RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 LSM10Q969L4 123 aaKnown RBP8.85□□□□□ -0.99
CALD1-203ENST00000393118 MED12LQ86YW9 2145 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 CFAP54Q96N23 3096 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 TRGV8A0A0C4DH27 118 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 TMEM50AO95807 157 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 ADH4P08319 380 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 RPL39P5Q59GN2 51 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 RCC1LQ96I51 464 aaKnown RBP8.84□□□□□ -0.99
CALD1-203ENST00000393118 COMMD5Q9GZQ3 224 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 ZNF430Q9H8G1 570 aaPredicted RBP8.84□□□□□ -0.99
CALD1-203ENST00000393118 GP6Q9HCN6 339 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 IGHV2OR16-5A0A0B4J2B6 119 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 IQCF6A8MYZ5 107 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 GYPAP02724 150 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 FAM27E3Q08E93 113 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 RTL8BQ17RB0 113 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 MRGPRGQ86SM5 289 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 SLC24A4Q8NFF2 622 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 NUDT10Q8NFP7 164 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 WNT10AQ9GZT5 417 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 PRO3102Q9H379 93 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 METRNQ9UJH8 293 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 M0QZ24 198 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 MGST3O14880 152 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 SS18L1O75177 396 aaPredicted RBP8.84□□□□□ -0.99
CALD1-203ENST00000393118 CD99P14209 185 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 CEACAM8P31997 349 aaPredicted RBP8.84□□□□□ -0.99
CALD1-203ENST00000393118 KIR2DL2P43627 348 aaPredicted RBP8.84□□□□□ -0.99
CALD1-203ENST00000393118 REG1BP48304 166 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 ACSF3Q4G176 576 aaPredicted RBP8.84□□□□□ -0.99
CALD1-203ENST00000393118 PCSK4Q6UW60 755 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 SGMS2Q8NHU3 365 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 RNF7Q9UBF6 113 aa8.84□□□□□ -0.99
CALD1-203ENST00000393118 SERF2P84101 59 aa8.83□□□□□ -1
CALD1-203ENST00000393118 Q56UQ5 140 aa8.83□□□□□ -1
CALD1-203ENST00000393118 WDR82Q6UXN9 313 aa8.83□□□□□ -1
CALD1-203ENST00000393118 PARLQ9H300 379 aa8.83□□□□□ -1
CALD1-203ENST00000393118 VSIRQ9H7M9 311 aa8.83□□□□□ -1
CALD1-203ENST00000393118 IFNL4K9M1U5 179 aa8.83□□□□□ -1
CALD1-203ENST00000393118 CIDEAO60543 219 aa8.83□□□□□ -1
CALD1-203ENST00000393118 ZNF253O75346 499 aa8.83□□□□□ -1
CALD1-203ENST00000393118 USF1P22415 310 aaPredicted RBP8.83□□□□□ -1
CALD1-203ENST00000393118 TRAT1Q6PIZ9 186 aa8.83□□□□□ -1
CALD1-203ENST00000393118 OR4S2Q8NH73 311 aa8.83□□□□□ -1
CALD1-203ENST00000393118 NGBQ9NPG2 151 aa8.83□□□□□ -1
CALD1-203ENST00000393118 TRAV38-1A0A0B4J264 116 aa8.83□□□□□ -1
CALD1-203ENST00000393118 IGKV1-5P01602 117 aa8.83□□□□□ -1
CALD1-203ENST00000393118 TNFRSF1AP19438 455 aa8.83□□□□□ -1
CALD1-203ENST00000393118 RBPJQ06330 500 aa8.83□□□□□ -1
CALD1-203ENST00000393118 ICAM4Q14773 271 aa8.83□□□□□ -1
CALD1-203ENST00000393118 STUMQ69YW2 141 aa8.83□□□□□ -1
CALD1-203ENST00000393118 Q6P435 159 aa8.83□□□□□ -1
CALD1-203ENST00000393118 OR4B1Q8NGF8 309 aa8.83□□□□□ -1
CALD1-203ENST00000393118 LAMTOR2Q9Y2Q5 125 aa8.83□□□□□ -1
CALD1-203ENST00000393118 C11orf94C9JXX5 98 aa8.83□□□□□ -1
CALD1-203ENST00000393118 J3QW42 95 aa8.83□□□□□ -1
CALD1-203ENST00000393118 DEFA4P12838 97 aa8.83□□□□□ -1
CALD1-203ENST00000393118 EGR1P18146 543 aa8.83□□□□□ -1
CALD1-203ENST00000393118 IER3P46695 156 aa8.83□□□□□ -1
CALD1-203ENST00000393118 SLC35E4Q6ICL7 350 aa8.83□□□□□ -1
CALD1-203ENST00000393118 ABHD12Q8N2K0 398 aa8.83□□□□□ -1
CALD1-203ENST00000393118 UHRF2Q96PU4 802 aa8.83□□□□□ -1
CALD1-203ENST00000393118 WDR61Q9GZS3 305 aaKnown RBP8.83□□□□□ -1
CALD1-203ENST00000393118 CELSR3Q9NYQ7 3312 aa8.82□□□□□ -1
CALD1-203ENST00000393118 A0A1B0GUS0 222 aa8.82□□□□□ -1
CALD1-203ENST00000393118 RPL30P62888 115 aaKnown RBP8.82□□□□□ -1
CALD1-203ENST00000393118 FBLN7Q53RD9 439 aa8.82□□□□□ -1
CALD1-203ENST00000393118 WDR86Q86TI4 376 aa8.82□□□□□ -1
CALD1-203ENST00000393118 POLR3KQ9Y2Y1 108 aaPredicted RBP8.82□□□□□ -1
CALD1-203ENST00000393118 CTXND1A0A1B0GTU2 59 aa8.82□□□□□ -1
CALD1-203ENST00000393118 GALR2O43603 387 aaPredicted RBP8.82□□□□□ -1
CALD1-203ENST00000393118 CD1BP29016 333 aa8.82□□□□□ -1
CALD1-203ENST00000393118 TCL1AP56279 114 aa8.82□□□□□ -1
CALD1-203ENST00000393118 ZCCHC24Q8N2G6 241 aaKnown RBP8.82□□□□□ -1
CALD1-203ENST00000393118 TMEM256Q8N2U0 113 aa8.82□□□□□ -1
CALD1-203ENST00000393118 ZNF525Q8N782 197 aa8.82□□□□□ -1
CALD1-203ENST00000393118 QTRT1Q9BXR0 403 aaKnown RBP8.82□□□□□ -1
CALD1-203ENST00000393118 CACNA1BQ00975 2339 aa8.82□□□□□ -1
CALD1-203ENST00000393118 MLNRO43193 412 aa8.82□□□□□ -1
CALD1-203ENST00000393118 SLC35B1P78383 322 aa8.82□□□□□ -1
CALD1-203ENST00000393118 MEF2BQ02080 365 aaPredicted RBP8.82□□□□□ -1
CALD1-203ENST00000393118 ZNF506Q5JVG8 444 aa8.82□□□□□ -1
CALD1-203ENST00000393118 Q6ZVH6 145 aa8.82□□□□□ -1
CALD1-203ENST00000393118 GBGT1Q8N5D6 347 aa8.82□□□□□ -1
CALD1-203ENST00000393118 NEIL1Q96FI4 390 aaPredicted RBP8.82□□□□□ -1
CALD1-203ENST00000393118 IMMP2LQ96T52 175 aa8.82□□□□□ -1
CALD1-203ENST00000393118 CALYQ9NYX4 217 aa8.82□□□□□ -1
CALD1-203ENST00000393118 CEP295Q9C0D2 2601 aa8.81□□□□□ -1
CALD1-203ENST00000393118 PRSS47A8MTI9 375 aa8.81□□□□□ -1
CALD1-203ENST00000393118 BRS3P32247 399 aa8.81□□□□□ -1
CALD1-203ENST00000393118 GNB1P62873 340 aa8.81□□□□□ -1
CALD1-203ENST00000393118 SNURFLB1AK76 121 aa8.81□□□□□ -1
CALD1-203ENST00000393118 WISP2O76076 250 aa8.81□□□□□ -1
CALD1-203ENST00000393118 THBS3P49746 956 aa8.81□□□□□ -1
CALD1-203ENST00000393118 TFF3Q07654 80 aa8.81□□□□□ -1
CALD1-203ENST00000393118 HLA-DRB5Q30154 266 aa8.81□□□□□ -1
CALD1-203ENST00000393118 KIAA1644Q3SXP7 199 aa8.81□□□□□ -1
CALD1-203ENST00000393118 RBMXL3Q8N7X1 1067 aaKnown RBP8.81□□□□□ -1
CALD1-203ENST00000393118 KCNIP2Q9NS61 270 aa8.81□□□□□ -1
CALD1-203ENST00000393118 IGHV1-18A0A0C4DH31 117 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms