RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ZNF146Q15072 292 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 FNDC4Q9H6D8 234 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-205ENST00000397611 VSIRQ9H7M9 311 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 SAP30LQ9HAJ7 183 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 ZNF355PQ9NSJ1 428 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 HSPB7Q9UBY9 170 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 RFNGQ9Y644 331 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 CCL3P10147 92 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 ERVK11-1P61568 191 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 GGNQ86UU5 652 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 IGKV1-27A0A075B6S5 117 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 C21orf140B9A014 251 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 ARL14EPLP0DKL9 152 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 ATP5G3P48201 142 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 PPP1R32Q7Z5V6 425 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 PDPNQ86YL7 162 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 TMEM116Q8NCL8 245 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 EDARADDQ8WWZ3 215 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 OR2V2Q96R30 315 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 GNB4Q9HAV0 340 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 NGBQ9NPG2 151 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 LY96Q9Y6Y9 160 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 NKX6-3A6NJ46 265 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 C1QTNF9BB2RNN3 333 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 PROB1E7EW31 1015 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 TNFSF13O75888 250 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 MYF5P13349 255 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 FAM90A2PQ658T7 463 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 ZNF841Q6ZN19 808 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 OR1B1Q8NGR6 318 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 GATAD1Q8WUU5 269 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 TMEM70Q9BUB7 260 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 PI4KAP42356 2102 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 S1PR2O95136 353 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 C1QTNF9P0C862 333 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 LYRM7Q5U5X0 104 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 TMEM136Q6ZRR5 245 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 CALHM1Q8IU99 346 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 MKRN2OSH3BPM6 223 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 RBP4P02753 201 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 SOX8P57073 446 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 TMPRSS3P57727 454 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 SCGB1D4Q6XE38 83 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 LINC00696Q6ZRV3 163 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 GUCD1Q96NT3 240 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 PPIAL4AQ9Y536 164 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 CEP295Q9C0D2 2601 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 MYO7BQ6PIF6 2116 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 GOLGB1Q14789 3259 aaKnown RBP4.6□□□□□ -1.67
PTPRD-205ENST00000397611 FER1L5A0AVI2 2057 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 SVILO95425 2214 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 A0A1W2PRS3 328 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 PFN1P07737 140 aaKnown RBP4.6□□□□□ -1.67
PTPRD-205ENST00000397611 P0C879 139 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 OR10D3Q8NH80 312 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 C2orf16Q68DN1 1984 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 TMSB15BA0A087X1C1 80 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 CNIH1O95406 144 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 UMODP07911 640 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 AMMECR1LQ6DCA0 310 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 ZNF525Q8N782 197 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 OR51G1Q8NGK1 321 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 OCIAD1Q9NX40 245 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 ABCA1O95477 2261 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 LY6G6EA0A0G2JKS1 128 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 ZG16O60844 167 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 HLA-DRB1P01911 266 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 COL8A1P27658 744 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 DAZAP2Q15038 168 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-205ENST00000397611 TEPPQ6URK8 271 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 UNQ6494/PRO21346Q6UXR6 183 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 POLR3KQ9Y2Y1 108 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-205ENST00000397611 U3KQA8 63 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 ESPL1Q14674 2120 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 HBZP02008 142 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 CD33P20138 364 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 CRYBB3P26998 211 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 TFF3Q07654 80 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 SSPNQ14714 243 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 TPTE2P1Q5T6R2 138 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 FAM90A1Q86YD7 464 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 DOLPP1Q86YN1 238 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 PGLYRP4Q96LB8 373 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 UCN2Q96RP3 112 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 WDR87Q6ZQQ6 2873 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 STAG3L2P0CL84 134 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 GPR6P46095 362 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-205ENST00000397611 FOXA3P55318 350 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-205ENST00000397611 SMAGPQ0VAQ4 97 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 IGFBP7Q16270 282 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 C10orf113Q5VZT2 155 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 RNF144BQ7Z419 303 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 TMEM256Q8N2U0 113 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 OR10X1Q8NGY0 326 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 LOXL4Q96JB6 756 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 IL36BQ9NZH7 164 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 WDR83OSQ9Y284 106 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 R4GN57 208 aa4.6□□□□□ -1.67
PTPRD-205ENST00000397611 POLEQ07864 2286 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms