RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 CLPSP04118 112 aa9.34□□□□□ -0.91
HPS4-202ENST00000398145 OR4A8P0C604 315 aa9.34□□□□□ -0.91
HPS4-202ENST00000398145 APELAP0DMC3 54 aa9.34□□□□□ -0.91
HPS4-202ENST00000398145 ADMP35318 185 aa9.34□□□□□ -0.91
HPS4-202ENST00000398145 ZNF146Q15072 292 aa9.34□□□□□ -0.91
HPS4-202ENST00000398145 WDR31Q8NA23 367 aa9.34□□□□□ -0.91
HPS4-202ENST00000398145 NCOR1O75376 2440 aa9.34□□□□□ -0.91
HPS4-202ENST00000398145 DIDO1Q9BTC0 2240 aaKnown RBP9.34□□□□□ -0.91
HPS4-202ENST00000398145 MKRN2OSH3BPM6 223 aa9.34□□□□□ -0.91
HPS4-202ENST00000398145 LINC00271P0C7V0 271 aa9.34□□□□□ -0.91
HPS4-202ENST00000398145 ZNF324BQ6AW86 544 aaPredicted RBP9.34□□□□□ -0.91
HPS4-202ENST00000398145 FAM19A2Q8N3H0 131 aa9.34□□□□□ -0.91
HPS4-202ENST00000398145 SNRNP40Q96DI7 357 aaKnown RBP9.34□□□□□ -0.91
HPS4-202ENST00000398145 SLC25A33Q9BSK2 321 aa9.34□□□□□ -0.91
HPS4-202ENST00000398145 MRPL32Q9BYC8 188 aaKnown RBP9.34□□□□□ -0.91
HPS4-202ENST00000398145 TNFRSF19Q9NS68 423 aa9.34□□□□□ -0.91
HPS4-202ENST00000398145 SPTBN2O15020 2390 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 C5orf63A6NC05 138 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 PGPEP1LA6NFU8 196 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 WNT9BO14905 357 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 IGHV2-5P01817 119 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 SMIM17P0DL12 118 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 FOXA3P55318 350 aaPredicted RBP9.33□□□□□ -0.92
HPS4-202ENST00000398145 LYRM7Q5U5X0 104 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 PCSK4Q6UW60 755 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 CCL13Q99616 98 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 MESP1Q9BRJ9 268 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 PNRC2Q9NPJ4 139 aaKnown RBP9.33□□□□□ -0.92
HPS4-202ENST00000398145 DOCK9Q9BZ29 2069 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 IGKV1-27A0A075B6S5 117 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 IGHV3-21A0A0B4J1V1 117 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 LOC389332A0A1B0GUA5 103 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 RPL27AP46776 148 aaKnown RBP9.33□□□□□ -0.92
HPS4-202ENST00000398145 C1orf194Q5T5A4 169 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 KLF2Q9Y5W3 355 aaPredicted RBP9.33□□□□□ -0.92
HPS4-202ENST00000398145 SCN5AQ14524 2016 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 LRRK1Q38SD2 2015 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 IFNL4K9M1U5 179 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 PMS2CLQ68D20 193 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 SPSB3Q6PJ21 355 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 LEAP2Q969E1 77 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 FAM131CQ96AQ9 280 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 IMMP1LQ96LU5 166 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 SGK494Q96LW2 274 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 EP300Q09472 2414 aaPredicted RBP9.33□□□□□ -0.92
HPS4-202ENST00000398145 LIPFP07098 398 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 OCC1Q8TAD7 63 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 KCNS1Q96KK3 526 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 SCNM1Q9BWG6 230 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 ONECUT1Q9UBC0 465 aa9.33□□□□□ -0.92
HPS4-202ENST00000398145 TRAV24A0A0B4J272 114 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 GZMBP10144 247 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 FABP2P12104 132 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 CEACAM3P40198 252 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 PLP1P60201 277 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 HBBP68871 147 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 SRSF7Q16629 238 aaKnown RBP eCLIP9.32□□□□□ -0.92
HPS4-202ENST00000398145 ZNF664Q8N3J9 261 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 MAFAQ8NHW3 353 aaPredicted RBP9.32□□□□□ -0.92
HPS4-202ENST00000398145 PLPPR1Q8TBJ4 325 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 NABP1Q96AH0 204 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 HES7Q9BYE0 225 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 SLC25A10Q9UBX3 287 aaPredicted RBP9.32□□□□□ -0.92
HPS4-202ENST00000398145 WDR83OSQ9Y284 106 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 SHANK1Q9Y566 2161 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 NUDT3O95989 172 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 TCTAP57738 103 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 Q1RN00 199 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 CDCP2Q5VXM1 449 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 TEX38Q6PEX7 206 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 OR10AG1Q8NH19 301 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 ITLN1Q8WWA0 313 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 HSPB7Q9UBY9 170 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 UFC1Q9Y3C8 167 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 TRPM7Q96QT4 1865 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 DOCK11Q5JSL3 2073 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 TNFSF13O75888 250 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 IGFBP2P18065 325 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 RPL39P5Q59GN2 51 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 FAM90A2PQ658T7 463 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 HCP5Q6MZN7 132 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 PPP1R32Q7Z5V6 425 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 C1orf210Q8IVY1 113 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 NPIPB3Q92617 1050 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 DOCK7Q96N67 2140 aa9.32□□□□□ -0.92
HPS4-202ENST00000398145 MC5RP33032 325 aa9.31□□□□□ -0.92
HPS4-202ENST00000398145 COMPP49747 757 aaPredicted RBP9.31□□□□□ -0.92
HPS4-202ENST00000398145 FOXL1Q12952 345 aa9.31□□□□□ -0.92
HPS4-202ENST00000398145 MRPL14Q6P1L8 145 aaKnown RBP9.31□□□□□ -0.92
HPS4-202ENST00000398145 SCGB1D4Q6XE38 83 aa9.31□□□□□ -0.92
HPS4-202ENST00000398145 AP5S1Q9NUS5 200 aa9.31□□□□□ -0.92
HPS4-202ENST00000398145 OR4C46A6NHA9 309 aa9.31□□□□□ -0.92
HPS4-202ENST00000398145 CCL8P80075 99 aa9.31□□□□□ -0.92
HPS4-202ENST00000398145 KRTCAP3Q53RY4 240 aa9.31□□□□□ -0.92
HPS4-202ENST00000398145 ZIC4Q8N9L1 334 aa9.31□□□□□ -0.92
HPS4-202ENST00000398145 PLXND1Q9Y4D7 1925 aa9.31□□□□□ -0.92
HPS4-202ENST00000398145 FAM157AC9JC47 383 aa9.31□□□□□ -0.92
HPS4-202ENST00000398145 CLDN18P56856 261 aa9.31□□□□□ -0.92
HPS4-202ENST00000398145 HGFACQ04756 655 aa9.31□□□□□ -0.92
HPS4-202ENST00000398145 LINC01551Q86U37 167 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms