RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 C3orf85A0A1B0GTC6 90 aa11.35□□□□□ -0.59
CDPF1-203ENST00000404583 HMX3A6NHT5 357 aa11.35□□□□□ -0.59
CDPF1-203ENST00000404583 PF4P02776 101 aa11.35□□□□□ -0.59
CDPF1-203ENST00000404583 HLA-GP17693 338 aa11.35□□□□□ -0.59
CDPF1-203ENST00000404583 CD40LGP29965 261 aa11.35□□□□□ -0.59
CDPF1-203ENST00000404583 RPL27AP46776 148 aaKnown RBP11.35□□□□□ -0.59
CDPF1-203ENST00000404583 SURF2Q15527 256 aaPredicted RBP11.35□□□□□ -0.59
CDPF1-203ENST00000404583 SP6Q3SY56 376 aa11.35□□□□□ -0.59
CDPF1-203ENST00000404583 DUX3Q96PT4 197 aa11.35□□□□□ -0.59
CDPF1-203ENST00000404583 FYTTD1Q96QD9 318 aaKnown RBP11.35□□□□□ -0.59
CDPF1-203ENST00000404583 SPIN2AQ99865 258 aa11.35□□□□□ -0.59
CDPF1-203ENST00000404583 SPIN2BQ9BPZ2 258 aa11.35□□□□□ -0.59
CDPF1-203ENST00000404583 GNB4Q9HAV0 340 aa11.35□□□□□ -0.59
CDPF1-203ENST00000404583 VSIG4Q9Y279 399 aa11.35□□□□□ -0.59
CDPF1-203ENST00000404583 A0A1B0GW64 132 aa11.34□□□□□ -0.59
CDPF1-203ENST00000404583 H0Y980 276 aa11.34□□□□□ -0.59
CDPF1-203ENST00000404583 SERPINE2P07093 398 aa11.34□□□□□ -0.59
CDPF1-203ENST00000404583 OR9G9P0C7N8 305 aa11.34□□□□□ -0.59
CDPF1-203ENST00000404583 TPPP2P59282 170 aa11.34□□□□□ -0.59
CDPF1-203ENST00000404583 DEFB136Q30KP8 78 aa11.34□□□□□ -0.59
CDPF1-203ENST00000404583 TRIQKQ629K1 86 aa11.34□□□□□ -0.59
CDPF1-203ENST00000404583 ETV3LQ6ZN32 361 aa11.34□□□□□ -0.59
CDPF1-203ENST00000404583 SEC22AQ96IW7 307 aa11.34□□□□□ -0.59
CDPF1-203ENST00000404583 UBE2E2Q96LR5 201 aa11.34□□□□□ -0.59
CDPF1-203ENST00000404583 OR5B12Q96R08 314 aa11.34□□□□□ -0.59
CDPF1-203ENST00000404583 COA4Q9NYJ1 87 aa11.34□□□□□ -0.59
CDPF1-203ENST00000404583 NSG2Q9Y328 171 aa11.34□□□□□ -0.59
CDPF1-203ENST00000404583 TEX13DA0A0J9YY54 714 aaPredicted RBP11.33□□□□□ -0.6
CDPF1-203ENST00000404583 CGB1A6NKQ9 187 aa11.33□□□□□ -0.6
CDPF1-203ENST00000404583 TEX22C9J3V5 150 aa11.33□□□□□ -0.6
CDPF1-203ENST00000404583 TRGV3P03979 118 aa11.33□□□□□ -0.6
CDPF1-203ENST00000404583 SLC6A1P30531 599 aa11.33□□□□□ -0.6
CDPF1-203ENST00000404583 INPP1P49441 399 aa11.33□□□□□ -0.6
CDPF1-203ENST00000404583 ADAD2Q8NCV1 583 aaKnown RBP11.33□□□□□ -0.6
CDPF1-203ENST00000404583 C4orf3Q8WVX3 66 aa11.33□□□□□ -0.6
CDPF1-203ENST00000404583 RAX2Q96IS3 184 aa11.33□□□□□ -0.6
CDPF1-203ENST00000404583 SCGB3A2Q96PL1 93 aa11.33□□□□□ -0.6
CDPF1-203ENST00000404583 NOTCH3Q9UM47 2321 aa11.32□□□□□ -0.6
CDPF1-203ENST00000404583 LINC00854A0A1B0GVQ3 168 aa11.32□□□□□ -0.6
CDPF1-203ENST00000404583 CCL24O00175 119 aa11.32□□□□□ -0.6
CDPF1-203ENST00000404583 OR5AC1P0C628 307 aa11.32□□□□□ -0.6
CDPF1-203ENST00000404583 CADM3Q8N126 398 aa11.32□□□□□ -0.6
CDPF1-203ENST00000404583 TTC9CQ8N5M4 171 aa11.32□□□□□ -0.6
CDPF1-203ENST00000404583 DEDD2Q8WXF8 326 aa11.32□□□□□ -0.6
CDPF1-203ENST00000404583 TMEM230Q96A57 120 aa11.32□□□□□ -0.6
CDPF1-203ENST00000404583 CCDC32Q9BV29 185 aa11.32□□□□□ -0.6
CDPF1-203ENST00000404583 COMMD5Q9GZQ3 224 aa11.32□□□□□ -0.6
CDPF1-203ENST00000404583 SLA2Q9H6Q3 261 aa11.32□□□□□ -0.6
CDPF1-203ENST00000404583 NAA60Q9H7X0 242 aa11.32□□□□□ -0.6
CDPF1-203ENST00000404583 TEX50A0A1B0GTY4 177 aa11.31□□□□□ -0.6
CDPF1-203ENST00000404583 CRYM-AS1A6NIL9 109 aa11.31□□□□□ -0.6
CDPF1-203ENST00000404583 H3BUA1 57 aa11.31□□□□□ -0.6
CDPF1-203ENST00000404583 I3L521 148 aa11.31□□□□□ -0.6
CDPF1-203ENST00000404583 SNAPC5O75971 98 aa11.31□□□□□ -0.6
CDPF1-203ENST00000404583 IGHV3-11P01762 117 aa11.31□□□□□ -0.6
CDPF1-203ENST00000404583 PRH1P02810 166 aa11.31□□□□□ -0.6
CDPF1-203ENST00000404583 IL7P13232 177 aa11.31□□□□□ -0.6
CDPF1-203ENST00000404583 UCP1P25874 307 aa11.31□□□□□ -0.6
CDPF1-203ENST00000404583 MYCNOSP40205 109 aa11.31□□□□□ -0.6
CDPF1-203ENST00000404583 OR2B8PP59922 312 aa11.31□□□□□ -0.6
CDPF1-203ENST00000404583 DEFA5Q01523 94 aa11.31□□□□□ -0.6
CDPF1-203ENST00000404583 TRIM16LQ309B1 348 aa11.31□□□□□ -0.6
CDPF1-203ENST00000404583 H2BFWTQ7Z2G1 175 aa11.31□□□□□ -0.6
CDPF1-203ENST00000404583 MRPL41Q8IXM3 137 aaKnown RBP11.31□□□□□ -0.6
CDPF1-203ENST00000404583 OR11H1Q8NG94 326 aa11.31□□□□□ -0.6
CDPF1-203ENST00000404583 P2RX4Q99571 388 aa11.31□□□□□ -0.6
CDPF1-203ENST00000404583 ALX4Q9H161 411 aaPredicted RBP11.31□□□□□ -0.6
CDPF1-203ENST00000404583 DBX1A6NMT0 343 aa11.3□□□□□ -0.6
CDPF1-203ENST00000404583 RBMXL2O75526 392 aaKnown RBP11.3□□□□□ -0.6
CDPF1-203ENST00000404583 IGKV1-5P01602 117 aa11.3□□□□□ -0.6
CDPF1-203ENST00000404583 FGF2P09038 288 aa11.3□□□□□ -0.6
CDPF1-203ENST00000404583 AREGP15514 252 aa11.3□□□□□ -0.6
CDPF1-203ENST00000404583 AKR1C4P17516 323 aa11.3□□□□□ -0.6
CDPF1-203ENST00000404583 CD33P20138 364 aa11.3□□□□□ -0.6
CDPF1-203ENST00000404583 IZUMO4Q1ZYL8 232 aa11.3□□□□□ -0.6
CDPF1-203ENST00000404583 C19orf35Q6ZS72 473 aa11.3□□□□□ -0.6
CDPF1-203ENST00000404583 SLC25A42Q86VD7 318 aa11.3□□□□□ -0.6
CDPF1-203ENST00000404583 LINC00482Q8N8I6 264 aa11.3□□□□□ -0.6
CDPF1-203ENST00000404583 WFDC9Q8NEX5 89 aa11.3□□□□□ -0.6
CDPF1-203ENST00000404583 GLYATL2Q8WU03 294 aa11.3□□□□□ -0.6
CDPF1-203ENST00000404583 TMEM222Q9H0R3 208 aa11.3□□□□□ -0.6
CDPF1-203ENST00000404583 OR51B2Q9Y5P1 312 aa11.3□□□□□ -0.6
CDPF1-203ENST00000404583 PRKDCP78527 4128 aaKnown RBP11.29□□□□□ -0.6
CDPF1-203ENST00000404583 B3GALNT1O75752 331 aa11.29□□□□□ -0.6
CDPF1-203ENST00000404583 BRI3O95415 125 aa11.29□□□□□ -0.6
CDPF1-203ENST00000404583 CDS2O95674 445 aa11.29□□□□□ -0.6
CDPF1-203ENST00000404583 REG1AP05451 166 aa11.29□□□□□ -0.6
CDPF1-203ENST00000404583 CCR6P51684 374 aa11.29□□□□□ -0.6
CDPF1-203ENST00000404583 RUNX1Q01196 453 aa11.29□□□□□ -0.6
CDPF1-203ENST00000404583 DEFA6Q01524 100 aa11.29□□□□□ -0.6
CDPF1-203ENST00000404583 SGPP2Q8IWX5 399 aa11.29□□□□□ -0.6
CDPF1-203ENST00000404583 OR10W1Q8NGF6 305 aa11.29□□□□□ -0.6
CDPF1-203ENST00000404583 OR1L8Q8NGR8 309 aa11.29□□□□□ -0.6
CDPF1-203ENST00000404583 OR4A16Q8NH70 328 aa11.29□□□□□ -0.6
CDPF1-203ENST00000404583 LHFPL5Q8TAF8 219 aa11.29□□□□□ -0.6
CDPF1-203ENST00000404583 SLC25A21Q9BQT8 299 aaPredicted RBP11.29□□□□□ -0.6
CDPF1-203ENST00000404583 QTRT1Q9BXR0 403 aaKnown RBP11.29□□□□□ -0.6
CDPF1-203ENST00000404583 PRNDQ9UKY0 176 aa11.29□□□□□ -0.6
CDPF1-203ENST00000404583 C13orf42A0A1B0GVH6 325 aa11.28□□□□□ -0.6
CDPF1-203ENST00000404583 IGLC7A0M8Q6 106 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms