RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 ARL17AQ8IVW1 177 aa10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 OR11H4Q8NGC9 324 aa10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 TMEM70Q9BUB7 260 aa10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 TRAV14DV4A0A0A6YYC5 116 aa10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 RPL35AP18077 110 aaKnown RBP10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 VAX1Q5SQQ9 334 aa10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 CLRN3Q8NCR9 226 aa10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 HIST1H4GQ99525 98 aa10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 E9PQ18 207 aa10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 FAM90A1Q86YD7 464 aa10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 NPIPB8E9PQR5 432 aa10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 SLC25A16P16260 332 aa10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 LHX2P50458 406 aa10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 IGLV3-21P80748 117 aaPredicted RBP10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 RUNX1Q01196 453 aa10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 GPHA2Q96T91 129 aa10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 IQCF6A8MYZ5 107 aa10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 NPIPB9F8W1W9 429 aa10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 H3BQ15 152 aa10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 NPIPB7O75200 414 aa10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 WDR82Q6UXN9 313 aa10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 NXT2Q9NPJ8 142 aaKnown RBP10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 MSGN1A6NI15 193 aa10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 C4orf51C9J302 202 aa10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 APCDD1LQ8NCL9 501 aa10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 PRELID3AQ96N28 172 aa10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 AMELYQ99218 206 aa10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 RBMY1BA6NDE4 496 aaKnown RBP10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 RBMY1EA6NEQ0 496 aaKnown RBP10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 RBMY1DP0C7P1 496 aaKnown RBP10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 RBMY1A1P0DJD3 496 aaKnown RBP10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 RBMY1CP0DJD4 496 aa10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 KLK2P20151 261 aa10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 TAF15Q92804 592 aaKnown RBP eCLIP10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 NABP2Q9BQ15 211 aa10.19□□□□□ -0.78
CACNA1C-213ENST00000399629 C7orf71A4D174 169 aa10.18□□□□□ -0.78
CACNA1C-213ENST00000399629 CD7P09564 240 aa10.18□□□□□ -0.78
CACNA1C-213ENST00000399629 WFIKKN1Q96NZ8 548 aa10.18□□□□□ -0.78
CACNA1C-213ENST00000399629 CD24P25063 80 aa10.18□□□□□ -0.78
CACNA1C-213ENST00000399629 CNTFRP26992 372 aa10.18□□□□□ -0.78
CACNA1C-213ENST00000399629 LY75O60449 1722 aa10.18□□□□□ -0.78
CACNA1C-213ENST00000399629 TRAV20A0A0B4J274 112 aa10.18□□□□□ -0.78
CACNA1C-213ENST00000399629 C7orf66A4D0T2 115 aa10.18□□□□□ -0.78
CACNA1C-213ENST00000399629 EIF3GO75821 320 aaKnown RBP eCLIP10.18□□□□□ -0.78
CACNA1C-213ENST00000399629 UBE2V2Q15819 145 aa10.18□□□□□ -0.78
CACNA1C-213ENST00000399629 TP53RKQ96S44 253 aa10.18□□□□□ -0.78
CACNA1C-213ENST00000399629 ST6GAL2Q96JF0 529 aa10.18□□□□□ -0.78
CACNA1C-213ENST00000399629 RBBP6Q7Z6E9 1792 aaKnown RBP10.18□□□□□ -0.78
CACNA1C-213ENST00000399629 PTPRZ1P23471 2315 aaPredicted RBP10.18□□□□□ -0.78
CACNA1C-213ENST00000399629 TRAV24A0A0B4J272 114 aa10.18□□□□□ -0.78
CACNA1C-213ENST00000399629 PSG7Q13046 419 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 ZNF818PQ6ZRF7 136 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 Q71RC1 249 aaPredicted RBP10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 OR4D5Q8NGN0 318 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 PRADC1Q9BSG0 188 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 TDRD6O60522 2096 aaKnown RBP10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 EREGO14944 169 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 CCL3L1P16619 93 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 LIMS1P48059 325 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 TMEM170BQ5T4T1 132 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 IMMP1LQ96LU5 166 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 Q96M66 194 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 PRO1933Q9H354 126 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 CDK2AP2O75956 126 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 SEC11BP0C7V7 166 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 BCL2P10415 239 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 ATP5IP56385 69 aaPredicted RBP10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 MRPL14Q6P1L8 145 aaKnown RBP10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 TMEM133Q9H2Q1 129 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 SLC25A20O43772 301 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 Q5PR19 223 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 Q96MF0 132 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 IGHV1-18A0A0C4DH31 117 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 NPIPB4C9JG80 1138 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 IL18BPO95998 194 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 EGR1P18146 543 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 CRYBB3P26998 211 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 RHOGP84095 191 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 ZFP36L1Q07352 338 aaKnown RBP10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 ZNF672Q499Z4 452 aaPredicted RBP10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 ABLIM2Q6H8Q1 611 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 ZCCHC24Q8N2G6 241 aaKnown RBP10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 IFI27L2Q9H2X8 130 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 DIRC3C9JPN6 131 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 Q0VFX4 171 aa10.17□□□□□ -0.78
CACNA1C-213ENST00000399629 IGF2P01344 180 aa10.16□□□□□ -0.78
CACNA1C-213ENST00000399629 FUT5Q11128 374 aa10.16□□□□□ -0.78
CACNA1C-213ENST00000399629 ADAMTS7Q9UKP4 1686 aa10.16□□□□□ -0.78
CACNA1C-213ENST00000399629 IGKV3D-20A0A0C4DH25 116 aa10.16□□□□□ -0.78
CACNA1C-213ENST00000399629 ERVH48-1M5A8F1 160 aa10.16□□□□□ -0.78
CACNA1C-213ENST00000399629 KLHL30-AS1Q8NEE0 82 aa10.16□□□□□ -0.78
CACNA1C-213ENST00000399629 RNF223E7ERA6 249 aa10.16□□□□□ -0.78
CACNA1C-213ENST00000399629 TMEM252Q8N6L7 170 aa10.16□□□□□ -0.78
CACNA1C-213ENST00000399629 BMPERQ8N8U9 685 aa10.16□□□□□ -0.78
CACNA1C-213ENST00000399629 RNF166Q96A37 237 aaPredicted RBP10.16□□□□□ -0.78
CACNA1C-213ENST00000399629 SPSB4Q96A44 273 aa10.16□□□□□ -0.78
CACNA1C-213ENST00000399629 NUDT11Q96G61 164 aa10.16□□□□□ -0.78
CACNA1C-213ENST00000399629 C12orf57Q99622 126 aa10.16□□□□□ -0.78
CACNA1C-213ENST00000399629 FAM71F2Q6NXP2 309 aa10.16□□□□□ -0.78
CACNA1C-213ENST00000399629 RAMP1O60894 148 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms