RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 TMEM167AQ8TBQ9 72 aa10.53□□□□□ -0.72
SMU1-201ENST00000397149 LSM4Q9Y4Z0 139 aaKnown RBP10.53□□□□□ -0.72
SMU1-201ENST00000397149 FXYD7P58549 80 aa10.53□□□□□ -0.72
SMU1-201ENST00000397149 ATXN8Q156A1 80 aa10.53□□□□□ -0.72
SMU1-201ENST00000397149 DMKNQ6E0U4 476 aaPredicted RBP10.53□□□□□ -0.72
SMU1-201ENST00000397149 FAM214BQ7L5A3 538 aa10.53□□□□□ -0.72
SMU1-201ENST00000397149 HOGA1Q86XE5 327 aa10.53□□□□□ -0.72
SMU1-201ENST00000397149 ZNF114Q8NC26 417 aa10.53□□□□□ -0.72
SMU1-201ENST00000397149 TMEM186Q96B77 213 aa10.53□□□□□ -0.72
SMU1-201ENST00000397149 ERVK11-1P61568 191 aa10.53□□□□□ -0.72
SMU1-201ENST00000397149 LHFPL4Q7Z7J7 247 aa10.53□□□□□ -0.72
SMU1-201ENST00000397149 ATG4DQ86TL0 474 aaPredicted RBP10.53□□□□□ -0.72
SMU1-201ENST00000397149 GCM2O75603 506 aaPredicted RBP10.52□□□□□ -0.72
SMU1-201ENST00000397149 C5orf47Q569G3 176 aa10.52□□□□□ -0.72
SMU1-201ENST00000397149 RPL39P5Q59GN2 51 aa10.52□□□□□ -0.72
SMU1-201ENST00000397149 ATP1A1-AS1Q5TC04 95 aa10.52□□□□□ -0.72
SMU1-201ENST00000397149 FER1L6-AS1Q8NA97 138 aa10.52□□□□□ -0.72
SMU1-201ENST00000397149 COQ2Q96H96 371 aa10.52□□□□□ -0.72
SMU1-201ENST00000397149 CGAP01215 116 aa10.52□□□□□ -0.73
SMU1-201ENST00000397149 TGIF1Q15583 401 aa10.52□□□□□ -0.73
SMU1-201ENST00000397149 CYP2G1PQ6ZSU1 146 aa10.52□□□□□ -0.73
SMU1-201ENST00000397149 LGALS1P09382 135 aaKnown RBP10.52□□□□□ -0.73
SMU1-201ENST00000397149 CCL1P22362 96 aa10.52□□□□□ -0.73
SMU1-201ENST00000397149 FGF12P61328 243 aa10.52□□□□□ -0.73
SMU1-201ENST00000397149 CD24P25063 80 aa10.52□□□□□ -0.73
SMU1-201ENST00000397149 ZNF79Q15937 498 aa10.52□□□□□ -0.73
SMU1-201ENST00000397149 CD300EQ496F6 205 aaPredicted RBP10.52□□□□□ -0.73
SMU1-201ENST00000397149 OR9G1Q8NH87 305 aa10.52□□□□□ -0.73
SMU1-201ENST00000397149 TMEM126AQ9H061 195 aa10.52□□□□□ -0.73
SMU1-201ENST00000397149 ELOVL5Q9NYP7 299 aa10.52□□□□□ -0.73
SMU1-201ENST00000397149 KLK8O60259 260 aa10.52□□□□□ -0.73
SMU1-201ENST00000397149 PLNP26678 52 aa10.52□□□□□ -0.73
SMU1-201ENST00000397149 RBMY1FQ15415 496 aaKnown RBP10.52□□□□□ -0.73
SMU1-201ENST00000397149 WDFY2Q96P53 400 aa10.52□□□□□ -0.73
SMU1-201ENST00000397149 RPRMQ9NS64 109 aa10.52□□□□□ -0.73
SMU1-201ENST00000397149 HEATR5BQ9P2D3 2071 aa10.52□□□□□ -0.73
SMU1-201ENST00000397149 VENTXO95231 258 aa10.51□□□□□ -0.73
SMU1-201ENST00000397149 TNFRSF9Q07011 255 aa10.51□□□□□ -0.73
SMU1-201ENST00000397149 ZNRF1Q8ND25 227 aa10.51□□□□□ -0.73
SMU1-201ENST00000397149 GCHFRP30047 84 aa10.51□□□□□ -0.73
SMU1-201ENST00000397149 Q6ZNB5 142 aa10.51□□□□□ -0.73
SMU1-201ENST00000397149 FAM168AQ92567 244 aa10.51□□□□□ -0.73
SMU1-201ENST00000397149 COLCA1Q6ZS62 124 aa10.51□□□□□ -0.73
SMU1-201ENST00000397149 SELENOHQ8IZQ5 122 aaKnown RBP10.51□□□□□ -0.73
SMU1-201ENST00000397149 RFLNBQ8N5W9 214 aa10.51□□□□□ -0.73
SMU1-201ENST00000397149 SPSB2Q99619 263 aa10.51□□□□□ -0.73
SMU1-201ENST00000397149 RTTNQ86VV8 2226 aa10.51□□□□□ -0.73
SMU1-201ENST00000397149 ITGB1BP1O14713 200 aa10.51□□□□□ -0.73
SMU1-201ENST00000397149 NBEAP1P0C6P0 100 aa10.51□□□□□ -0.73
SMU1-201ENST00000397149 OR13A1Q8NGR1 328 aa10.51□□□□□ -0.73
SMU1-201ENST00000397149 NUP214P35658 2090 aaPredicted RBP10.51□□□□□ -0.73
SMU1-201ENST00000397149 ZAR1Q86SH2 424 aa10.51□□□□□ -0.73
SMU1-201ENST00000397149 SCARF2Q96GP6 870 aaPredicted RBP10.51□□□□□ -0.73
SMU1-201ENST00000397149 NAA38Q9BRA0 125 aaKnown RBP10.51□□□□□ -0.73
SMU1-201ENST00000397149 TCF19Q9Y242 345 aa10.51□□□□□ -0.73
SMU1-201ENST00000397149 A0A0G2JLM5 398 aa10.51□□□□□ -0.73
SMU1-201ENST00000397149 A0A0J9YW62 118 aa10.51□□□□□ -0.73
SMU1-201ENST00000397149 NWD2Q9ULI1 1742 aa10.51□□□□□ -0.73
SMU1-201ENST00000397149 PUSL1Q8N0Z8 303 aaKnown RBP10.5□□□□□ -0.73
SMU1-201ENST00000397149 SCN1AP35498 2009 aa10.5□□□□□ -0.73
SMU1-201ENST00000397149 CEACAM8P31997 349 aaPredicted RBP10.5□□□□□ -0.73
SMU1-201ENST00000397149 TRBV5-4A0A0C4DH59 114 aa10.5□□□□□ -0.73
SMU1-201ENST00000397149 CTDSPLO15194 276 aa10.5□□□□□ -0.73
SMU1-201ENST00000397149 RND3P61587 244 aa10.5□□□□□ -0.73
SMU1-201ENST00000397149 ZNF638Q14966 1978 aaKnown RBP10.5□□□□□ -0.73
SMU1-201ENST00000397149 SAP30O75446 220 aa10.5□□□□□ -0.73
SMU1-201ENST00000397149 FAM201AQ5SY85 155 aa10.5□□□□□ -0.73
SMU1-201ENST00000397149 CABIN1Q9Y6J0 2220 aa10.5□□□□□ -0.73
SMU1-201ENST00000397149 KLHDC2Q9Y2U9 406 aa10.5□□□□□ -0.73
SMU1-201ENST00000397149 A0A1B0GUT8 65 aa10.5□□□□□ -0.73
SMU1-201ENST00000397149 SIGMAR1Q99720 223 aa10.5□□□□□ -0.73
SMU1-201ENST00000397149 CHTOPQ9Y3Y2 248 aaKnown RBP10.5□□□□□ -0.73
SMU1-201ENST00000397149 AHCTF1Q8WYP5 2266 aa10.49□□□□□ -0.73
SMU1-201ENST00000397149 A8MWV9 139 aa10.49□□□□□ -0.73
SMU1-201ENST00000397149 DRD3P35462 400 aa10.49□□□□□ -0.73
SMU1-201ENST00000397149 CRYBA2P53672 197 aa10.49□□□□□ -0.73
SMU1-201ENST00000397149 VN1R4Q7Z5H5 301 aa10.49□□□□□ -0.73
SMU1-201ENST00000397149 DLL3Q9NYJ7 618 aa10.49□□□□□ -0.73
SMU1-201ENST00000397149 TBR1Q16650 682 aa10.49□□□□□ -0.73
SMU1-201ENST00000397149 ZPLD1Q8TCW7 415 aa10.49□□□□□ -0.73
SMU1-201ENST00000397149 TMEM222Q9H0R3 208 aa10.49□□□□□ -0.73
SMU1-201ENST00000397149 UNC13CQ8NB66 2214 aa10.49□□□□□ -0.73
SMU1-201ENST00000397149 SCO2A0A1W2PP80 73 aa10.49□□□□□ -0.73
SMU1-201ENST00000397149 H3BMM0 161 aa10.49□□□□□ -0.73
SMU1-201ENST00000397149 GATA2P23769 480 aaPredicted RBP10.49□□□□□ -0.73
SMU1-201ENST00000397149 PRR31Q5SQ13 230 aa10.49□□□□□ -0.73
SMU1-201ENST00000397149 UBE2WQ96B02 151 aa10.49□□□□□ -0.73
SMU1-201ENST00000397149 LINC00527Q9UJ94 153 aa10.49□□□□□ -0.73
SMU1-201ENST00000397149 CXCL2P19875 107 aa10.49□□□□□ -0.73
SMU1-201ENST00000397149 EGR4Q05215 589 aa10.49□□□□□ -0.73
SMU1-201ENST00000397149 G6PC2Q9NQR9 355 aa10.49□□□□□ -0.73
SMU1-201ENST00000397149 PRR33A8MZF0 331 aa10.49□□□□□ -0.73
SMU1-201ENST00000397149 NDUFA2O43678 99 aa10.48□□□□□ -0.73
SMU1-201ENST00000397149 HOXD4P09016 255 aaPredicted RBP10.48□□□□□ -0.73
SMU1-201ENST00000397149 GAGE2BQ13066 116 aa10.48□□□□□ -0.73
SMU1-201ENST00000397149 GAGE2AQ6NT46 116 aa10.48□□□□□ -0.73
SMU1-201ENST00000397149 NCOR1O75376 2440 aa10.48□□□□□ -0.73
SMU1-201ENST00000397149 CDKN1AP38936 164 aa10.48□□□□□ -0.73
SMU1-201ENST00000397149 GNG5P63218 68 aa10.48□□□□□ -0.73
SMU1-201ENST00000397149 C1QL2Q7Z5L3 287 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms