RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 IGF2RP11717 2491 aa11.47□□□□□ -0.57
SNCA-204ENST00000394989 LOC102723971A0A1B0GUV8 181 aa11.47□□□□□ -0.57
SNCA-204ENST00000394989 FAM90A9PA6NNJ1 464 aa11.47□□□□□ -0.57
SNCA-204ENST00000394989 A8MWP6 167 aa11.47□□□□□ -0.57
SNCA-204ENST00000394989 TMPRSS2O15393 492 aa11.47□□□□□ -0.57
SNCA-204ENST00000394989 RELBQ01201 579 aa11.47□□□□□ -0.57
SNCA-204ENST00000394989 ZNF787Q6DD87 383 aa11.47□□□□□ -0.57
SNCA-204ENST00000394989 C1orf87Q8N0U7 546 aa11.47□□□□□ -0.57
SNCA-204ENST00000394989 S1PR3Q99500 378 aa11.47□□□□□ -0.57
SNCA-204ENST00000394989 TMEM147Q9BVK8 224 aa11.47□□□□□ -0.57
SNCA-204ENST00000394989 MBP02144 154 aa11.47□□□□□ -0.57
SNCA-204ENST00000394989 RPL29P47914 159 aaKnown RBP11.47□□□□□ -0.57
SNCA-204ENST00000394989 RAB7AP51149 207 aa11.47□□□□□ -0.57
SNCA-204ENST00000394989 PRAMEF5Q5TYX0 476 aa11.47□□□□□ -0.57
SNCA-204ENST00000394989 MRPL41Q8IXM3 137 aaKnown RBP11.47□□□□□ -0.57
SNCA-204ENST00000394989 ZNRD1Q9P1U0 126 aa11.47□□□□□ -0.57
SNCA-204ENST00000394989 TIMM9Q9Y5J7 89 aa11.47□□□□□ -0.57
SNCA-204ENST00000394989 AMBPP02760 352 aa11.46□□□□□ -0.57
SNCA-204ENST00000394989 IRF2P14316 349 aa11.46□□□□□ -0.57
SNCA-204ENST00000394989 NUTF2P61970 127 aaKnown RBP11.46□□□□□ -0.57
SNCA-204ENST00000394989 GNB2P62879 340 aa11.46□□□□□ -0.57
SNCA-204ENST00000394989 ATP6V1FQ16864 119 aa11.46□□□□□ -0.57
SNCA-204ENST00000394989 CORO2AQ92828 525 aa11.46□□□□□ -0.57
SNCA-204ENST00000394989 PINX1Q96BK5 328 aaKnown RBP11.46□□□□□ -0.57
SNCA-204ENST00000394989 NEU1Q99519 415 aa11.46□□□□□ -0.57
SNCA-204ENST00000394989 TMEM140Q9NV12 185 aa11.46□□□□□ -0.57
SNCA-204ENST00000394989 YLPM1P49750 1951 aaKnown RBP11.46□□□□□ -0.58
SNCA-204ENST00000394989 TNFRSF1AP19438 455 aa11.46□□□□□ -0.58
SNCA-204ENST00000394989 GNG10P50151 68 aa11.46□□□□□ -0.58
SNCA-204ENST00000394989 ADIRFQ15847 76 aa11.46□□□□□ -0.58
SNCA-204ENST00000394989 PDLIM3Q53GG5 364 aaPredicted RBP11.46□□□□□ -0.58
SNCA-204ENST00000394989 Q8N7P7 452 aa11.46□□□□□ -0.58
SNCA-204ENST00000394989 IDI2-AS1Q9NZ38 188 aa11.46□□□□□ -0.58
SNCA-204ENST00000394989 PKDREJQ9NTG1 2253 aa11.45□□□□□ -0.58
SNCA-204ENST00000394989 SCGB1D1O95968 90 aa11.45□□□□□ -0.58
SNCA-204ENST00000394989 FGF7P21781 194 aa11.45□□□□□ -0.58
SNCA-204ENST00000394989 PMS2P11Q13670 270 aa11.45□□□□□ -0.58
SNCA-204ENST00000394989 LYG1Q8N1E2 194 aa11.45□□□□□ -0.58
SNCA-204ENST00000394989 NEUROG1Q92886 237 aa11.45□□□□□ -0.58
SNCA-204ENST00000394989 NPCDR1Q9BY65 106 aa11.45□□□□□ -0.58
SNCA-204ENST00000394989 SHISA9B4DS77 424 aa11.45□□□□□ -0.58
SNCA-204ENST00000394989 PCP4P48539 62 aa11.45□□□□□ -0.58
SNCA-204ENST00000394989 OR4A16Q8NH70 328 aa11.45□□□□□ -0.58
SNCA-204ENST00000394989 DIRC2Q96SL1 478 aa11.45□□□□□ -0.58
SNCA-204ENST00000394989 C2orf88Q9BSF0 95 aa11.45□□□□□ -0.58
SNCA-204ENST00000394989 SNHG12Q9BXW3 62 aa11.45□□□□□ -0.58
SNCA-204ENST00000394989 XKRY2A2RUG3 117 aa11.44□□□□□ -0.58
SNCA-204ENST00000394989 BCL2P10415 239 aa11.44□□□□□ -0.58
SNCA-204ENST00000394989 VDAC2P45880 294 aaPredicted RBP11.44□□□□□ -0.58
SNCA-204ENST00000394989 ZNF705AQ6ZN79 300 aaPredicted RBP11.44□□□□□ -0.58
SNCA-204ENST00000394989 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.44□□□□□ -0.58
SNCA-204ENST00000394989 OR4X1Q8NH49 305 aa11.44□□□□□ -0.58
SNCA-204ENST00000394989 TMEM170AQ8WVE7 144 aa11.44□□□□□ -0.58
SNCA-204ENST00000394989 ZCCHC14Q8WYQ9 949 aaKnown RBP11.44□□□□□ -0.58
SNCA-204ENST00000394989 RND1Q92730 232 aa11.44□□□□□ -0.58
SNCA-204ENST00000394989 SAP30LQ9HAJ7 183 aa11.44□□□□□ -0.58
SNCA-204ENST00000394989 RPUSD1Q9UJJ7 312 aaKnown RBP11.44□□□□□ -0.58
SNCA-204ENST00000394989 MSRB2Q9Y3D2 182 aa11.44□□□□□ -0.58
SNCA-204ENST00000394989 A0A1B0GUS0 222 aa11.44□□□□□ -0.58
SNCA-204ENST00000394989 A0A1W2PPQ1 181 aa11.44□□□□□ -0.58
SNCA-204ENST00000394989 MAP1LC3B2A6NCE7 125 aa11.44□□□□□ -0.58
SNCA-204ENST00000394989 MRPS11P82912 194 aaKnown RBP11.44□□□□□ -0.58
SNCA-204ENST00000394989 OR4S2Q8NH73 311 aa11.44□□□□□ -0.58
SNCA-204ENST00000394989 MAP1LC3BQ9GZQ8 125 aa11.44□□□□□ -0.58
SNCA-204ENST00000394989 RAB9BQ9NP90 201 aa11.44□□□□□ -0.58
SNCA-204ENST00000394989 AURKAIP1Q9NWT8 199 aaPredicted RBP11.44□□□□□ -0.58
SNCA-204ENST00000394989 CISD1Q9NZ45 108 aaKnown RBP11.44□□□□□ -0.58
SNCA-204ENST00000394989 TACC2O95359 2948 aa11.44□□□□□ -0.58
SNCA-204ENST00000394989 RRHO14718 337 aa11.44□□□□□ -0.58
SNCA-204ENST00000394989 KIR2DS2P43631 304 aa11.44□□□□□ -0.58
SNCA-204ENST00000394989 OR52E5Q8NH55 327 aa11.44□□□□□ -0.58
SNCA-204ENST00000394989 ELOA3CA0A087WX78 387 aaPredicted RBP11.43□□□□□ -0.58
SNCA-204ENST00000394989 PRSS46E5RG02 174 aa11.43□□□□□ -0.58
SNCA-204ENST00000394989 TMEM178BH3BS89 294 aa11.43□□□□□ -0.58
SNCA-204ENST00000394989 GFRA3O60609 400 aa11.43□□□□□ -0.58
SNCA-204ENST00000394989 DEFA4P12838 97 aa11.43□□□□□ -0.58
SNCA-204ENST00000394989 ERVK-16P61578 105 aa11.43□□□□□ -0.58
SNCA-204ENST00000394989 FAM90A2PQ658T7 463 aa11.43□□□□□ -0.58
SNCA-204ENST00000394989 SLC25A48Q6ZT89 311 aaKnown RBP11.43□□□□□ -0.58
SNCA-204ENST00000394989 SLC25A10Q9UBX3 287 aaPredicted RBP11.43□□□□□ -0.58
SNCA-204ENST00000394989 LINC00312Q9Y6C7 94 aa11.43□□□□□ -0.58
SNCA-204ENST00000394989 E7EQL1 145 aa11.43□□□□□ -0.58
SNCA-204ENST00000394989 CLDN34H7C241 214 aa11.43□□□□□ -0.58
SNCA-204ENST00000394989 OR4A47Q6IF82 309 aa11.43□□□□□ -0.58
SNCA-204ENST00000394989 OR10G4Q8NGN3 311 aa11.43□□□□□ -0.58
SNCA-204ENST00000394989 RPUSD4Q96CM3 377 aaKnown RBP11.43□□□□□ -0.58
SNCA-204ENST00000394989 NDUFAF3Q9BU61 184 aa11.43□□□□□ -0.58
SNCA-204ENST00000394989 THBS3P49746 956 aa11.42□□□□□ -0.58
SNCA-204ENST00000394989 JOSD1Q15040 202 aaPredicted RBP11.42□□□□□ -0.58
SNCA-204ENST00000394989 ABHD12Q8N2K0 398 aa11.42□□□□□ -0.58
SNCA-204ENST00000394989 CCL17Q92583 94 aa11.42□□□□□ -0.58
SNCA-204ENST00000394989 RNASE6Q93091 150 aaKnown RBP11.42□□□□□ -0.58
SNCA-204ENST00000394989 VKORC1Q9BQB6 163 aa11.42□□□□□ -0.58
SNCA-204ENST00000394989 SLC25A22Q9H936 323 aa11.42□□□□□ -0.58
SNCA-204ENST00000394989 POLEQ07864 2286 aa11.42□□□□□ -0.58
SNCA-204ENST00000394989 TRAV38-1A0A0B4J264 116 aa11.42□□□□□ -0.58
SNCA-204ENST00000394989 C15orf61A6NNL5 157 aa11.42□□□□□ -0.58
SNCA-204ENST00000394989 TNFRSF13BO14836 293 aaPredicted RBP11.42□□□□□ -0.58
SNCA-204ENST00000394989 NPSP0C0P6 89 aa11.42□□□□□ -0.58
SNCA-204ENST00000394989 CT45A6P0DMU7 189 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms