RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 C1orf43Q9BWL3 253 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 CALYQ9NYX4 217 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 HIVEP2P31629 2446 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 IGLV3-32A0A0A0MS00 114 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 C5orf52A6NGY3 159 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 PPP6CO00743 305 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 CCSO14618 274 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 CKS2P33552 79 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 HBBP68871 147 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 ZNF56Q15929 161 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 TEX45Q8NA69 505 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 ALX4Q9H161 411 aaPredicted RBP2.33□□□□□ -2.04
CHD9-202ENST00000398510 PGPEP1LA6NFU8 196 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 FNDC10F2Z333 226 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 SNRPBP14678 240 aaKnown RBP2.33□□□□□ -2.04
CHD9-202ENST00000398510 OR10J1P30954 320 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 KIRREL2Q6UWL6 708 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 VKORC1L1Q8N0U8 176 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 C10orf111Q8N326 155 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 LILRA3Q8N6C8 439 aaPredicted RBP2.33□□□□□ -2.04
CHD9-202ENST00000398510 CYB561D1Q8N8Q1 229 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 TMEM37Q8WXS4 190 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 FAM131CQ96AQ9 280 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 RHOVQ96L33 236 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 PGLYRP3Q96LB9 341 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 DUX3Q96PT4 197 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 NEU1Q99519 415 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 MED20Q9H944 212 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 DAZ1Q9NQZ3 744 aaKnown RBP2.33□□□□□ -2.04
CHD9-202ENST00000398510 FCARP24071 287 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 TCL1AP56279 114 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 SRSF4Q08170 494 aaKnown RBP2.33□□□□□ -2.04
CHD9-202ENST00000398510 C9orf40Q8IXQ3 194 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 POC1AQ8NBT0 407 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 OR4D11Q8NGI4 311 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 WFIKKN1Q96NZ8 548 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 SMIM3Q9BZL3 60 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 NDUFA12Q9UI09 145 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 VAX2Q9UIW0 290 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 RBFOX3A6NFN3 312 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 SRSF10O75494 262 aaKnown RBP2.33□□□□□ -2.04
CHD9-202ENST00000398510 IGHV3-9P01782 118 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 SMIM6P0DI80 62 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 IL9P15248 144 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 COL10A1Q03692 680 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 IRF3Q14653 427 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 FOXB2Q5VYV0 432 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 MRM1Q6IN84 353 aaKnown RBP2.33□□□□□ -2.04
CHD9-202ENST00000398510 Q6ZWC4 215 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 OR11H4Q8NGC9 324 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 OR2D3Q8NGH3 330 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 IL21Q9HBE4 155 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 IGHV2OR16-5A0A0B4J2B6 119 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 KBTBD11-OT1A0A1B0GTJ5 212 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 OVOL1O14753 267 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 TMPRSS11DO60235 418 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 ZFPL1O95159 310 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 GYPAP02724 150 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 INAFM2P0DMQ5 153 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 BCL2P10415 239 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 CSRP3P50461 194 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 CKS1BP61024 79 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 OR2T2Q6IF00 324 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 TMEM92Q6UXU6 159 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 RNF182Q8N6D2 247 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 OR9G4Q8NGQ1 327 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 FOXC2Q99958 501 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 EMC6Q9BV81 110 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 TINAGL1Q9GZM7 467 aaPredicted RBP2.33□□□□□ -2.04
CHD9-202ENST00000398510 AICDAQ9GZX7 198 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 C7orf69Q9H7B7 122 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 TMEM272A0A1B0GTI8 110 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 ZNF815PA8K554 130 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 CDIPTO14735 213 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 LINC01565O15544 149 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 APCSP02743 223 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 MGPP08493 103 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 GATA2P23769 480 aaPredicted RBP2.33□□□□□ -2.04
CHD9-202ENST00000398510 RNASEKQ6P5S7 137 aaKnown RBP2.33□□□□□ -2.04
CHD9-202ENST00000398510 NECAP1Q8NC96 275 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 KLF14Q8TD94 323 aaPredicted RBP2.33□□□□□ -2.04
CHD9-202ENST00000398510 PARP12Q9H0J9 701 aaKnown RBP2.33□□□□□ -2.04
CHD9-202ENST00000398510 ARHGAP32A7KAX9 2087 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 C1QTNF9BB2RNN3 333 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 CRLF1O75462 422 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 SCTP09683 121 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 KLK2P20151 261 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 IGLV3-21P80748 117 aaPredicted RBP2.32□□□□□ -2.04
CHD9-202ENST00000398510 DMRTA1Q5VZB9 504 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 PAQR9Q6ZVX9 377 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 SPACA3Q8IXA5 215 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 SELLP14151 372 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 CXCL2P19875 107 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 GNG10P50151 68 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 CTAG1AP78358 180 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 CD200R1LQ6Q8B3 271 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 DEFB108BQ8NET1 73 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 SLC25A2Q9BXI2 301 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 MMP28Q9H239 520 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 TNFRSF19Q9NS68 423 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms