RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 PRSS46E5RG02 174 aa11.09□□□□□ -0.63
GTF2F1-201ENST00000394456 HTD2P86397 168 aa11.09□□□□□ -0.63
GTF2F1-201ENST00000394456 DOLPP1Q86YN1 238 aa11.09□□□□□ -0.63
GTF2F1-201ENST00000394456 POLEQ07864 2286 aa11.09□□□□□ -0.63
GTF2F1-201ENST00000394456 SCO2A0A1W2PP80 73 aa11.09□□□□□ -0.63
GTF2F1-201ENST00000394456 XKRY2A2RUG3 117 aa11.09□□□□□ -0.63
GTF2F1-201ENST00000394456 HIST1H1BP16401 226 aaKnown RBP11.09□□□□□ -0.63
GTF2F1-201ENST00000394456 THBS3P49746 956 aa11.09□□□□□ -0.63
GTF2F1-201ENST00000394456 PMS2P11Q13670 270 aa11.09□□□□□ -0.63
GTF2F1-201ENST00000394456 C17orf58Q2M2W7 97 aa11.09□□□□□ -0.63
GTF2F1-201ENST00000394456 LINC01551Q86U37 167 aa11.09□□□□□ -0.63
GTF2F1-201ENST00000394456 ZCCHC24Q8N2G6 241 aaKnown RBP11.09□□□□□ -0.63
GTF2F1-201ENST00000394456 FAM169BQ8N8A8 192 aa11.09□□□□□ -0.63
GTF2F1-201ENST00000394456 GGTLC1Q9BX51 225 aa11.09□□□□□ -0.63
GTF2F1-201ENST00000394456 MANBALQ9NQG1 85 aa11.09□□□□□ -0.63
GTF2F1-201ENST00000394456 TUBG2Q9NRH3 451 aa11.09□□□□□ -0.63
GTF2F1-201ENST00000394456 CALYQ9NYX4 217 aa11.09□□□□□ -0.63
GTF2F1-201ENST00000394456 A8MXE2 369 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 HRASP01112 189 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 ADH4P08319 380 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 GPX4P36969 197 aaPredicted RBP11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 TDGF1P3P51864 188 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 ACOT6Q3I5F7 207 aaPredicted RBP11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 ARSJQ5FYB0 599 aaPredicted RBP11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 TCF23Q7RTU1 214 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 SEPSECSQ9HD40 501 aaKnown RBP11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 TCF19Q9Y242 345 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 YTHDF2Q9Y5A9 579 aaKnown RBP11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 PXMP4Q9Y6I8 212 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 ATRXP46100 2492 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 ELOA3CA0A087WX78 387 aaPredicted RBP11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 SAA2-SAA4A0A096LPE2 208 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 A0A0G2JNJ9 132 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 ZNF729A6NN14 1252 aaPredicted RBP11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 PPP5D1E7EU14 171 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 HPRT1P00492 218 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 MBP02144 154 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 SAA2P0DJI9 122 aaPredicted RBP11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 TBR1Q16650 682 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 OR5B12Q96R08 314 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 Q9UFV3 132 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 YLPM1P49750 1951 aaKnown RBP11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 A0A1W2PPV4 95 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 PRRG2O14669 202 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 FRMD6-AS1P0C7T7 363 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 CCKARP32238 428 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 KLF3P57682 345 aaPredicted RBP11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 MLANAQ16655 118 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 FAM216BQ8N7L0 139 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 OR1P1Q8NH06 330 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 S1PR3Q99500 378 aa11.08□□□□□ -0.64
GTF2F1-201ENST00000394456 CHD8Q9HCK8 2581 aa11.07□□□□□ -0.64
GTF2F1-201ENST00000394456 C17orf112F2Z3M2 114 aa11.07□□□□□ -0.64
GTF2F1-201ENST00000394456 MGST3O14880 152 aa11.07□□□□□ -0.64
GTF2F1-201ENST00000394456 IL3RAP26951 378 aa11.07□□□□□ -0.64
GTF2F1-201ENST00000394456 SPCS3P61009 180 aa11.07□□□□□ -0.64
GTF2F1-201ENST00000394456 ASPHD1Q5U4P2 390 aa11.07□□□□□ -0.64
GTF2F1-201ENST00000394456 GFRALQ6UXV0 394 aa11.07□□□□□ -0.64
GTF2F1-201ENST00000394456 TMEM183AQ8IXX5 376 aa11.07□□□□□ -0.64
GTF2F1-201ENST00000394456 OR2T10Q8NGZ9 312 aa11.07□□□□□ -0.64
GTF2F1-201ENST00000394456 PITPNC1Q9UKF7 332 aa11.07□□□□□ -0.64
GTF2F1-201ENST00000394456 FAM87AP0C7U9 286 aa11.07□□□□□ -0.64
GTF2F1-201ENST00000394456 GATA2P23769 480 aaPredicted RBP11.07□□□□□ -0.64
GTF2F1-201ENST00000394456 GLRXP35754 106 aa11.07□□□□□ -0.64
GTF2F1-201ENST00000394456 LYG1Q8N1E2 194 aa11.07□□□□□ -0.64
GTF2F1-201ENST00000394456 DDB2Q92466 427 aa11.07□□□□□ -0.64
GTF2F1-201ENST00000394456 CCL13Q99616 98 aa11.07□□□□□ -0.64
GTF2F1-201ENST00000394456 JPT1Q9UK76 154 aa11.07□□□□□ -0.64
GTF2F1-201ENST00000394456 NUPR1O60356 82 aa11.06□□□□□ -0.64
GTF2F1-201ENST00000394456 YPEL1O60688 119 aa11.06□□□□□ -0.64
GTF2F1-201ENST00000394456 ACTL6BO94805 426 aa11.06□□□□□ -0.64
GTF2F1-201ENST00000394456 C14orf144Q96I85 54 aa11.06□□□□□ -0.64
GTF2F1-201ENST00000394456 YPEL2Q96QA6 119 aa11.06□□□□□ -0.64
GTF2F1-201ENST00000394456 SSUH2Q9Y2M2 353 aa11.06□□□□□ -0.64
GTF2F1-201ENST00000394456 CA2P00918 260 aa11.06□□□□□ -0.64
GTF2F1-201ENST00000394456 IGKV1-16P04430 117 aa11.06□□□□□ -0.64
GTF2F1-201ENST00000394456 GZMBP10144 247 aa11.06□□□□□ -0.64
GTF2F1-201ENST00000394456 HLA-DRB5Q30154 266 aa11.06□□□□□ -0.64
GTF2F1-201ENST00000394456 OR4A47Q6IF82 309 aa11.06□□□□□ -0.64
GTF2F1-201ENST00000394456 DIRC2Q96SL1 478 aa11.06□□□□□ -0.64
GTF2F1-201ENST00000394456 A0A1B0GWJ7 208 aa11.05□□□□□ -0.64
GTF2F1-201ENST00000394456 IL6RP08887 468 aaPredicted RBP11.05□□□□□ -0.64
GTF2F1-201ENST00000394456 CGB3P0DN86 165 aa11.05□□□□□ -0.64
GTF2F1-201ENST00000394456 CGB7P0DN87 165 aa11.05□□□□□ -0.64
GTF2F1-201ENST00000394456 IGFBP2P18065 325 aa11.05□□□□□ -0.64
GTF2F1-201ENST00000394456 ERVK-16P61578 105 aa11.05□□□□□ -0.64
GTF2F1-201ENST00000394456 PDLIM3Q53GG5 364 aaPredicted RBP11.05□□□□□ -0.64
GTF2F1-201ENST00000394456 C1orf174Q8IYL3 243 aa11.05□□□□□ -0.64
GTF2F1-201ENST00000394456 RND1Q92730 232 aa11.05□□□□□ -0.64
GTF2F1-201ENST00000394456 RAI1Q7Z5J4 1906 aaPredicted RBP11.05□□□□□ -0.64
GTF2F1-201ENST00000394456 SRRM4A7MD48 611 aaKnown RBP11.05□□□□□ -0.64
GTF2F1-201ENST00000394456 K7ENP7 123 aa11.05□□□□□ -0.64
GTF2F1-201ENST00000394456 F2RL2O00254 374 aa11.05□□□□□ -0.64
GTF2F1-201ENST00000394456 SLC17A3O00476 420 aa11.05□□□□□ -0.64
GTF2F1-201ENST00000394456 GGCTO75223 188 aaKnown RBP11.05□□□□□ -0.64
GTF2F1-201ENST00000394456 CD33P20138 364 aa11.05□□□□□ -0.64
GTF2F1-201ENST00000394456 ACTL10Q5JWF8 245 aa11.05□□□□□ -0.64
GTF2F1-201ENST00000394456 WFDC8Q8IUA0 241 aa11.05□□□□□ -0.64
GTF2F1-201ENST00000394456 TMEM256Q8N2U0 113 aa11.05□□□□□ -0.64
GTF2F1-201ENST00000394456 DYSFO75923 2080 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms