RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 MAP1LC3AQ9H492 121 aa2.22□□□□□ -2.05
TRAV41-201ENST00000390468 EGLN3Q9H6Z9 239 aa2.22□□□□□ -2.05
TRAV41-201ENST00000390468 HES4Q9HCC6 221 aa2.22□□□□□ -2.05
TRAV41-201ENST00000390468 NPVFQ9HCQ7 196 aa2.22□□□□□ -2.05
TRAV41-201ENST00000390468 RAB9BQ9NP90 201 aa2.22□□□□□ -2.05
TRAV41-201ENST00000390468 SERTAD4Q9NUC0 356 aa2.22□□□□□ -2.05
TRAV41-201ENST00000390468 NECAP2Q9NVZ3 263 aa2.22□□□□□ -2.05
TRAV41-201ENST00000390468 MED29Q9NX70 200 aa2.22□□□□□ -2.05
TRAV41-201ENST00000390468 EHFQ9NZC4 300 aa2.22□□□□□ -2.05
TRAV41-201ENST00000390468 IL36GQ9NZH8 169 aa2.22□□□□□ -2.05
TRAV41-201ENST00000390468 GNG13Q9P2W3 67 aa2.22□□□□□ -2.05
TRAV41-201ENST00000390468 ONECUT1Q9UBC0 465 aa2.22□□□□□ -2.05
TRAV41-201ENST00000390468 VSIG4Q9Y279 399 aa2.22□□□□□ -2.05
TRAV41-201ENST00000390468 B3GALT5Q9Y2C3 310 aa2.22□□□□□ -2.05
TRAV41-201ENST00000390468 ZNF257Q9Y2Q1 563 aa2.22□□□□□ -2.05
TRAV41-201ENST00000390468 MED31Q9Y3C7 131 aa2.22□□□□□ -2.05
TRAV41-201ENST00000390468 PTRH2Q9Y3E5 179 aaKnown RBP2.22□□□□□ -2.05
TRAV41-201ENST00000390468 RNF115Q9Y4L5 304 aa2.22□□□□□ -2.05
TRAV41-201ENST00000390468 LSM5Q9Y4Y9 91 aaKnown RBP2.22□□□□□ -2.05
TRAV41-201ENST00000390468 PXMP4Q9Y6I8 212 aa2.22□□□□□ -2.05
TRAV41-201ENST00000390468 DOCK11Q5JSL3 2073 aa2.22□□□□□ -2.05
TRAV41-201ENST00000390468 GPR179Q6PRD1 2367 aa2.22□□□□□ -2.05
TRAV41-201ENST00000390468 PTPRZ1P23471 2315 aaPredicted RBP2.22□□□□□ -2.05
TRAV41-201ENST00000390468 WDR87Q6ZQQ6 2873 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 RTTNQ86VV8 2226 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 SAA2-SAA4A0A096LPE2 208 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 IGHV1-45A0A0A0MS14 117 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 TRAV8-6A0A0B4J262 113 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 MUC21A0A0G2JKD1 596 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 A0A0G2JLM5 398 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 CENPVL1A0A0U1RR11 272 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 CENPVL3A0A0U1RRI6 287 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 MUC21A0A140T8X8 626 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 SPAARA0A1B0GVQ0 90 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 A0A1W2PPK0 400 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 A0A1W2PQD3 144 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 OOEPA6NGQ2 149 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 ZFP92A6NM28 416 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 TMEM212A6NML5 194 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 C21orf140B9A014 251 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 TMEM262E9PQX1 116 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 F5H5K5 113 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 J3QRE1 110 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 RER1O15258 196 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 ST8SIA3O43173 380 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 PHF1O43189 567 aaPredicted RBP2.21□□□□□ -2.06
TRAV41-201ENST00000390468 DHHO43323 396 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 DNPH1O43598 174 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 SYNGR1O43759 233 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 ZNF324O75467 553 aaPredicted RBP2.21□□□□□ -2.06
TRAV41-201ENST00000390468 ZFAND5O76080 213 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 MPZL1O95297 269 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 NUDT14O95848 222 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 EPPINO95925 133 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 IGKV1D-16P01601 117 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 IGHG4P01861 327 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 HLA-DQA2P01906 255 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 IGKV3-11P04433 115 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 AMY1AP04745 511 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 HPNP05981 417 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 NGFRP08138 427 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 MRPL3P09001 348 aaKnown RBP2.21□□□□□ -2.06
TRAV41-201ENST00000390468 LINC00869P0C866 280 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 COX6A1P12074 109 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 MMP9P14780 707 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 GYPEP15421 78 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 ADRA2CP18825 462 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 NTF3P20783 257 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 MDKP21741 143 aaPredicted RBP2.21□□□□□ -2.06
TRAV41-201ENST00000390468 GPR183P32249 361 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 ZNF93P35789 620 aaPredicted RBP2.21□□□□□ -2.06
TRAV41-201ENST00000390468 APOBEC1P41238 236 aaKnown RBP2.21□□□□□ -2.06
TRAV41-201ENST00000390468 NBL1P41271 181 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 MEOX1P50221 254 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 LHX2P50458 406 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 EMP1P54849 157 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 CLDN6P56747 220 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 TMPRSS3P57727 454 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 CLRN1P58418 232 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 CTXN1P60606 82 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 YPEL3P61236 119 aaPredicted RBP2.21□□□□□ -2.06
TRAV41-201ENST00000390468 RPS18P62269 152 aaKnown RBP2.21□□□□□ -2.06
TRAV41-201ENST00000390468 ZNF85Q03923 595 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 MFAP5Q13361 173 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 PCOLCEQ15113 449 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 OR1Q1Q15612 314 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 ZNF141Q15928 474 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 RPEL1Q2QD12 228 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 HLA-DRB5Q30154 266 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 ACSF3Q4G176 576 aaPredicted RBP2.21□□□□□ -2.06
TRAV41-201ENST00000390468 TTC32Q5I0X7 151 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 TIMM23BQ5SRD1 257 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 MUC21Q5SSG8 566 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 GLYATL3Q5SZD4 288 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 ABHD17BQ5VST6 288 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 FAM69BQ5VUD6 431 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 FAM90A2PQ658T7 463 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 LCN10Q6JVE6 187 aa2.21□□□□□ -2.06
TRAV41-201ENST00000390468 RNASEKQ6P5S7 137 aaKnown RBP2.21□□□□□ -2.06
TRAV41-201ENST00000390468 GLIPR1L1Q6UWM5 242 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms