RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 J3QT63 122 aa7.97□□□□□ -1.13
ATL3-201ENST00000398868 RPL27AP46776 148 aaKnown RBP7.97□□□□□ -1.13
ATL3-201ENST00000398868 GPX1P07203 203 aa7.97□□□□□ -1.13
ATL3-201ENST00000398868 JOSD1Q15040 202 aaPredicted RBP7.97□□□□□ -1.13
ATL3-201ENST00000398868 COX19Q49B96 90 aa7.97□□□□□ -1.13
ATL3-201ENST00000398868 C1QL2Q7Z5L3 287 aa7.97□□□□□ -1.13
ATL3-201ENST00000398868 TMEM183AQ8IXX5 376 aa7.97□□□□□ -1.13
ATL3-201ENST00000398868 VSTM2AQ8TAG5 236 aa7.97□□□□□ -1.13
ATL3-201ENST00000398868 ZNF430Q9H8G1 570 aaPredicted RBP7.97□□□□□ -1.13
ATL3-201ENST00000398868 AHRRA9YTQ3 701 aa7.97□□□□□ -1.13
ATL3-201ENST00000398868 NDUFS6O75380 124 aaKnown RBP7.97□□□□□ -1.13
ATL3-201ENST00000398868 KIR3DL2P43630 455 aa7.97□□□□□ -1.13
ATL3-201ENST00000398868 TNFRSF9Q07011 255 aa7.97□□□□□ -1.13
ATL3-201ENST00000398868 TMEM78Q5T7P6 136 aa7.97□□□□□ -1.13
ATL3-201ENST00000398868 SF3B5Q9BWJ5 86 aaKnown RBP7.97□□□□□ -1.13
ATL3-201ENST00000398868 QTRT1Q9BXR0 403 aaKnown RBP7.97□□□□□ -1.13
ATL3-201ENST00000398868 ST6GALNAC2Q9UJ37 374 aa7.97□□□□□ -1.13
ATL3-201ENST00000398868 CNOT1A5YKK6 2376 aaKnown RBP7.97□□□□□ -1.13
ATL3-201ENST00000398868 FOXI3A8MTJ6 420 aaPredicted RBP7.97□□□□□ -1.13
ATL3-201ENST00000398868 LINC00869P0C866 280 aa7.97□□□□□ -1.13
ATL3-201ENST00000398868 TMEM252Q8N6L7 170 aa7.97□□□□□ -1.13
ATL3-201ENST00000398868 MOB4Q9Y3A3 225 aa7.97□□□□□ -1.13
ATL3-201ENST00000398868 PHLDA3Q9Y5J5 127 aa7.97□□□□□ -1.13
ATL3-201ENST00000398868 MPDZO75970 2070 aa7.97□□□□□ -1.13
ATL3-201ENST00000398868 TRAV21A0A0B4J279 112 aa7.97□□□□□ -1.13
ATL3-201ENST00000398868 HPRT1P00492 218 aa7.97□□□□□ -1.13
ATL3-201ENST00000398868 LRRC75BQ2VPJ9 315 aa7.97□□□□□ -1.13
ATL3-201ENST00000398868 FBLN7Q53RD9 439 aa7.97□□□□□ -1.13
ATL3-201ENST00000398868 GFI1BQ5VTD9 330 aa7.97□□□□□ -1.13
ATL3-201ENST00000398868 LY6HO94772 140 aa7.96□□□□□ -1.13
ATL3-201ENST00000398868 CLEC19AQ6UXS0 136 aa7.96□□□□□ -1.13
ATL3-201ENST00000398868 TMEM219Q86XT9 240 aa7.96□□□□□ -1.13
ATL3-201ENST00000398868 RREB1Q92766 1687 aa7.96□□□□□ -1.13
ATL3-201ENST00000398868 C1QAP02745 245 aa7.96□□□□□ -1.13
ATL3-201ENST00000398868 NGFRP08138 427 aa7.96□□□□□ -1.13
ATL3-201ENST00000398868 NHLRC3Q5JS37 347 aa7.96□□□□□ -1.13
ATL3-201ENST00000398868 CCDC144NLQ6NUI1 221 aa7.96□□□□□ -1.13
ATL3-201ENST00000398868 UNQ9370/PRO34162Q6UXP9 181 aa7.96□□□□□ -1.13
ATL3-201ENST00000398868 ANOS1P23352 680 aa7.96□□□□□ -1.13
ATL3-201ENST00000398868 MPV17P39210 176 aa7.96□□□□□ -1.13
ATL3-201ENST00000398868 FXYD7P58549 80 aa7.96□□□□□ -1.13
ATL3-201ENST00000398868 RPL36A-HNRNPH2H7BZ11 118 aa7.96□□□□□ -1.14
ATL3-201ENST00000398868 RRHO14718 337 aa7.96□□□□□ -1.14
ATL3-201ENST00000398868 RND2P52198 227 aa7.96□□□□□ -1.14
ATL3-201ENST00000398868 CX3CL1P78423 397 aa7.96□□□□□ -1.14
ATL3-201ENST00000398868 C1orf162Q8NEQ5 155 aaPredicted RBP7.96□□□□□ -1.14
ATL3-201ENST00000398868 FBXL15Q9H469 300 aa7.96□□□□□ -1.14
ATL3-201ENST00000398868 ASCL4Q6XD76 172 aa7.96□□□□□ -1.14
ATL3-201ENST00000398868 FAM206AQ9NX38 181 aa7.96□□□□□ -1.14
ATL3-201ENST00000398868 ELOVL5Q9NYP7 299 aa7.96□□□□□ -1.14
ATL3-201ENST00000398868 A0A1W2PPC1 479 aa7.96□□□□□ -1.14
ATL3-201ENST00000398868 TGFBR3LH3BV60 316 aa7.96□□□□□ -1.14
ATL3-201ENST00000398868 SAA1P0DJI8 122 aaPredicted RBP7.96□□□□□ -1.14
ATL3-201ENST00000398868 CD33P20138 364 aa7.96□□□□□ -1.14
ATL3-201ENST00000398868 TSPAN7P41732 249 aa7.96□□□□□ -1.14
ATL3-201ENST00000398868 LSM6P62312 80 aaKnown RBP7.96□□□□□ -1.14
ATL3-201ENST00000398868 SRSF3P84103 164 aaKnown RBP7.96□□□□□ -1.14
ATL3-201ENST00000398868 HYPMO75409 117 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 P2RY4P51582 365 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 NPVFQ9HCQ7 196 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 TOMM7Q9P0U1 55 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 KIAA2026Q5HYC2 2103 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 TAF1LQ8IZX4 1826 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 GREB1Q4ZG55 1949 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 NPC2P61916 151 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 CSRP2Q16527 193 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 SPACA3Q8IXA5 215 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 TEX29Q8N6K0 151 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 FAM181AQ8N9Y4 354 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 ZNF414Q96IQ9 312 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 SIGMAR1Q99720 223 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 KIF13BQ9NQT8 1826 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 LTBP4Q8N2S1 1624 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.95□□□□□ -1.14
ATL3-201ENST00000398868 TAF15Q92804 592 aaKnown RBP eCLIP7.95□□□□□ -1.14
ATL3-201ENST00000398868 PPP1R3EQ9H7J1 279 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 ANKRD36A6QL64 1941 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 HLA-DQA1P01909 254 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 HLA-DQB1P01920 261 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 HMGA2P52926 109 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 SP7Q8TDD2 431 aaPredicted RBP7.95□□□□□ -1.14
ATL3-201ENST00000398868 CDC42EP3Q9UKI2 254 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 ANK1P16157 1881 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 BRCA1P38398 1863 aaKnown RBP7.95□□□□□ -1.14
ATL3-201ENST00000398868 UNC119Q13432 240 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 TMEM155Q4W5P6 130 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 TMEM56-RWDD3S4R434 201 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 RNASE4P34096 147 aaKnown RBP7.95□□□□□ -1.14
ATL3-201ENST00000398868 SUMO2P61956 95 aaKnown RBP7.95□□□□□ -1.14
ATL3-201ENST00000398868 CIRBPQ14011 172 aaKnown RBP7.95□□□□□ -1.14
ATL3-201ENST00000398868 FAM216BQ8N7L0 139 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 GEMIN7Q9H840 131 aaKnown RBP7.95□□□□□ -1.14
ATL3-201ENST00000398868 PRNDQ9UKY0 176 aa7.95□□□□□ -1.14
ATL3-201ENST00000398868 TRBV20OR9-2A0A075B6H5 130 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 APOHP02749 345 aaPredicted RBP7.94□□□□□ -1.14
ATL3-201ENST00000398868 ASAH2BP0C7U1 165 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 GPR183P32249 361 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 CEACAM21Q3KPI0 293 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 CENPWQ5EE01 88 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 GPR82Q96P67 336 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms