RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 RRNAD1Q96FB5 475 aaKnown RBP10.76□□□□□ -0.69
SEC13-205ENST00000397101 AIFM2Q9BRQ8 373 aa10.76□□□□□ -0.69
SEC13-205ENST00000397101 MED28Q9H204 178 aa10.76□□□□□ -0.69
SEC13-205ENST00000397101 PLEKHA2Q9HB19 425 aa10.76□□□□□ -0.69
SEC13-205ENST00000397101 FAM212BQ9NTI7 297 aaPredicted RBP10.76□□□□□ -0.69
SEC13-205ENST00000397101 KIAA1456Q9P272 454 aa10.76□□□□□ -0.69
SEC13-205ENST00000397101 NCBP2LA6PVI3 153 aaKnown RBP10.75□□□□□ -0.69
SEC13-205ENST00000397101 FAM25EA8MYX2 175 aa10.75□□□□□ -0.69
SEC13-205ENST00000397101 CDS2O95674 445 aa10.75□□□□□ -0.69
SEC13-205ENST00000397101 IGKV1-16P04430 117 aa10.75□□□□□ -0.69
SEC13-205ENST00000397101 NQO2P16083 231 aa10.75□□□□□ -0.69
SEC13-205ENST00000397101 G6PCP35575 357 aa10.75□□□□□ -0.69
SEC13-205ENST00000397101 BRWD1-AS2P59051 145 aa10.75□□□□□ -0.69
SEC13-205ENST00000397101 VMA21Q3ZAQ7 101 aa10.75□□□□□ -0.69
SEC13-205ENST00000397101 TMEM177Q53S58 311 aa10.75□□□□□ -0.69
SEC13-205ENST00000397101 H2BFWTQ7Z2G1 175 aa10.75□□□□□ -0.69
SEC13-205ENST00000397101 THNSL2Q86YJ6 484 aa10.75□□□□□ -0.69
SEC13-205ENST00000397101 MITD1Q8WV92 249 aa10.75□□□□□ -0.69
SEC13-205ENST00000397101 EAF1Q96JC9 268 aaPredicted RBP10.75□□□□□ -0.69
SEC13-205ENST00000397101 TSNAXQ99598 290 aaKnown RBP10.75□□□□□ -0.69
SEC13-205ENST00000397101 COMMD9Q9P000 198 aa10.75□□□□□ -0.69
SEC13-205ENST00000397101 A0A0B4J293 547 aa10.74□□□□□ -0.69
SEC13-205ENST00000397101 A0A0B4J2A0 478 aa10.74□□□□□ -0.69
SEC13-205ENST00000397101 C13orf42A0A1B0GVH6 325 aa10.74□□□□□ -0.69
SEC13-205ENST00000397101 C7orf66A4D0T2 115 aa10.74□□□□□ -0.69
SEC13-205ENST00000397101 C5orf51A6NDU8 294 aa10.74□□□□□ -0.69
SEC13-205ENST00000397101 RBMXL2O75526 392 aaKnown RBP10.74□□□□□ -0.69
SEC13-205ENST00000397101 LGALS7P47929 136 aa10.74□□□□□ -0.69
SEC13-205ENST00000397101 MMDQ15546 238 aa10.74□□□□□ -0.69
SEC13-205ENST00000397101 ETV3LQ6ZN32 361 aa10.74□□□□□ -0.69
SEC13-205ENST00000397101 LYZL2Q7Z4W2 148 aa10.74□□□□□ -0.69
SEC13-205ENST00000397101 VKORC1L1Q8N0U8 176 aa10.74□□□□□ -0.69
SEC13-205ENST00000397101 SLC35G3Q8N808 338 aa10.74□□□□□ -0.69
SEC13-205ENST00000397101 LHFPL5Q8TAF8 219 aa10.74□□□□□ -0.69
SEC13-205ENST00000397101 IL22RA2Q969J5 263 aa10.74□□□□□ -0.69
SEC13-205ENST00000397101 TMEM56Q96MV1 263 aa10.74□□□□□ -0.69
SEC13-205ENST00000397101 RNF5Q99942 180 aa10.74□□□□□ -0.69
SEC13-205ENST00000397101 SHPKQ9UHJ6 478 aa10.74□□□□□ -0.69
SEC13-205ENST00000397101 LSM4Q9Y4Z0 139 aaKnown RBP10.74□□□□□ -0.69
SEC13-205ENST00000397101 TMEM56-RWDD3S4R434 201 aa10.74□□□□□ -0.69
SEC13-205ENST00000397101 FAM90A9PA6NNJ1 464 aa10.73□□□□□ -0.69
SEC13-205ENST00000397101 GOSR2O14653 212 aa10.73□□□□□ -0.69
SEC13-205ENST00000397101 ADAP1O75689 374 aa10.73□□□□□ -0.69
SEC13-205ENST00000397101 IGKV1-39P01597 117 aa10.73□□□□□ -0.69
SEC13-205ENST00000397101 IGKV1D-39P04432 117 aa10.73□□□□□ -0.69
SEC13-205ENST00000397101 CASC10Q5T4H9 136 aa10.73□□□□□ -0.69
SEC13-205ENST00000397101 THOC7Q6I9Y2 204 aaKnown RBP10.73□□□□□ -0.69
SEC13-205ENST00000397101 VSTM2AQ8TAG5 236 aa10.73□□□□□ -0.69
SEC13-205ENST00000397101 RITA1Q96K30 269 aa10.73□□□□□ -0.69
SEC13-205ENST00000397101 RHOVQ96L33 236 aa10.73□□□□□ -0.69
SEC13-205ENST00000397101 CLCC1Q96S66 551 aa10.73□□□□□ -0.69
SEC13-205ENST00000397101 PDCD10Q9BUL8 212 aa10.73□□□□□ -0.69
SEC13-205ENST00000397101 MGAT4CQ9UBM8 478 aa10.73□□□□□ -0.69
SEC13-205ENST00000397101 STAB2Q8WWQ8 2551 aa10.73□□□□□ -0.69
SEC13-205ENST00000397101 TENM2Q9NT68 2774 aa10.73□□□□□ -0.69
SEC13-205ENST00000397101 DUXBA0A1W2PPF3 345 aa10.72□□□□□ -0.69
SEC13-205ENST00000397101 MARCH11A6NNE9 402 aa10.72□□□□□ -0.69
SEC13-205ENST00000397101 CCSO14618 274 aa10.72□□□□□ -0.69
SEC13-205ENST00000397101 NBR2O15453 112 aa10.72□□□□□ -0.69
SEC13-205ENST00000397101 SLC25A17O43808 307 aa10.72□□□□□ -0.69
SEC13-205ENST00000397101 SNAPC5O75971 98 aa10.72□□□□□ -0.69
SEC13-205ENST00000397101 VDAC1P21796 283 aa10.72□□□□□ -0.69
SEC13-205ENST00000397101 CNTFRP26992 372 aa10.72□□□□□ -0.69
SEC13-205ENST00000397101 MYCNOSP40205 109 aa10.72□□□□□ -0.69
SEC13-205ENST00000397101 PSG5Q15238 335 aa10.72□□□□□ -0.69
SEC13-205ENST00000397101 GGNBP1Q5YKI7 109 aa10.72□□□□□ -0.69
SEC13-205ENST00000397101 GSG1LQ6UXU4 331 aa10.72□□□□□ -0.69
SEC13-205ENST00000397101 LRTM2Q8N967 370 aa10.72□□□□□ -0.69
SEC13-205ENST00000397101 OR4A16Q8NH70 328 aa10.72□□□□□ -0.69
SEC13-205ENST00000397101 GPR146Q96CH1 333 aa10.72□□□□□ -0.69
SEC13-205ENST00000397101 RASL11BQ9BPW5 248 aa10.72□□□□□ -0.69
SEC13-205ENST00000397101 SLC25A33Q9BSK2 321 aa10.72□□□□□ -0.69
SEC13-205ENST00000397101 ZFP57Q9NU63 452 aa10.72□□□□□ -0.69
SEC13-205ENST00000397101 TMEM140Q9NV12 185 aa10.72□□□□□ -0.69
SEC13-205ENST00000397101 METTL1Q9UBP6 276 aaKnown RBP10.72□□□□□ -0.69
SEC13-205ENST00000397101 TMED3Q9Y3Q3 217 aa10.72□□□□□ -0.69
SEC13-205ENST00000397101 HYDINQ4G0P3 5121 aa10.71□□□□□ -0.69
SEC13-205ENST00000397101 SRRM4A7MD48 611 aaKnown RBP10.71□□□□□ -0.69
SEC13-205ENST00000397101 M0QZK8 103 aa10.71□□□□□ -0.69
SEC13-205ENST00000397101 OR2F2O95006 317 aa10.71□□□□□ -0.69
SEC13-205ENST00000397101 OR2A4O95047 310 aa10.71□□□□□ -0.69
SEC13-205ENST00000397101 SAA1P0DJI8 122 aaPredicted RBP10.71□□□□□ -0.69
SEC13-205ENST00000397101 F2RL1P55085 397 aa10.71□□□□□ -0.69
SEC13-205ENST00000397101 UBE2KP61086 200 aa10.71□□□□□ -0.69
SEC13-205ENST00000397101 RRAS2P62070 204 aaPredicted RBP10.71□□□□□ -0.69
SEC13-205ENST00000397101 EBI3Q14213 229 aa10.71□□□□□ -0.69
SEC13-205ENST00000397101 KHDC1LQ5JSQ8 128 aa10.71□□□□□ -0.69
SEC13-205ENST00000397101 FAM219AQ8IW50 185 aa10.71□□□□□ -0.69
SEC13-205ENST00000397101 OR1S1Q8NH92 325 aa10.71□□□□□ -0.69
SEC13-205ENST00000397101 MUC7Q8TAX7 377 aa10.71□□□□□ -0.69
SEC13-205ENST00000397101 LSM10Q969L4 123 aaKnown RBP10.71□□□□□ -0.69
SEC13-205ENST00000397101 SEC22AQ96IW7 307 aa10.71□□□□□ -0.69
SEC13-205ENST00000397101 RBM14Q96PK6 669 aaKnown RBP10.71□□□□□ -0.69
SEC13-205ENST00000397101 OR2A7Q96R45 310 aa10.71□□□□□ -0.69
SEC13-205ENST00000397101 P2RX4Q99571 388 aa10.71□□□□□ -0.69
SEC13-205ENST00000397101 SPIN2AQ99865 258 aa10.71□□□□□ -0.69
SEC13-205ENST00000397101 SPIN2BQ9BPZ2 258 aa10.71□□□□□ -0.69
SEC13-205ENST00000397101 FBXL15Q9H469 300 aa10.71□□□□□ -0.69
SEC13-205ENST00000397101 GSKIPQ9P0R6 139 aa10.71□□□□□ -0.69
SEC13-205ENST00000397101 CSMD3Q7Z407 3707 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms