RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 LGALS9O00182 355 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 PIRO00625 290 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 IGF2P01344 180 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 IFNA7P01567 189 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 HLA-DRB1P01911 266 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 SOD3P08294 240 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 OR12D1P0DN82 309 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 ZNF32P17041 273 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 AZU1P20160 251 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 CNTFRP26992 372 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 CMPK1P30085 196 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 OR10J1P30954 320 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 ZNF140P52738 457 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 CTBP2P56545 445 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 LINC00315P59091 139 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 TAS2R30P59541 319 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 PSG9Q00887 426 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 RHEBQ15382 184 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 ZNF404Q494X3 552 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 MORN2Q502X0 79 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 CLLU1OSQ5K130 101 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 UNQ9165/PRO28630Q6UXU0 137 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 TCF23Q7RTU1 214 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 PDPNQ86YL7 162 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 IFT20Q8IY31 132 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 TMEM86AQ8N2M4 240 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 LY6G5BQ8NDX9 201 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 NUP35Q8NFH5 326 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 TERB2Q8NHR7 220 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 FAM57AQ8TBR7 257 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 ISOC1Q96CN7 298 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 SLC25A44Q96H78 314 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 NMNAT3Q96T66 252 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 ANAPC13Q9BS18 74 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 NIT2Q9NQR4 276 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 LINC00527Q9UJ94 153 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 INSIG2Q9Y5U4 225 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 S4R3C0 116 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 UNC79Q9P2D8 2635 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 DCCP43146 1447 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 WRNQ14191 1432 aaPredicted RBP eCLIP2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 MIA2Q96PC5 1412 aa2.93□□□□□ -1.94
HMGB1P10-201ENST00000395823 hCG_1818297A0A087WSY0 165 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 IGHV2-26A0A0B4J1V2 119 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 LOC389332A0A1B0GUA5 103 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 A8MT66 165 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 KRTAP9-6A8MVA2 160 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 F6UZH7 168 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 INMT-MINDY4F8WBC2 141 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 H3BSA7 217 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 FFAR1O14842 300 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 WISP3O95389 354 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 IFNA17P01571 189 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 GYPCP04921 128 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 SCTP09683 121 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 SCGB1C2P0DMR2 95 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 CPMP14384 443 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 NTF3P20783 257 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 RPS4Y1P22090 263 aaKnown RBP2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 PPIBP23284 216 aaKnown RBP2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 BLVRBP30043 206 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 S100A11P31949 105 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 NCS1P62166 190 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 PPP3R1P63098 170 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 RELAQ04206 551 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 KCNJ8Q15842 424 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 NEDD8Q15843 81 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 ZNF678Q5SXM1 525 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 NXNL2Q5VZ03 156 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 SBSNQ6UWP8 590 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 DEFB128Q7Z7B8 93 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 CTAGE3PQ8IX95 158 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 BAP18Q8IXM2 172 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 C8orf59Q8N0T1 100 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 ACBD7Q8N6N7 88 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 TMEM105Q8N8V8 129 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 ZNF709Q8N972 641 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 TMEM229BQ8NBD8 167 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 SCGB1C1Q8TD33 95 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 ORAOV1Q8WV07 137 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 TWIST2Q8WVJ9 160 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 YPEL4Q96NS1 127 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 SPIN2AQ99865 258 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 SPIN2BQ9BPZ2 258 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 OR2D2Q9H210 308 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 LINC00574Q9H8X3 128 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 POMPQ9Y244 141 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 PCYT1BQ9Y5K3 369 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 PXMP4Q9Y6I8 212 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 ADCY10Q96PN6 1610 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 KIAA0586Q9BVV6 1533 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 KDM5BQ9UGL1 1544 aa2.92□□□□□ -1.94
HMGB1P10-201ENST00000395823 TAF1LQ8IZX4 1826 aa2.91□□□□□ -1.94
HMGB1P10-201ENST00000395823 GRIN2BQ13224 1484 aa2.91□□□□□ -1.94
HMGB1P10-201ENST00000395823 DUXBA0A1W2PPF3 345 aa2.91□□□□□ -1.94
HMGB1P10-201ENST00000395823 C7orf66A4D0T2 115 aa2.91□□□□□ -1.94
HMGB1P10-201ENST00000395823 LRCOL1A6NCL2 159 aa2.91□□□□□ -1.94
HMGB1P10-201ENST00000395823 GYG2O15488 501 aa2.91□□□□□ -1.94
HMGB1P10-201ENST00000395823 TCF21O43680 179 aa2.91□□□□□ -1.94
HMGB1P10-201ENST00000395823 GSTZ1O43708 216 aaPredicted RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms