RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 LINC00337Q8N6G1 96 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 NUP35Q8NFH5 326 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 OR4E2Q8NGC2 313 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 OR8B12Q8NGG6 310 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 OR13C8Q8NGS7 320 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 OR10J6PQ8NGY7 276 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 OR8S1Q8NH09 359 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 TERB2Q8NHR7 220 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 ZNF420Q8TAQ5 688 aaPredicted RBP1.24□□□□□ -2.21
TRAV40-201ENST00000390467 ZNF418Q8TF45 676 aaPredicted RBP1.24□□□□□ -2.21
TRAV40-201ENST00000390467 CT55Q8WUE5 264 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 MBD3L1Q8WWY6 194 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 KLK6Q92876 244 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 HIST1H2BAQ96A08 127 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 MALSU1Q96EH3 234 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 ADAT3Q96EY9 351 aaPredicted RBP1.24□□□□□ -2.21
TRAV40-201ENST00000390467 GALNT14Q96FL9 552 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 SLC25A44Q96H78 314 aaPredicted RBP1.24□□□□□ -2.21
TRAV40-201ENST00000390467 SPACA5Q96QH8 159 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 OR2M4Q96R27 311 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 ZNF649Q9BS31 505 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 TMEM70Q9BUB7 260 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 PBDC1Q9BVG4 233 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 SMIM3Q9BZL3 60 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 NKX6-2Q9C056 277 aaPredicted RBP1.24□□□□□ -2.21
TRAV40-201ENST00000390467 OR2H1Q9GZK4 316 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 PBOV1Q9GZY1 135 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 LPAR5Q9H1C0 372 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 CST9LQ9H4G1 147 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 PRTFDC1Q9NRG1 225 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 HEBP1Q9NRV9 189 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 RBFOX1Q9NWB1 397 aaKnown RBP1.24□□□□□ -2.21
TRAV40-201ENST00000390467 MRPL16Q9NX20 251 aaKnown RBP1.24□□□□□ -2.21
TRAV40-201ENST00000390467 MED11Q9P086 117 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 RBM12B-AS1Q9P1G2 102 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 TRAPPC2LQ9UL33 140 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 HIGD1AQ9Y241 93 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 HS3ST2Q9Y278 367 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 SIGLEC7Q9Y286 467 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 CHD2O14647 1828 aaKnown RBP1.24□□□□□ -2.21
TRAV40-201ENST00000390467 GRIN2BQ13224 1484 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 SSH2Q76I76 1423 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 MIA2Q96PC5 1412 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 NALCNQ8IZF0 1738 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 TONSLQ96HA7 1378 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 ROBO3Q96MS0 1386 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 TRAV30A0A087WSZ9 112 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 TRAV38-1A0A0B4J264 116 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 LOC100130705A0A1B0GUX0 176 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 LOC102725191A0A1B0GVB3 256 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 PGPA6NDG6 321 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 RIIAD1A6NNX1 92 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 KNCNA6PVL3 124 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 A8MWP6 167 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 LEUTXA8MZ59 168 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 H3BP45 60 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 M0R2Z0 102 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 AIPO00170 330 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 SCO1O75880 301 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 KCNK2O95069 426 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 GABARAPO95166 117 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 OR2H2O95918 312 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 HLA-DRB1P01911 266 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 SCTP09683 121 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 CECR9P0C854 216 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 RAB3BP20337 219 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 CMPK1P30085 196 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 PSMB2P49721 201 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 ZNF140P52738 457 aaPredicted RBP1.23□□□□□ -2.21
TRAV40-201ENST00000390467 SLC18A1P54219 525 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 DEFA1P59665 94 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 NCS1P62166 190 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 RPS23P62266 143 aaKnown RBP1.23□□□□□ -2.21
TRAV40-201ENST00000390467 SNRPD2P62316 118 aaKnown RBP1.23□□□□□ -2.21
TRAV40-201ENST00000390467 RPS25P62851 125 aaKnown RBP1.23□□□□□ -2.21
TRAV40-201ENST00000390467 FABP5Q01469 135 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 TMEM267Q0VDI3 215 aaPredicted RBP1.23□□□□□ -2.21
TRAV40-201ENST00000390467 BTN1A1Q13410 526 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 FAM78AQ5JUQ0 283 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 GLYATL3Q5SZD4 288 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 NCMAPQ5T1S8 102 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 FAM222AQ5U5X8 452 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 ANKRD22Q5VYY1 191 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 GLYATQ6IB77 296 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 PRSS54Q6PEW0 395 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 SBSNQ6UWP8 590 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 HRCT1Q6UXD1 115 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 ZNF493Q6ZR52 646 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 TCF23Q7RTU1 214 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 VN1R4Q7Z5H5 301 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 SGPP2Q8IWX5 399 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 CTAGE3PQ8IX95 158 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 SLC25A45Q8N413 288 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 C9orf62Q8N4C0 152 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 ANKRD29Q8N6D5 301 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 TCTEX1D1Q8N7M0 179 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 ZIC4Q8N9L1 334 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 LY6G5BQ8NDX9 201 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 OR51T1Q8NGJ9 327 aa1.23□□□□□ -2.21
TRAV40-201ENST00000390467 OR5K1Q8NHB7 308 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms