RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 CRYGCP07315 174 aa12.5□□□□□ -0.41
PTPRK-208ENST00000392449 CTRB1P17538 263 aa12.5□□□□□ -0.41
PTPRK-208ENST00000392449 MAS1LP35410 378 aa12.5□□□□□ -0.41
PTPRK-208ENST00000392449 ARL3P36405 182 aa12.5□□□□□ -0.41
PTPRK-208ENST00000392449 GUCA2BQ16661 112 aa12.5□□□□□ -0.41
PTPRK-208ENST00000392449 CTRB2Q6GPI1 263 aa12.5□□□□□ -0.41
PTPRK-208ENST00000392449 OR51H1Q8NH63 302 aa12.5□□□□□ -0.41
PTPRK-208ENST00000392449 CEPT1Q9Y6K0 416 aa12.5□□□□□ -0.41
PTPRK-208ENST00000392449 RBMY1BA6NDE4 496 aaKnown RBP12.49□□□□□ -0.41
PTPRK-208ENST00000392449 RBMY1EA6NEQ0 496 aaKnown RBP12.49□□□□□ -0.41
PTPRK-208ENST00000392449 RBMY1DP0C7P1 496 aaKnown RBP12.49□□□□□ -0.41
PTPRK-208ENST00000392449 KIR2DS2P43631 304 aa12.49□□□□□ -0.41
PTPRK-208ENST00000392449 SCAND1P57086 179 aa12.49□□□□□ -0.41
PTPRK-208ENST00000392449 LINC00322Q6ZN03 302 aaPredicted RBP12.49□□□□□ -0.41
PTPRK-208ENST00000392449 OR2K2Q8NGT1 345 aa12.49□□□□□ -0.41
PTPRK-208ENST00000392449 BET1LQ9NYM9 111 aa12.49□□□□□ -0.41
PTPRK-208ENST00000392449 ZNF320A2RRD8 509 aa12.48□□□□□ -0.41
PTPRK-208ENST00000392449 TPPPO94811 219 aa12.48□□□□□ -0.41
PTPRK-208ENST00000392449 S1PR2O95136 353 aa12.48□□□□□ -0.41
PTPRK-208ENST00000392449 OR2B8PP59922 312 aa12.48□□□□□ -0.41
PTPRK-208ENST00000392449 HIPK2Q9H2X6 1198 aa12.48□□□□□ -0.41
PTPRK-208ENST00000392449 DIABLOQ9NR28 239 aa12.48□□□□□ -0.41
PTPRK-208ENST00000392449 IGLV11-55A0A075B6I3 123 aa12.47□□□□□ -0.41
PTPRK-208ENST00000392449 A0A0A6YYH2 397 aa12.47□□□□□ -0.41
PTPRK-208ENST00000392449 IGHV3-35A0A0C4DH35 117 aa12.47□□□□□ -0.41
PTPRK-208ENST00000392449 LCE6AA0A183 80 aa12.47□□□□□ -0.41
PTPRK-208ENST00000392449 IGLC7A0M8Q6 106 aa12.47□□□□□ -0.41
PTPRK-208ENST00000392449 TMEM213A2RRL7 107 aa12.47□□□□□ -0.41
PTPRK-208ENST00000392449 A6NJ64 397 aa12.47□□□□□ -0.41
PTPRK-208ENST00000392449 LGALS9O00182 355 aa12.47□□□□□ -0.41
PTPRK-208ENST00000392449 DEFA4P12838 97 aa12.47□□□□□ -0.41
PTPRK-208ENST00000392449 CBLN1P23435 193 aa12.47□□□□□ -0.41
PTPRK-208ENST00000392449 LSM3P62310 102 aaKnown RBP12.47□□□□□ -0.41
PTPRK-208ENST00000392449 MSMO1Q15800 293 aa12.47□□□□□ -0.41
PTPRK-208ENST00000392449 TMEM61Q8N0U2 210 aa12.47□□□□□ -0.41
PTPRK-208ENST00000392449 OR5AP2Q8NGF4 316 aa12.47□□□□□ -0.41
PTPRK-208ENST00000392449 OR10W1Q8NGF6 305 aa12.47□□□□□ -0.41
PTPRK-208ENST00000392449 EEF1AKMT3Q96AZ1 226 aa12.47□□□□□ -0.41
PTPRK-208ENST00000392449 SRD5A3Q9H8P0 318 aa12.47□□□□□ -0.41
PTPRK-208ENST00000392449 SLC2A8Q9NY64 477 aa12.47□□□□□ -0.41
PTPRK-208ENST00000392449 MLXQ9UH92 298 aa12.47□□□□□ -0.41
PTPRK-208ENST00000392449 OR11H12B2RN74 326 aa12.46□□□□□ -0.41
PTPRK-208ENST00000392449 UPK2O00526 184 aa12.46□□□□□ -0.41
PTPRK-208ENST00000392449 RFX2P48378 723 aa12.46□□□□□ -0.41
PTPRK-208ENST00000392449 AADACL3Q5VUY0 350 aa12.46□□□□□ -0.41
PTPRK-208ENST00000392449 UNQ9165/PRO28630Q6UXU0 137 aa12.46□□□□□ -0.41
PTPRK-208ENST00000392449 GPHB5Q86YW7 130 aa12.46□□□□□ -0.41
PTPRK-208ENST00000392449 OR4A5Q8NH83 315 aa12.46□□□□□ -0.41
PTPRK-208ENST00000392449 TMEM140Q9NV12 185 aa12.46□□□□□ -0.41
PTPRK-208ENST00000392449 EHFQ9NZC4 300 aa12.46□□□□□ -0.41
PTPRK-208ENST00000392449 DNAH1Q9P2D7 4330 aa12.46□□□□□ -0.41
PTPRK-208ENST00000392449 RBFOX2O43251 390 aaKnown RBP eCLIP12.46□□□□□ -0.42
PTPRK-208ENST00000392449 IFNA6P05013 189 aa12.46□□□□□ -0.42
PTPRK-208ENST00000392449 CLEC3BP05452 202 aa12.46□□□□□ -0.42
PTPRK-208ENST00000392449 GNRHRP30968 328 aa12.46□□□□□ -0.42
PTPRK-208ENST00000392449 GPR183P32249 361 aa12.46□□□□□ -0.42
PTPRK-208ENST00000392449 RPS19P39019 145 aaKnown RBP12.46□□□□□ -0.42
PTPRK-208ENST00000392449 TAS2R31P59538 309 aa12.46□□□□□ -0.42
PTPRK-208ENST00000392449 CATR1Q13166 79 aa12.46□□□□□ -0.42
PTPRK-208ENST00000392449 KCTD21Q4G0X4 260 aa12.46□□□□□ -0.42
PTPRK-208ENST00000392449 TM4SF20Q53R12 229 aa12.46□□□□□ -0.42
PTPRK-208ENST00000392449 FAM209BQ5JX69 171 aa12.46□□□□□ -0.42
PTPRK-208ENST00000392449 LAX1Q8IWV1 398 aa12.46□□□□□ -0.42
PTPRK-208ENST00000392449 ZBTB34Q8NCN2 500 aa12.46□□□□□ -0.42
PTPRK-208ENST00000392449 DMBX1Q8NFW5 382 aa12.46□□□□□ -0.42
PTPRK-208ENST00000392449 GIMAP1Q8WWP7 306 aa12.46□□□□□ -0.42
PTPRK-208ENST00000392449 IFT46Q9NQC8 304 aa12.46□□□□□ -0.42
PTPRK-208ENST00000392449 HYDINQ4G0P3 5121 aa12.45□□□□□ -0.42
PTPRK-208ENST00000392449 XRCC3O43542 346 aa12.45□□□□□ -0.42
PTPRK-208ENST00000392449 SCAF4O95104 1147 aaKnown RBP12.45□□□□□ -0.42
PTPRK-208ENST00000392449 DHFRP00374 187 aa12.45□□□□□ -0.42
PTPRK-208ENST00000392449 HPRT1P00492 218 aa12.45□□□□□ -0.42
PTPRK-208ENST00000392449 PMP2P02689 132 aa12.45□□□□□ -0.42
PTPRK-208ENST00000392449 RLN1P04808 185 aa12.45□□□□□ -0.42
PTPRK-208ENST00000392449 NQO2P16083 231 aa12.45□□□□□ -0.42
PTPRK-208ENST00000392449 HERV-K104P61576 105 aa12.45□□□□□ -0.42
PTPRK-208ENST00000392449 POU2AF1Q16633 256 aa12.45□□□□□ -0.42
PTPRK-208ENST00000392449 KLK9Q2XQG4 91 aa12.45□□□□□ -0.42
PTPRK-208ENST00000392449 BTNL8Q6UX41 500 aa12.45□□□□□ -0.42
PTPRK-208ENST00000392449 UXS1Q8NBZ7 420 aa12.45□□□□□ -0.42
PTPRK-208ENST00000392449 TECRQ9NZ01 308 aaKnown RBP12.45□□□□□ -0.42
PTPRK-208ENST00000392449 KLK9Q9UKQ9 250 aa12.45□□□□□ -0.42
PTPRK-208ENST00000392449 A8MWP6 167 aa12.44□□□□□ -0.42
PTPRK-208ENST00000392449 HIST1H1BP16401 226 aaKnown RBP12.44□□□□□ -0.42
PTPRK-208ENST00000392449 CBX5P45973 191 aa12.44□□□□□ -0.42
PTPRK-208ENST00000392449 TAS2R20P59543 309 aa12.44□□□□□ -0.42
PTPRK-208ENST00000392449 UBE2NLQ5JXB2 153 aa12.44□□□□□ -0.42
PTPRK-208ENST00000392449 SAMD12Q8N8I0 201 aa12.44□□□□□ -0.42
PTPRK-208ENST00000392449 ZNF502Q8TBZ5 544 aa12.44□□□□□ -0.42
PTPRK-208ENST00000392449 ZNF2Q9BSG1 426 aaPredicted RBP12.44□□□□□ -0.42
PTPRK-208ENST00000392449 COMMD5Q9GZQ3 224 aa12.44□□□□□ -0.42
PTPRK-208ENST00000392449 NSG2Q9Y328 171 aa12.44□□□□□ -0.42
PTPRK-208ENST00000392449 EPPK1P58107 5090 aaKnown RBP12.43□□□□□ -0.42
PTPRK-208ENST00000392449 TRBV7-1A0A0A6YYK4 115 aa12.43□□□□□ -0.42
PTPRK-208ENST00000392449 IGHV3-21A0A0B4J1V1 117 aa12.43□□□□□ -0.42
PTPRK-208ENST00000392449 WT1-ASQ06250 92 aa12.43□□□□□ -0.42
PTPRK-208ENST00000392449 FAM106AQ4KMX7 169 aa12.43□□□□□ -0.42
PTPRK-208ENST00000392449 TMEM69Q5SWH9 247 aa12.43□□□□□ -0.42
PTPRK-208ENST00000392449 ZNF57Q68EA5 555 aaPredicted RBP12.43□□□□□ -0.42
PTPRK-208ENST00000392449 YIPF6Q96EC8 236 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms