RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 POLR3KQ9Y2Y1 108 aaPredicted RBP15.15■□□□□ 0.02
CHRFAM7A-202ENST00000397827 CTXND1A0A1B0GTU2 59 aa15.15■□□□□ 0.02
CHRFAM7A-202ENST00000397827 ITGB1BP1O14713 200 aa15.15■□□□□ 0.02
CHRFAM7A-202ENST00000397827 CR1LQ2VPA4 569 aa15.15■□□□□ 0.02
CHRFAM7A-202ENST00000397827 MAJINQ3KP22 176 aa15.15■□□□□ 0.02
CHRFAM7A-202ENST00000397827 WDR25Q64LD2 544 aaPredicted RBP15.15■□□□□ 0.02
CHRFAM7A-202ENST00000397827 OR4A16Q8NH70 328 aa15.15■□□□□ 0.02
CHRFAM7A-202ENST00000397827 IGLV3-9A0A075B6K5 115 aa15.14■□□□□ 0.01
CHRFAM7A-202ENST00000397827 CLDN34H7C241 214 aa15.14■□□□□ 0.01
CHRFAM7A-202ENST00000397827 F2RL2O00254 374 aa15.14■□□□□ 0.01
CHRFAM7A-202ENST00000397827 CYB5R3P00387 301 aaPredicted RBP15.14■□□□□ 0.01
CHRFAM7A-202ENST00000397827 TFPI2P48307 235 aa15.14■□□□□ 0.01
CHRFAM7A-202ENST00000397827 GNB2P62879 340 aa15.14■□□□□ 0.01
CHRFAM7A-202ENST00000397827 GCSAMLQ5JQS6 135 aa15.14■□□□□ 0.01
CHRFAM7A-202ENST00000397827 TGIF2LYQ8IUE0 185 aa15.14■□□□□ 0.01
CHRFAM7A-202ENST00000397827 RPUSD4Q96CM3 377 aaKnown RBP15.14■□□□□ 0.01
CHRFAM7A-202ENST00000397827 B4DEV8 164 aa15.14■□□□□ 0.01
CHRFAM7A-202ENST00000397827 PNRC1Q12796 327 aaPredicted RBP15.14■□□□□ 0.01
CHRFAM7A-202ENST00000397827 C17orf58Q2M2W7 97 aa15.14■□□□□ 0.01
CHRFAM7A-202ENST00000397827 VWC2Q2TAL6 325 aa15.14■□□□□ 0.01
CHRFAM7A-202ENST00000397827 GCM1Q9NP62 436 aa15.14■□□□□ 0.01
CHRFAM7A-202ENST00000397827 ZGRF1Q86YA3 2104 aa15.14■□□□□ 0.01
CHRFAM7A-202ENST00000397827 DSCAML1Q8TD84 2053 aa15.14■□□□□ 0.01
CHRFAM7A-202ENST00000397827 KIR2DL5BA0A0G2JN68 375 aa15.13■□□□□ 0.01
CHRFAM7A-202ENST00000397827 KIR2DL5BA0A0G2JPC4 375 aa15.13■□□□□ 0.01
CHRFAM7A-202ENST00000397827 KIR2DL5AQ8N109 375 aa15.13■□□□□ 0.01
CHRFAM7A-202ENST00000397827 C11orf42Q8N5U0 333 aa15.13■□□□□ 0.01
CHRFAM7A-202ENST00000397827 S1PR3Q99500 378 aa15.13■□□□□ 0.01
CHRFAM7A-202ENST00000397827 SMIM7Q9BQ49 75 aa15.13■□□□□ 0.01
CHRFAM7A-202ENST00000397827 GAB2Q9UQC2 676 aa15.13■□□□□ 0.01
CHRFAM7A-202ENST00000397827 YLPM1P49750 1951 aaKnown RBP15.13■□□□□ 0.01
CHRFAM7A-202ENST00000397827 A0A1W2PPQ1 181 aa15.13■□□□□ 0.01
CHRFAM7A-202ENST00000397827 TIMP3P35625 211 aa15.13■□□□□ 0.01
CHRFAM7A-202ENST00000397827 TCF15Q12870 199 aa15.13■□□□□ 0.01
CHRFAM7A-202ENST00000397827 TMEM18Q96B42 140 aa15.13■□□□□ 0.01
CHRFAM7A-202ENST00000397827 RRHO14718 337 aa15.13■□□□□ 0.01
CHRFAM7A-202ENST00000397827 CD1BP29016 333 aa15.13■□□□□ 0.01
CHRFAM7A-202ENST00000397827 CT45A1Q5HYN5 189 aa15.13■□□□□ 0.01
CHRFAM7A-202ENST00000397827 Q8N7P7 452 aa15.13■□□□□ 0.01
CHRFAM7A-202ENST00000397827 CT45A3Q8NHU0 189 aa15.13■□□□□ 0.01
CHRFAM7A-202ENST00000397827 WFIKKN1Q96NZ8 548 aa15.13■□□□□ 0.01
CHRFAM7A-202ENST00000397827 HEYLQ9NQ87 328 aaPredicted RBP15.13■□□□□ 0.01
CHRFAM7A-202ENST00000397827 FKBP11Q9NYL4 201 aa15.13■□□□□ 0.01
CHRFAM7A-202ENST00000397827 PTPRZ1P23471 2315 aaPredicted RBP15.13■□□□□ 0.01
CHRFAM7A-202ENST00000397827 IGHV1-46P01743 117 aa15.12■□□□□ 0.01
CHRFAM7A-202ENST00000397827 PSMB3P49720 205 aa15.12■□□□□ 0.01
CHRFAM7A-202ENST00000397827 RND2P52198 227 aa15.12■□□□□ 0.01
CHRFAM7A-202ENST00000397827 TNFAIP6P98066 277 aaPredicted RBP15.12■□□□□ 0.01
CHRFAM7A-202ENST00000397827 ADIRFQ15847 76 aa15.12■□□□□ 0.01
CHRFAM7A-202ENST00000397827 ABHD12Q8N2K0 398 aa15.12■□□□□ 0.01
CHRFAM7A-202ENST00000397827 TMEM140Q9NV12 185 aa15.12■□□□□ 0.01
CHRFAM7A-202ENST00000397827 IL6RP08887 468 aaPredicted RBP15.12■□□□□ 0.01
CHRFAM7A-202ENST00000397827 CGB3P0DN86 165 aa15.12■□□□□ 0.01
CHRFAM7A-202ENST00000397827 CGB7P0DN87 165 aa15.12■□□□□ 0.01
CHRFAM7A-202ENST00000397827 ERVK-16P61578 105 aa15.12■□□□□ 0.01
CHRFAM7A-202ENST00000397827 OR4F5Q8NH21 305 aa15.12■□□□□ 0.01
CHRFAM7A-202ENST00000397827 OR4F4Q96R69 305 aa15.12■□□□□ 0.01
CHRFAM7A-202ENST00000397827 RNF7Q9UBF6 113 aa15.12■□□□□ 0.01
CHRFAM7A-202ENST00000397827 CUL9Q8IWT3 2517 aa15.12■□□□□ 0.01
CHRFAM7A-202ENST00000397827 KALRNO60229 2985 aa15.11■□□□□ 0.01
CHRFAM7A-202ENST00000397827 TRBV24-1A0A075B6N3 115 aa15.11■□□□□ 0.01
CHRFAM7A-202ENST00000397827 A8MXE2 369 aa15.11■□□□□ 0.01
CHRFAM7A-202ENST00000397827 RELBQ01201 579 aa15.11■□□□□ 0.01
CHRFAM7A-202ENST00000397827 RTP5Q14D33 572 aa15.11■□□□□ 0.01
CHRFAM7A-202ENST00000397827 SNRNP40Q96DI7 357 aaKnown RBP15.11■□□□□ 0.01
CHRFAM7A-202ENST00000397827 CCL13Q99616 98 aa15.11■□□□□ 0.01
CHRFAM7A-202ENST00000397827 RAI1Q7Z5J4 1906 aaPredicted RBP15.11■□□□□ 0.01
CHRFAM7A-202ENST00000397827 SAA2-SAA4A0A096LPE2 208 aa15.11■□□□□ 0.01
CHRFAM7A-202ENST00000397827 TRAV38-1A0A0B4J264 116 aa15.11■□□□□ 0.01
CHRFAM7A-202ENST00000397827 PAGE4O60829 102 aa15.11■□□□□ 0.01
CHRFAM7A-202ENST00000397827 SAA2P0DJI9 122 aaPredicted RBP15.11■□□□□ 0.01
CHRFAM7A-202ENST00000397827 COA6Q5JTJ3 125 aaKnown RBP15.11■□□□□ 0.01
CHRFAM7A-202ENST00000397827 SFXN3Q9BWM7 321 aa15.11■□□□□ 0.01
CHRFAM7A-202ENST00000397827 APC2O95996 2303 aa15.1■□□□□ 0.01
CHRFAM7A-202ENST00000397827 C17orf112F2Z3M2 114 aa15.1■□□□□ 0.01
CHRFAM7A-202ENST00000397827 GYPAP02724 150 aa15.1■□□□□ 0.01
CHRFAM7A-202ENST00000397827 CEACAM8P31997 349 aaPredicted RBP15.1■□□□□ 0.01
CHRFAM7A-202ENST00000397827 CDKN1BP46527 198 aa15.1■□□□□ 0.01
CHRFAM7A-202ENST00000397827 CLEC2AQ6UVW9 174 aa15.1■□□□□ 0.01
CHRFAM7A-202ENST00000397827 FAM216BQ8N7L0 139 aa15.1■□□□□ 0.01
CHRFAM7A-202ENST00000397827 WDR83OSQ9Y284 106 aa15.1■□□□□ 0.01
CHRFAM7A-202ENST00000397827 KBTBD11-OT1A0A1B0GTJ5 212 aa15.1■□□□□ 0.01
CHRFAM7A-202ENST00000397827 ZNF705FA8MVS1 300 aaPredicted RBP15.1■□□□□ 0.01
CHRFAM7A-202ENST00000397827 ZNF705DP0CH99 300 aaPredicted RBP15.1■□□□□ 0.01
CHRFAM7A-202ENST00000397827 ZNF705BP0CI00 300 aaPredicted RBP15.1■□□□□ 0.01
CHRFAM7A-202ENST00000397827 CD40P25942 277 aa15.1■□□□□ 0.01
CHRFAM7A-202ENST00000397827 SELENOVP59797 346 aa15.1■□□□□ 0.01
CHRFAM7A-202ENST00000397827 TCF23Q7RTU1 214 aa15.1■□□□□ 0.01
CHRFAM7A-202ENST00000397827 LYG1Q8N1E2 194 aa15.1■□□□□ 0.01
CHRFAM7A-202ENST00000397827 DDB2Q92466 427 aa15.1■□□□□ 0.01
CHRFAM7A-202ENST00000397827 PARLQ9H300 379 aa15.1■□□□□ 0.01
CHRFAM7A-202ENST00000397827 NAT8Q9UHE5 227 aa15.1■□□□□ 0.01
CHRFAM7A-202ENST00000397827 ZFP30Q9Y2G7 519 aa15.1■□□□□ 0.01
CHRFAM7A-202ENST00000397827 TANC2Q9HCD6 1990 aa15.1■□□□□ 0.01
CHRFAM7A-202ENST00000397827 RBFOX2O43251 390 aaKnown RBP eCLIP15.09■□□□□ 0.01
CHRFAM7A-202ENST00000397827 GATA4P43694 442 aa15.09■□□□□ 0.01
CHRFAM7A-202ENST00000397827 VDAC2P45880 294 aaPredicted RBP15.09■□□□□ 0.01
CHRFAM7A-202ENST00000397827 CDC34P49427 236 aaPredicted RBP15.09■□□□□ 0.01
CHRFAM7A-202ENST00000397827 RNF151Q2KHN1 245 aa15.09■□□□□ 0.01
CHRFAM7A-202ENST00000397827 TMEM170AQ8WVE7 144 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms