RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 B2MP61769 119 aa6.89□□□□□ -1.31
NEDD9-203ENST00000397378 ARFRP1Q13795 201 aa6.89□□□□□ -1.31
NEDD9-203ENST00000397378 SSX1Q16384 188 aa6.89□□□□□ -1.31
NEDD9-203ENST00000397378 LGALS9BQ3B8N2 356 aa6.89□□□□□ -1.31
NEDD9-203ENST00000397378 PLAC9Q5JTB6 97 aa6.89□□□□□ -1.31
NEDD9-203ENST00000397378 LAMTOR1Q6IAA8 161 aa6.89□□□□□ -1.31
NEDD9-203ENST00000397378 POM121L12Q8N7R1 296 aa6.89□□□□□ -1.31
NEDD9-203ENST00000397378 OR56B1Q8NGI3 324 aa6.89□□□□□ -1.31
NEDD9-203ENST00000397378 VSTM2AQ8TAG5 236 aa6.89□□□□□ -1.31
NEDD9-203ENST00000397378 TMEM167AQ8TBQ9 72 aa6.89□□□□□ -1.31
NEDD9-203ENST00000397378 DCUN1D5Q9BTE7 237 aa6.89□□□□□ -1.31
NEDD9-203ENST00000397378 CENPOQ9BU64 300 aa6.89□□□□□ -1.31
NEDD9-203ENST00000397378 ZNF436Q9C0F3 470 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-203ENST00000397378 C6orf62Q9GZU0 229 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-203ENST00000397378 CSTL1Q9H114 145 aa6.89□□□□□ -1.31
NEDD9-203ENST00000397378 IGHV4-4A0A075B6R2 117 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 OR4C46A6NHA9 309 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 MPTX1A8MV57 137 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 C11orf94C9JXX5 98 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 SLC17A2O00624 439 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 MYL12BO14950 172 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 FCGR3BO75015 233 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 TSC22D2O75157 780 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 KBTBD11O94819 623 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 UCHL1P09936 223 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 AREGP15514 252 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 ADMP35318 185 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 MRPS15P82914 257 aaKnown RBP6.88□□□□□ -1.31
NEDD9-203ENST00000397378 RELQ04864 619 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-203ENST00000397378 IRF3Q14653 427 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 P2RY14Q15391 338 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 HSD17B12Q53GQ0 312 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 PLET1Q6UQ28 207 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 H1FOOQ8IZA3 346 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-203ENST00000397378 PUSL1Q8N0Z8 303 aaKnown RBP6.88□□□□□ -1.31
NEDD9-203ENST00000397378 NANOGP1Q8N7R0 232 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 OR11H2Q8NH07 326 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 ZNF502Q8TBZ5 544 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 TMEM190Q8WZ59 177 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 OR2A7Q96R45 310 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 GINS4Q9BRT9 223 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 DAZ1Q9NQZ3 744 aaKnown RBP6.88□□□□□ -1.31
NEDD9-203ENST00000397378 SMPD3Q9NY59 655 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-203ENST00000397378 MRPS7Q9Y2R9 242 aaKnown RBP6.88□□□□□ -1.31
NEDD9-203ENST00000397378 KCNK7Q9Y2U2 307 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 PRELID3BQ9Y3B1 194 aa6.88□□□□□ -1.31
NEDD9-203ENST00000397378 IGLV2-18A0A075B6J9 118 aa6.87□□□□□ -1.31
NEDD9-203ENST00000397378 PRSS47A8MTI9 375 aa6.87□□□□□ -1.31
NEDD9-203ENST00000397378 P0DMU3 169 aa6.87□□□□□ -1.31
NEDD9-203ENST00000397378 FAM231AP0DMU4 169 aa6.87□□□□□ -1.31
NEDD9-203ENST00000397378 FAM231CP0DMU5 169 aa6.87□□□□□ -1.31
NEDD9-203ENST00000397378 DEFA4P12838 97 aa6.87□□□□□ -1.31
NEDD9-203ENST00000397378 GPR183P32249 361 aa6.87□□□□□ -1.31
NEDD9-203ENST00000397378 Q6ZS49 121 aa6.87□□□□□ -1.31
NEDD9-203ENST00000397378 KCTD9Q7L273 389 aa6.87□□□□□ -1.31
NEDD9-203ENST00000397378 VKORC1L1Q8N0U8 176 aa6.87□□□□□ -1.31
NEDD9-203ENST00000397378 OR5B3Q8NH48 314 aa6.87□□□□□ -1.31
NEDD9-203ENST00000397378 CD300LFQ8TDQ1 290 aa6.87□□□□□ -1.31
NEDD9-203ENST00000397378 C18orf15Q96N68 181 aa6.87□□□□□ -1.31
NEDD9-203ENST00000397378 TSC22D3Q99576 134 aa6.87□□□□□ -1.31
NEDD9-203ENST00000397378 HRH4Q9H3N8 390 aa6.87□□□□□ -1.31
NEDD9-203ENST00000397378 PLGRKTQ9HBL7 147 aa6.87□□□□□ -1.31
NEDD9-203ENST00000397378 AGRNO00468 2067 aa6.87□□□□□ -1.31
NEDD9-203ENST00000397378 IGHV3-35A0A0C4DH35 117 aa6.86□□□□□ -1.31
NEDD9-203ENST00000397378 DEFB4AO15263 64 aa6.86□□□□□ -1.31
NEDD9-203ENST00000397378 TGOLN2O43493 480 aa6.86□□□□□ -1.31
NEDD9-203ENST00000397378 SLC22A5O76082 557 aa6.86□□□□□ -1.31
NEDD9-203ENST00000397378 CD36P16671 472 aa6.86□□□□□ -1.31
NEDD9-203ENST00000397378 PTBP1P26599 531 aaKnown RBP eCLIP6.86□□□□□ -1.314e-9■■■□□ 15.2
NEDD9-203ENST00000397378 CMC4P56277 68 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-203ENST00000397378 RPL30P62888 115 aaKnown RBP6.86□□□□□ -1.31
NEDD9-203ENST00000397378 PVRIGQ6DKI7 326 aa6.86□□□□□ -1.31
NEDD9-203ENST00000397378 NR2C2APQ86WQ0 139 aa6.86□□□□□ -1.31
NEDD9-203ENST00000397378 APRG1Q8IVJ8 170 aa6.86□□□□□ -1.31
NEDD9-203ENST00000397378 PQLC1Q8N2U9 271 aa6.86□□□□□ -1.31
NEDD9-203ENST00000397378 OR4S2Q8NH73 311 aa6.86□□□□□ -1.31
NEDD9-203ENST00000397378 RAB3CQ96E17 227 aa6.86□□□□□ -1.31
NEDD9-203ENST00000397378 GFI1Q99684 422 aa6.86□□□□□ -1.31
NEDD9-203ENST00000397378 THYN1Q9P016 225 aa6.86□□□□□ -1.31
NEDD9-203ENST00000397378 PSORS1C1Q9UIG5 152 aa6.86□□□□□ -1.31
NEDD9-203ENST00000397378 RBMX2Q9Y388 322 aaKnown RBP6.86□□□□□ -1.31
NEDD9-203ENST00000397378 CGB1A6NKQ9 187 aa6.85□□□□□ -1.31
NEDD9-203ENST00000397378 K7EMT4 169 aa6.85□□□□□ -1.31
NEDD9-203ENST00000397378 MFNGO00587 321 aa6.85□□□□□ -1.31
NEDD9-203ENST00000397378 DENRO43583 198 aaKnown RBP6.85□□□□□ -1.31
NEDD9-203ENST00000397378 REG1AP05451 166 aa6.85□□□□□ -1.31
NEDD9-203ENST00000397378 CTSDP07339 412 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-203ENST00000397378 RPL8P62917 257 aaKnown RBP6.85□□□□□ -1.31
NEDD9-203ENST00000397378 RAB11BQ15907 218 aa6.85□□□□□ -1.31
NEDD9-203ENST00000397378 NDUFA5Q16718 116 aa6.85□□□□□ -1.31
NEDD9-203ENST00000397378 C2orf76Q3KRA6 126 aa6.85□□□□□ -1.31
NEDD9-203ENST00000397378 OR2B11Q5JQS5 317 aa6.85□□□□□ -1.31
NEDD9-203ENST00000397378 C1orf134Q5TEV5 83 aa6.85□□□□□ -1.31
NEDD9-203ENST00000397378 CFAP161Q6P656 301 aa6.85□□□□□ -1.31
NEDD9-203ENST00000397378 SPSB3Q6PJ21 355 aa6.85□□□□□ -1.31
NEDD9-203ENST00000397378 OR4A5Q8NH83 315 aa6.85□□□□□ -1.31
NEDD9-203ENST00000397378 VN1R17PQ8TDU5 208 aa6.85□□□□□ -1.31
NEDD9-203ENST00000397378 MAFIPQ8WZ33 124 aa6.85□□□□□ -1.31
NEDD9-203ENST00000397378 FAM3DQ96BQ1 224 aa6.85□□□□□ -1.31
NEDD9-203ENST00000397378 ATP6V0BQ99437 205 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms