RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 NPIPB7O75200 414 aa11.37□□□□□ -0.59
SNED1-205ENST00000405547 NUDT3O95989 172 aa11.37□□□□□ -0.59
SNED1-205ENST00000405547 COX6CP09669 75 aa11.37□□□□□ -0.59
SNED1-205ENST00000405547 RND2P52198 227 aa11.37□□□□□ -0.59
SNED1-205ENST00000405547 PCOLCEQ15113 449 aa11.37□□□□□ -0.59
SNED1-205ENST00000405547 GP6Q9HCN6 339 aa11.37□□□□□ -0.59
SNED1-205ENST00000405547 TMEM56-RWDD3S4R434 201 aa11.37□□□□□ -0.59
SNED1-205ENST00000405547 PLAUP00749 431 aa11.36□□□□□ -0.59
SNED1-205ENST00000405547 ECSCRQ19T08 205 aa11.36□□□□□ -0.59
SNED1-205ENST00000405547 UBE2CO00762 179 aa11.36□□□□□ -0.59
SNED1-205ENST00000405547 C1orf185Q5T7R7 199 aa11.36□□□□□ -0.59
SNED1-205ENST00000405547 OR10J6PQ8NGY7 276 aa11.36□□□□□ -0.59
SNED1-205ENST00000405547 SPSB2Q99619 263 aa11.36□□□□□ -0.59
SNED1-205ENST00000405547 LOC107984156A0A0G2JMH3 177 aa11.36□□□□□ -0.59
SNED1-205ENST00000405547 DNLZQ5SXM8 178 aa11.36□□□□□ -0.59
SNED1-205ENST00000405547 ARL17AQ8IVW1 177 aa11.36□□□□□ -0.59
SNED1-205ENST00000405547 VKORC1L1Q8N0U8 176 aa11.36□□□□□ -0.59
SNED1-205ENST00000405547 SRSF12Q8WXF0 261 aaKnown RBP11.36□□□□□ -0.59
SNED1-205ENST00000405547 C16orf92Q96LL3 132 aa11.36□□□□□ -0.59
SNED1-205ENST00000405547 NEU1Q99519 415 aa11.36□□□□□ -0.59
SNED1-205ENST00000405547 AICDAQ9GZX7 198 aa11.36□□□□□ -0.59
SNED1-205ENST00000405547 PEF1Q9UBV8 284 aaKnown RBP11.36□□□□□ -0.59
SNED1-205ENST00000405547 SLC25A17O43808 307 aa11.36□□□□□ -0.59
SNED1-205ENST00000405547 TBX6O95947 436 aaPredicted RBP11.36□□□□□ -0.59
SNED1-205ENST00000405547 IGKV3-7A0A075B6H7 116 aa11.35□□□□□ -0.59
SNED1-205ENST00000405547 MUC15Q8N387 334 aa11.35□□□□□ -0.59
SNED1-205ENST00000405547 SDF2L1Q9HCN8 221 aa11.35□□□□□ -0.59
SNED1-205ENST00000405547 SNRPCP09234 159 aaKnown RBP11.35□□□□□ -0.59
SNED1-205ENST00000405547 MFAP4P55083 255 aa11.35□□□□□ -0.59
SNED1-205ENST00000405547 J3KRW8 73 aa11.35□□□□□ -0.59
SNED1-205ENST00000405547 RAB9AP51151 201 aa11.35□□□□□ -0.59
SNED1-205ENST00000405547 SHISA5Q8N114 240 aa11.35□□□□□ -0.59
SNED1-205ENST00000405547 FAM106CPP0CH98 169 aa11.35□□□□□ -0.59
SNED1-205ENST00000405547 ZNF600Q6ZNG1 722 aa11.35□□□□□ -0.59
SNED1-205ENST00000405547 TMEM136Q6ZRR5 245 aa11.35□□□□□ -0.59
SNED1-205ENST00000405547 RAB37Q96AX2 223 aa11.35□□□□□ -0.59
SNED1-205ENST00000405547 PATE3B3GLJ2 98 aa11.35□□□□□ -0.59
SNED1-205ENST00000405547 ADRA2AP08913 450 aa11.35□□□□□ -0.59
SNED1-205ENST00000405547 FCGR2BP31994 310 aaPredicted RBP11.35□□□□□ -0.59
SNED1-205ENST00000405547 SLC25A53Q5H9E4 307 aa11.35□□□□□ -0.59
SNED1-205ENST00000405547 TBL2Q9Y4P3 447 aaKnown RBP11.35□□□□□ -0.59
SNED1-205ENST00000405547 PHLDA3Q9Y5J5 127 aa11.35□□□□□ -0.59
SNED1-205ENST00000405547 A0A1W2PS18 150 aa11.34□□□□□ -0.59
SNED1-205ENST00000405547 FGF16O43320 207 aa11.34□□□□□ -0.59
SNED1-205ENST00000405547 PCP4P48539 62 aa11.34□□□□□ -0.59
SNED1-205ENST00000405547 SPRED2Q7Z698 418 aa11.34□□□□□ -0.59
SNED1-205ENST00000405547 TMEM186Q96B77 213 aa11.34□□□□□ -0.59
SNED1-205ENST00000405547 NOTCH4Q99466 2003 aa11.34□□□□□ -0.59
SNED1-205ENST00000405547 GAS1P54826 345 aa11.34□□□□□ -0.59
SNED1-205ENST00000405547 JOSD1Q15040 202 aaPredicted RBP11.34□□□□□ -0.59
SNED1-205ENST00000405547 WFIKKN1Q96NZ8 548 aa11.34□□□□□ -0.59
SNED1-205ENST00000405547 RAMP1O60894 148 aa11.34□□□□□ -0.59
SNED1-205ENST00000405547 SAP25Q8TEE9 199 aa11.34□□□□□ -0.59
SNED1-205ENST00000405547 FOXJ2Q9P0K8 574 aa11.34□□□□□ -0.59
SNED1-205ENST00000405547 CHCHD2Q9Y6H1 151 aaPredicted RBP11.34□□□□□ -0.59
SNED1-205ENST00000405547 TMEM131Q92545 1883 aa11.34□□□□□ -0.59
SNED1-205ENST00000405547 PLXNA2O75051 1894 aa11.34□□□□□ -0.59
SNED1-205ENST00000405547 SS18L1O75177 396 aaPredicted RBP11.34□□□□□ -0.59
SNED1-205ENST00000405547 ATOH7Q8N100 152 aa11.34□□□□□ -0.59
SNED1-205ENST00000405547 SLC25A28Q96A46 364 aa11.34□□□□□ -0.59
SNED1-205ENST00000405547 C18orf12Q96KH6 178 aa11.34□□□□□ -0.59
SNED1-205ENST00000405547 C1QTNF5Q9BXJ0 243 aa11.34□□□□□ -0.59
SNED1-205ENST00000405547 HERPUD1Q15011 391 aa11.34□□□□□ -0.59
SNED1-205ENST00000405547 DNM1P46Q6ZS02 220 aa11.34□□□□□ -0.59
SNED1-205ENST00000405547 IGKV3D-11A0A0A0MRZ8 115 aa11.34□□□□□ -0.59
SNED1-205ENST00000405547 PSMG4Q5JS54 123 aa11.34□□□□□ -0.59
SNED1-205ENST00000405547 MTURNQ8N3F0 131 aa11.34□□□□□ -0.59
SNED1-205ENST00000405547 REPIN1Q9BWE0 567 aaKnown RBP11.33□□□□□ -0.6
SNED1-205ENST00000405547 ZNF256Q9Y2P7 627 aaPredicted RBP11.33□□□□□ -0.6
SNED1-205ENST00000405547 SYT8Q8NBV8 401 aa11.33□□□□□ -0.6
SNED1-205ENST00000405547 RABAC1Q9UI14 185 aa11.33□□□□□ -0.6
SNED1-205ENST00000405547 IGKV1D-43A0A0B4J1Z2 117 aa11.33□□□□□ -0.6
SNED1-205ENST00000405547 FREM1Q5H8C1 2179 aa11.33□□□□□ -0.6
SNED1-205ENST00000405547 C2orf83Q53S99 150 aa11.33□□□□□ -0.6
SNED1-205ENST00000405547 DENND4CQ5VZ89 1909 aa11.33□□□□□ -0.6
SNED1-205ENST00000405547 TBR1Q16650 682 aa11.33□□□□□ -0.6
SNED1-205ENST00000405547 LINC00469Q8N7U9 141 aa11.33□□□□□ -0.6
SNED1-205ENST00000405547 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.33□□□□□ -0.6
SNED1-205ENST00000405547 HTN1P15515 57 aa11.33□□□□□ -0.6
SNED1-205ENST00000405547 Q6ZT83 130 aa11.33□□□□□ -0.6
SNED1-205ENST00000405547 C17orf51A8MQB3 221 aa11.32□□□□□ -0.6
SNED1-205ENST00000405547 LINC00305Q7Z4B0 112 aa11.32□□□□□ -0.6
SNED1-205ENST00000405547 MIEN1Q9BRT3 115 aa11.32□□□□□ -0.6
SNED1-205ENST00000405547 GDF9O60383 454 aa11.32□□□□□ -0.6
SNED1-205ENST00000405547 ICAM4Q14773 271 aa11.32□□□□□ -0.6
SNED1-205ENST00000405547 SOX21Q9Y651 276 aaPredicted RBP11.32□□□□□ -0.6
SNED1-205ENST00000405547 COPS9Q8WXC6 57 aa11.32□□□□□ -0.6
SNED1-205ENST00000405547 SAPCD1Q5SSQ6 148 aa11.32□□□□□ -0.6
SNED1-205ENST00000405547 DMRTA1Q5VZB9 504 aa11.32□□□□□ -0.6
SNED1-205ENST00000405547 PCSK4Q6UW60 755 aa11.32□□□□□ -0.6
SNED1-205ENST00000405547 HILPDAQ9Y5L2 63 aa11.32□□□□□ -0.6
SNED1-205ENST00000405547 DYSFO75923 2080 aa11.32□□□□□ -0.6
SNED1-205ENST00000405547 ALPK3Q96L96 1907 aa11.32□□□□□ -0.6
SNED1-205ENST00000405547 TM4SF5O14894 197 aa11.32□□□□□ -0.6
SNED1-205ENST00000405547 EGR1P18146 543 aa11.32□□□□□ -0.6
SNED1-205ENST00000405547 TM4SF20Q53R12 229 aa11.32□□□□□ -0.6
SNED1-205ENST00000405547 OR9G1Q8NH87 305 aa11.32□□□□□ -0.6
SNED1-205ENST00000405547 OPN3Q9H1Y3 402 aaPredicted RBP11.32□□□□□ -0.6
SNED1-205ENST00000405547 PILRBQ9UKJ0 227 aa11.32□□□□□ -0.6
SNED1-205ENST00000405547 LINC00587B1AMM8 73 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms