RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 FAM90A1Q86YD7 464 aa14.68□□□□□ -0.06
UBFD1-201ENST00000395878 LINC00518Q8N0U6 118 aa14.68□□□□□ -0.06
UBFD1-201ENST00000395878 CHODLQ9H9P2 273 aa14.68□□□□□ -0.06
UBFD1-201ENST00000395878 ZNF646O15015 1829 aaPredicted RBP14.68□□□□□ -0.06
UBFD1-201ENST00000395878 LOC107984156A0A0G2JMH3 177 aa14.67□□□□□ -0.06
UBFD1-201ENST00000395878 RBFOX2O43251 390 aaKnown RBP eCLIP14.67□□□□□ -0.06
UBFD1-201ENST00000395878 DLX6P56179 175 aa14.67□□□□□ -0.06
UBFD1-201ENST00000395878 MBNL2Q5VZF2 373 aaKnown RBP14.67□□□□□ -0.06
UBFD1-201ENST00000395878 ARL17AQ8IVW1 177 aa14.67□□□□□ -0.06
UBFD1-201ENST00000395878 HIST1H4GQ99525 98 aa14.67□□□□□ -0.06
UBFD1-201ENST00000395878 DMRT1Q9Y5R6 373 aa14.67□□□□□ -0.06
UBFD1-201ENST00000395878 ATXN7O15265 892 aaPredicted RBP14.67□□□□□ -0.06
UBFD1-201ENST00000395878 RSPO4Q2I0M5 234 aaPredicted RBP14.67□□□□□ -0.06
UBFD1-201ENST00000395878 MRPL14Q6P1L8 145 aaKnown RBP14.67□□□□□ -0.06
UBFD1-201ENST00000395878 CLDND2Q8NHS1 167 aa14.67□□□□□ -0.06
UBFD1-201ENST00000395878 IGKV3D-15A0A087WSY6 115 aa14.67□□□□□ -0.06
UBFD1-201ENST00000395878 IGKV3-15P01624 115 aa14.67□□□□□ -0.06
UBFD1-201ENST00000395878 IGHV3-48P01763 117 aa14.67□□□□□ -0.06
UBFD1-201ENST00000395878 LGALS3P17931 250 aaKnown RBP14.67□□□□□ -0.06
UBFD1-201ENST00000395878 SSBP3Q9BWW4 388 aaPredicted RBP14.67□□□□□ -0.06
UBFD1-201ENST00000395878 RAXQ9Y2V3 346 aa14.67□□□□□ -0.06
UBFD1-201ENST00000395878 TDRD6O60522 2096 aaKnown RBP14.67□□□□□ -0.06
UBFD1-201ENST00000395878 GRIFINA4D1Z8 144 aa14.67□□□□□ -0.06
UBFD1-201ENST00000395878 C17orf98A8MV24 154 aa14.67□□□□□ -0.06
UBFD1-201ENST00000395878 TBX6O95947 436 aaPredicted RBP14.67□□□□□ -0.06
UBFD1-201ENST00000395878 CSRP2Q16527 193 aa14.67□□□□□ -0.06
UBFD1-201ENST00000395878 OR13A1Q8NGR1 328 aa14.67□□□□□ -0.06
UBFD1-201ENST00000395878 TAF1LQ8IZX4 1826 aa14.66□□□□□ -0.06
UBFD1-201ENST00000395878 TMEM183AQ8IXX5 376 aa14.66□□□□□ -0.06
UBFD1-201ENST00000395878 PMCHL2Q9BQD1 86 aa14.66□□□□□ -0.06
UBFD1-201ENST00000395878 CACNA1IQ9P0X4 2223 aa14.66□□□□□ -0.06
UBFD1-201ENST00000395878 IGLV3-12A0A075B6K2 115 aa14.66□□□□□ -0.06
UBFD1-201ENST00000395878 IGHV2OR16-5A0A0B4J2B6 119 aa14.66□□□□□ -0.06
UBFD1-201ENST00000395878 KBTBD11-OT1A0A1B0GTJ5 212 aa14.66□□□□□ -0.06
UBFD1-201ENST00000395878 DPM3Q9P2X0 92 aa14.66□□□□□ -0.06
UBFD1-201ENST00000395878 EGR1P18146 543 aa14.66□□□□□ -0.06
UBFD1-201ENST00000395878 MEF2CQ06413 473 aaPredicted RBP14.66□□□□□ -0.06
UBFD1-201ENST00000395878 SBF2Q86WG5 1849 aa14.66□□□□□ -0.06
UBFD1-201ENST00000395878 ASXL3Q9C0F0 2248 aa14.66□□□□□ -0.06
UBFD1-201ENST00000395878 COPS9Q8WXC6 57 aa14.66□□□□□ -0.06
UBFD1-201ENST00000395878 IGHV3OR16-12A0A075B7B8 117 aa14.65□□□□□ -0.06
UBFD1-201ENST00000395878 NBEAP1P0C6P0 100 aa14.65□□□□□ -0.06
UBFD1-201ENST00000395878 SNRPD3P62318 126 aaKnown RBP14.65□□□□□ -0.06
UBFD1-201ENST00000395878 FAM27E3Q08E93 113 aa14.65□□□□□ -0.06
UBFD1-201ENST00000395878 LINC01560Q8TB33 94 aa14.65□□□□□ -0.06
UBFD1-201ENST00000395878 FBLN5Q9UBX5 448 aa14.65□□□□□ -0.06
UBFD1-201ENST00000395878 PRSS8Q16651 343 aa14.65□□□□□ -0.06
UBFD1-201ENST00000395878 KIR2DL4Q99706 377 aa14.65□□□□□ -0.06
UBFD1-201ENST00000395878 AKIRIN1Q9H9L7 192 aaPredicted RBP14.65□□□□□ -0.06
UBFD1-201ENST00000395878 GREB1LQ9C091 1923 aaPredicted RBP14.65□□□□□ -0.06
UBFD1-201ENST00000395878 ARID2Q68CP9 1835 aa14.65□□□□□ -0.06
UBFD1-201ENST00000395878 A0A0G2JMM0 328 aa14.65□□□□□ -0.06
UBFD1-201ENST00000395878 A0A1W2PPB8 328 aa14.65□□□□□ -0.06
UBFD1-201ENST00000395878 A0A1W2PRS3 328 aa14.65□□□□□ -0.06
UBFD1-201ENST00000395878 KIR3DP1A8MWS1 328 aa14.65□□□□□ -0.06
UBFD1-201ENST00000395878 IQCF6A8MYZ5 107 aa14.65□□□□□ -0.06
UBFD1-201ENST00000395878 PROB1E7EW31 1015 aa14.65□□□□□ -0.06
UBFD1-201ENST00000395878 OTX1P32242 354 aaPredicted RBP14.65□□□□□ -0.06
UBFD1-201ENST00000395878 PSG7Q13046 419 aa14.65□□□□□ -0.06
UBFD1-201ENST00000395878 PAPPA-AS1Q5QFB9 102 aa14.65□□□□□ -0.06
UBFD1-201ENST00000395878 OR4D5Q8NGN0 318 aa14.65□□□□□ -0.06
UBFD1-201ENST00000395878 PQLC2LA1A4F0 135 aa14.65□□□□□ -0.06
UBFD1-201ENST00000395878 H7C2G1 150 aa14.65□□□□□ -0.06
UBFD1-201ENST00000395878 SOD3P08294 240 aa14.65□□□□□ -0.06
UBFD1-201ENST00000395878 SRP19P09132 144 aaKnown RBP14.65□□□□□ -0.06
UBFD1-201ENST00000395878 PIKFYVEQ9Y2I7 2098 aa14.64□□□□□ -0.07
UBFD1-201ENST00000395878 RNF222A6NCQ9 220 aa14.64□□□□□ -0.07
UBFD1-201ENST00000395878 CBLN1P23435 193 aa14.64□□□□□ -0.07
UBFD1-201ENST00000395878 ICAM4Q14773 271 aa14.64□□□□□ -0.07
UBFD1-201ENST00000395878 RTN4RL2Q86UN3 420 aa14.64□□□□□ -0.07
UBFD1-201ENST00000395878 MRPL13Q9BYD1 178 aaKnown RBP14.64□□□□□ -0.07
UBFD1-201ENST00000395878 CEP290O15078 2479 aa14.64□□□□□ -0.07
UBFD1-201ENST00000395878 FOXI3A8MTJ6 420 aaPredicted RBP14.64□□□□□ -0.07
UBFD1-201ENST00000395878 DUX5Q96PT3 197 aa14.64□□□□□ -0.07
UBFD1-201ENST00000395878 IL36BQ9NZH7 164 aa14.64□□□□□ -0.07
UBFD1-201ENST00000395878 A8MXK9 166 aa14.64□□□□□ -0.07
UBFD1-201ENST00000395878 IGFBP2P18065 325 aa14.64□□□□□ -0.07
UBFD1-201ENST00000395878 TFF3Q07654 80 aa14.64□□□□□ -0.07
UBFD1-201ENST00000395878 FAM216BQ8N7L0 139 aa14.64□□□□□ -0.07
UBFD1-201ENST00000395878 PRDM6Q9NQX0 595 aa14.64□□□□□ -0.07
UBFD1-201ENST00000395878 PLP1P60201 277 aa14.64□□□□□ -0.07
UBFD1-201ENST00000395878 FAM159AQ6UWV7 190 aa14.64□□□□□ -0.07
UBFD1-201ENST00000395878 ANKRD36A6QL64 1941 aa14.64□□□□□ -0.07
UBFD1-201ENST00000395878 CGAP01215 116 aa14.63□□□□□ -0.07
UBFD1-201ENST00000395878 CIRBPQ14011 172 aaKnown RBP14.63□□□□□ -0.07
UBFD1-201ENST00000395878 TRBV20OR9-2A0A075B6H5 130 aa14.63□□□□□ -0.07
UBFD1-201ENST00000395878 CACNG8Q8WXS5 425 aa14.63□□□□□ -0.07
UBFD1-201ENST00000395878 IGHV1-2P23083 117 aa14.63□□□□□ -0.07
UBFD1-201ENST00000395878 NEU4Q8WWR8 484 aaPredicted RBP14.63□□□□□ -0.07
UBFD1-201ENST00000395878 ZNF837Q96EG3 531 aaPredicted RBP14.63□□□□□ -0.07
UBFD1-201ENST00000395878 FBXL15Q9H469 300 aa14.63□□□□□ -0.07
UBFD1-201ENST00000395878 GFRA3O60609 400 aa14.63□□□□□ -0.07
UBFD1-201ENST00000395878 HIST1H1AQ02539 215 aaPredicted RBP14.63□□□□□ -0.07
UBFD1-201ENST00000395878 ZNF56Q15929 161 aa14.63□□□□□ -0.07
UBFD1-201ENST00000395878 C7orf71A4D174 169 aa14.62□□□□□ -0.07
UBFD1-201ENST00000395878 JOSD1Q15040 202 aaPredicted RBP14.62□□□□□ -0.07
UBFD1-201ENST00000395878 FAM57AQ8TBR7 257 aa14.62□□□□□ -0.07
UBFD1-201ENST00000395878 CCL19Q99731 98 aa14.62□□□□□ -0.07
UBFD1-201ENST00000395878 MYOFQ9NZM1 2061 aa14.62□□□□□ -0.07
UBFD1-201ENST00000395878 PRSS2P07478 247 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms