200 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 NDUFB4O95168 129 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 LINC00869P0C866 280 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 GATA4P43694 442 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 ZNF83P51522 516 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 FAM3BP58499 235 aaPredicted RBP8.07□□□□□ -1.12
MSH2-202ENST00000406134 JOSD1Q15040 202 aaPredicted RBP8.07□□□□□ -1.12
MSH2-202ENST00000406134 ACOT6Q3I5F7 207 aaPredicted RBP8.07□□□□□ -1.12
MSH2-202ENST00000406134 DEFB124Q8NES8 71 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 FAM122AQ96E09 287 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 GAFA1Q96PS6 74 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 FOXA2Q9Y261 457 aaPredicted RBP8.07□□□□□ -1.12
MSH2-202ENST00000406134 PXMP4Q9Y6I8 212 aa8.07□□□□□ -1.12
MSH2-202ENST00000406134 H7BYZ3 331 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 CCKARP32238 428 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 SRP14P37108 136 aaKnown RBP8.06□□□□□ -1.12
MSH2-202ENST00000406134 PRR20EP86478 221 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 PRR20CP86479 221 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 PRR20DP86480 221 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 PRR20BP86481 221 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 PRR20AP86496 221 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 OR4A47Q6IF82 309 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 MOB3BQ86TA1 216 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 ITLN1Q8WWA0 313 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 GCM1Q9NP62 436 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 TRAV17A0A0B4J275 112 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 A0A1W2PPQ1 181 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 FRMD6-AS1P0C7T7 363 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 GCH1P30793 250 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 CHRNA7P36544 502 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 HLA-DRB5Q30154 266 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 PRAMEF5Q5TYX0 476 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 NEUROG1Q92886 237 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 SARAFQ96BY9 339 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 NEU1Q99519 415 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 NCOR1P1Q9H4R4 102 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 PROCRQ9UNN8 238 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 FUT9Q9Y231 359 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 PLCE1Q9P212 2302 aa8.06□□□□□ -1.12
MSH2-202ENST00000406134 ARFGEF3Q5TH69 2177 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms