RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 GCHFRP30047 84 aa11.01□□□□□ -0.65
TRIM40-207ENST00000396581 CASP6P55212 293 aa11.01□□□□□ -0.65
TRIM40-207ENST00000396581 TGFBR3Q03167 851 aa11.01□□□□□ -0.65
TRIM40-207ENST00000396581 IGFL3Q6UXB1 125 aa11.01□□□□□ -0.65
TRIM40-207ENST00000396581 WDR82Q6UXN9 313 aa11.01□□□□□ -0.65
TRIM40-207ENST00000396581 ZNF826PQ6ZT77 177 aa11.01□□□□□ -0.65
TRIM40-207ENST00000396581 FAM90A1Q86YD7 464 aa11.01□□□□□ -0.65
TRIM40-207ENST00000396581 KLF14Q8TD94 323 aaPredicted RBP11.01□□□□□ -0.65
TRIM40-207ENST00000396581 MRPL18Q9H0U6 180 aaKnown RBP11.01□□□□□ -0.65
TRIM40-207ENST00000396581 CXXC4Q9H2H0 198 aa11.01□□□□□ -0.65
TRIM40-207ENST00000396581 SSUH2Q9Y2M2 353 aa11.01□□□□□ -0.65
TRIM40-207ENST00000396581 FRYQ5TBA9 3013 aa11.01□□□□□ -0.65
TRIM40-207ENST00000396581 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11□□□□□ -0.65
TRIM40-207ENST00000396581 IGHV3-64DA0A0J9YX35 117 aa11□□□□□ -0.65
TRIM40-207ENST00000396581 SERF1AO75920 110 aa11□□□□□ -0.65
TRIM40-207ENST00000396581 MPV17P39210 176 aa11□□□□□ -0.65
TRIM40-207ENST00000396581 RPL29P47914 159 aaKnown RBP11□□□□□ -0.65
TRIM40-207ENST00000396581 COMPP49747 757 aaPredicted RBP11□□□□□ -0.65
TRIM40-207ENST00000396581 RPL31P62899 125 aaKnown RBP11□□□□□ -0.65
TRIM40-207ENST00000396581 RELBQ01201 579 aa11□□□□□ -0.65
TRIM40-207ENST00000396581 ZNF90Q03938 601 aa11□□□□□ -0.65
TRIM40-207ENST00000396581 CR1LQ2VPA4 569 aa11□□□□□ -0.65
TRIM40-207ENST00000396581 TOMM20LQ6UXN7 152 aa11□□□□□ -0.65
TRIM40-207ENST00000396581 NPVFQ9HCQ7 196 aa11□□□□□ -0.65
TRIM40-207ENST00000396581 USF3Q68DE3 2245 aa11□□□□□ -0.65
TRIM40-207ENST00000396581 IGHV3-43A0A0B4J1X8 118 aa11□□□□□ -0.65
TRIM40-207ENST00000396581 AQP7O14520 342 aa11□□□□□ -0.65
TRIM40-207ENST00000396581 RPLP1P05386 114 aaKnown RBP11□□□□□ -0.65
TRIM40-207ENST00000396581 OR10J4P0C629 311 aa11□□□□□ -0.65
TRIM40-207ENST00000396581 IGHV3-43DP0DP04 118 aa11□□□□□ -0.65
TRIM40-207ENST00000396581 IGHV1-2P23083 117 aa11□□□□□ -0.65
TRIM40-207ENST00000396581 HLA-DRB5Q30154 266 aa11□□□□□ -0.65
TRIM40-207ENST00000396581 EAF1Q96JC9 268 aaPredicted RBP11□□□□□ -0.65
TRIM40-207ENST00000396581 SPRR3Q9UBC9 169 aa11□□□□□ -0.65
TRIM40-207ENST00000396581 METRNQ9UJH8 293 aa11□□□□□ -0.65
TRIM40-207ENST00000396581 MGAQ8IWI9 3026 aa10.99□□□□□ -0.65
TRIM40-207ENST00000396581 MAP1BP46821 2468 aaKnown RBP10.99□□□□□ -0.65
TRIM40-207ENST00000396581 DLEU1O43261 78 aa10.99□□□□□ -0.65
TRIM40-207ENST00000396581 SPINT2O43291 252 aa10.99□□□□□ -0.65
TRIM40-207ENST00000396581 IL6RP08887 468 aaPredicted RBP10.99□□□□□ -0.65
TRIM40-207ENST00000396581 ZNF25P17030 456 aaPredicted RBP10.99□□□□□ -0.65
TRIM40-207ENST00000396581 EFNB3Q15768 340 aa10.99□□□□□ -0.65
TRIM40-207ENST00000396581 TMEM183BQ1AE95 376 aa10.99□□□□□ -0.65
TRIM40-207ENST00000396581 TDRG1Q3Y452 100 aa10.99□□□□□ -0.65
TRIM40-207ENST00000396581 KRTCAP3Q53RY4 240 aa10.99□□□□□ -0.65
TRIM40-207ENST00000396581 PRAMEF5Q5TYX0 476 aa10.99□□□□□ -0.65
TRIM40-207ENST00000396581 PRAMEF6Q5VXH4 476 aa10.99□□□□□ -0.65
TRIM40-207ENST00000396581 INO80CQ6PI98 192 aaPredicted RBP10.99□□□□□ -0.65
TRIM40-207ENST00000396581 OR5AU1Q8NGC0 362 aa10.99□□□□□ -0.65
TRIM40-207ENST00000396581 OR4A16Q8NH70 328 aa10.99□□□□□ -0.65
TRIM40-207ENST00000396581 GNB1LQ9BYB4 327 aa10.99□□□□□ -0.65
TRIM40-207ENST00000396581 OBP2BQ9NPH6 170 aa10.99□□□□□ -0.65
TRIM40-207ENST00000396581 JPT1Q9UK76 154 aa10.99□□□□□ -0.65
TRIM40-207ENST00000396581 V9GYV3 84 aa10.99□□□□□ -0.65
TRIM40-207ENST00000396581 CACNA1GO43497 2377 aa10.99□□□□□ -0.65
TRIM40-207ENST00000396581 FCGR3BO75015 233 aa10.99□□□□□ -0.65
TRIM40-207ENST00000396581 IRF2P14316 349 aa10.99□□□□□ -0.65
TRIM40-207ENST00000396581 G0S2P27469 103 aa10.99□□□□□ -0.65
TRIM40-207ENST00000396581 GPR12P47775 334 aa10.99□□□□□ -0.65
TRIM40-207ENST00000396581 THBS3P49746 956 aa10.99□□□□□ -0.65
TRIM40-207ENST00000396581 ZNF705AQ6ZN79 300 aaPredicted RBP10.99□□□□□ -0.65
TRIM40-207ENST00000396581 TMEM208Q9BTX3 173 aa10.99□□□□□ -0.65
TRIM40-207ENST00000396581 OPN3Q9H1Y3 402 aaPredicted RBP10.99□□□□□ -0.65
TRIM40-207ENST00000396581 HEYLQ9NQ87 328 aaPredicted RBP10.99□□□□□ -0.65
TRIM40-207ENST00000396581 SAA2-SAA4A0A096LPE2 208 aa10.98□□□□□ -0.65
TRIM40-207ENST00000396581 DEFB108AA8MXU0 73 aa10.98□□□□□ -0.65
TRIM40-207ENST00000396581 FNDC10F2Z333 226 aa10.98□□□□□ -0.65
TRIM40-207ENST00000396581 MT-CO2P00403 227 aa10.98□□□□□ -0.65
TRIM40-207ENST00000396581 CD33P20138 364 aa10.98□□□□□ -0.65
TRIM40-207ENST00000396581 RHOBP62745 196 aa10.98□□□□□ -0.65
TRIM40-207ENST00000396581 HOXA4Q00056 320 aaPredicted RBP10.98□□□□□ -0.65
TRIM40-207ENST00000396581 FOXC1Q12948 553 aa10.98□□□□□ -0.65
TRIM40-207ENST00000396581 SMIM21Q3B7S5 101 aa10.98□□□□□ -0.65
TRIM40-207ENST00000396581 MORN2Q502X0 79 aa10.98□□□□□ -0.65
TRIM40-207ENST00000396581 ARSJQ5FYB0 599 aaPredicted RBP10.98□□□□□ -0.65
TRIM40-207ENST00000396581 CXorf67Q86X51 503 aaPredicted RBP10.98□□□□□ -0.65
TRIM40-207ENST00000396581 ZADH2Q8N4Q0 377 aa10.98□□□□□ -0.65
TRIM40-207ENST00000396581 TPRX1Q8N7U7 411 aa10.98□□□□□ -0.65
TRIM40-207ENST00000396581 OR1L6Q8NGR2 347 aa10.98□□□□□ -0.65
TRIM40-207ENST00000396581 RFESDQ8TAC1 157 aa10.98□□□□□ -0.65
TRIM40-207ENST00000396581 HSPB9Q9BQS6 159 aa10.98□□□□□ -0.65
TRIM40-207ENST00000396581 SCNM1Q9BWG6 230 aa10.98□□□□□ -0.65
TRIM40-207ENST00000396581 SFXN3Q9BWM7 321 aa10.98□□□□□ -0.65
TRIM40-207ENST00000396581 SEPSECSQ9HD40 501 aaKnown RBP10.98□□□□□ -0.65
TRIM40-207ENST00000396581 ANKRD11Q6UB99 2663 aaPredicted RBP10.98□□□□□ -0.65
TRIM40-207ENST00000396581 DOCK11Q5JSL3 2073 aa10.98□□□□□ -0.65
TRIM40-207ENST00000396581 A8MXE2 369 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 SLC17A3O00476 420 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 TFF1P04155 84 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 BRS3P32247 399 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 CDKN1AP38936 164 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 PRR20EP86478 221 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 PRR20CP86479 221 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 PRR20DP86480 221 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 PRR20BP86481 221 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 PRR20AP86496 221 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 RPEL1Q2QD12 228 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 MMD2Q8IY49 270 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 ABHD12Q8N2K0 398 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 CD177Q8N6Q3 437 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms