RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 LIPFP07098 398 aa7.86□□□□□ -1.15
COL28A1-201ENST00000399429 ADH4P08319 380 aa7.86□□□□□ -1.15
COL28A1-201ENST00000399429 OPRK1P41145 380 aa7.86□□□□□ -1.15
COL28A1-201ENST00000399429 RAC1P63000 192 aa7.86□□□□□ -1.15
COL28A1-201ENST00000399429 IGFBP7Q16270 282 aa7.86□□□□□ -1.15
COL28A1-201ENST00000399429 CEACAM21Q3KPI0 293 aa7.86□□□□□ -1.15
COL28A1-201ENST00000399429 ZNF788Q6ZQV5 615 aa7.86□□□□□ -1.15
COL28A1-201ENST00000399429 HAPLN4Q86UW8 402 aa7.86□□□□□ -1.15
COL28A1-201ENST00000399429 PDPNQ86YL7 162 aa7.86□□□□□ -1.15
COL28A1-201ENST00000399429 FER1L6-AS1Q8NA97 138 aa7.86□□□□□ -1.15
COL28A1-201ENST00000399429 AGBL5Q8NDL9 886 aa7.86□□□□□ -1.15
COL28A1-201ENST00000399429 MS4A5Q9H3V2 200 aa7.86□□□□□ -1.15
COL28A1-201ENST00000399429 ST20Q9HBF5 79 aa7.86□□□□□ -1.15
COL28A1-201ENST00000399429 OBP2AQ9NY56 170 aa7.86□□□□□ -1.15
COL28A1-201ENST00000399429 AMMECR1Q9Y4X0 333 aaPredicted RBP7.86□□□□□ -1.15
COL28A1-201ENST00000399429 BPTFQ12830 3046 aa7.86□□□□□ -1.15
COL28A1-201ENST00000399429 IGKV1-5P01602 117 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 SP1P08047 785 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 TM4SF4P48230 202 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 CEBPDP49716 269 aaPredicted RBP7.85□□□□□ -1.15
COL28A1-201ENST00000399429 HIST1H1AQ02539 215 aaPredicted RBP7.85□□□□□ -1.15
COL28A1-201ENST00000399429 Q0VG73 95 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 SCCPDHQ8NBX0 429 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 DEFB108BQ8NET1 73 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 OR10W1Q8NGF6 305 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 RCHY1Q96PM5 261 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 OCIAD1Q9NX40 245 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 VSTM5A8MXK1 200 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 OR2H2O95918 312 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 SCGB1C2P0DMR2 95 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 ARR3P36575 388 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 RPL15P61313 204 aaKnown RBP7.85□□□□□ -1.15
COL28A1-201ENST00000399429 TMEM92Q6UXU6 159 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 CNEP1R1Q8N9A8 125 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 ZC2HC1AQ96GY0 325 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 GP6Q9HCN6 339 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 IL36GQ9NZH8 169 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 RNF115Q9Y4L5 304 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 OR51B2Q9Y5P1 312 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 FAM90A10PA6NDY2 464 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 FAM90A18PA6NE21 464 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 FAM90A16PA6NEW6 464 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 FAM90A20PA6NIJ5 464 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 FAM90A8PA6NJQ4 464 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 FAM90A7PA6NKC0 464 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 C17orf98A8MV24 154 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 HIGD1CA8MV81 97 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 FAM90A22PA8MWA6 464 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 FAM90A12PA8MX19 464 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 FAM90A5PA8MXJ8 464 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 FAM90A23PA8MXZ1 464 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 C3orf80F5H4A9 247 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 FAM90A15PP0C7V4 464 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 FAM90A13PP0C7W8 464 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 FAM90A14PP0C7W9 464 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 FAM90A24PP0C7X0 464 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 GABRG2P18507 467 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 FOLR3P41439 243 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 RAC3P60763 192 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 CKS1BP61024 79 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 YPEL3P61236 119 aaPredicted RBP7.85□□□□□ -1.15
COL28A1-201ENST00000399429 Q8IYB0 196 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 PLXNA4Q9HCM2 1894 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 UTRNP46939 3433 aa7.85□□□□□ -1.15
COL28A1-201ENST00000399429 PLXNA3P51805 1871 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 A0A1W2PPC4 97 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 KLF7O75840 302 aaPredicted RBP7.84□□□□□ -1.15
COL28A1-201ENST00000399429 OR2J3O76001 311 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 CLDN14O95500 239 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 SMIM13P0DJ93 91 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 GATA2P23769 480 aaPredicted RBP7.84□□□□□ -1.15
COL28A1-201ENST00000399429 ZFP36L1Q07352 338 aaKnown RBP7.84□□□□□ -1.15
COL28A1-201ENST00000399429 ABHD17BQ5VST6 288 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 MIR17HGQ75NE6 70 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 BHLHA15Q7RTS1 189 aaPredicted RBP7.84□□□□□ -1.15
COL28A1-201ENST00000399429 PERPQ96FX8 193 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 HES4Q9HCC6 221 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 AP5S1Q9NUS5 200 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 ROS1P08922 2347 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 TMSB15BA0A087X1C1 80 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 FAM231BA6NCW3 169 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 IZUMO1RA6ND01 250 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 H3BVH4 76 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 LGALS4P56470 323 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 PLGLAQ15195 96 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 TMEM136Q6ZRR5 245 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 ZNF645Q8N7E2 425 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 ZBTB34Q8NCN2 500 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 NABP2Q9BQ15 211 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 A0A0G2JLM5 398 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 A6NCN8 305 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 CCL3P10147 92 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 SLC22A18ASQ8N1D0 253 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 MPC1Q9Y5U8 109 aa7.84□□□□□ -1.15
COL28A1-201ENST00000399429 ABCA7Q8IZY2 2146 aa7.84□□□□□ -1.16
COL28A1-201ENST00000399429 IGHV2-26A0A0B4J1V2 119 aa7.83□□□□□ -1.16
COL28A1-201ENST00000399429 J3QT63 122 aa7.83□□□□□ -1.16
COL28A1-201ENST00000399429 KIR2DL1P43626 348 aaPredicted RBP7.83□□□□□ -1.16
COL28A1-201ENST00000399429 TMEM177Q53S58 311 aa7.83□□□□□ -1.16
COL28A1-201ENST00000399429 TNFRSF14Q92956 283 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms