RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 STPG3Q8N7X2 389 aa12.22□□□□□ -0.45
PSME4-201ENST00000389993 FOXA2Q9Y261 457 aaPredicted RBP12.22□□□□□ -0.45
PSME4-201ENST00000389993 FAM90A10PA6NDY2 464 aa12.22□□□□□ -0.45
PSME4-201ENST00000389993 FAM90A18PA6NE21 464 aa12.22□□□□□ -0.45
PSME4-201ENST00000389993 FAM90A16PA6NEW6 464 aa12.22□□□□□ -0.45
PSME4-201ENST00000389993 FAM90A20PA6NIJ5 464 aa12.22□□□□□ -0.45
PSME4-201ENST00000389993 FAM90A8PA6NJQ4 464 aa12.22□□□□□ -0.45
PSME4-201ENST00000389993 FAM90A7PA6NKC0 464 aa12.22□□□□□ -0.45
PSME4-201ENST00000389993 FAM90A22PA8MWA6 464 aa12.22□□□□□ -0.45
PSME4-201ENST00000389993 FAM90A12PA8MX19 464 aa12.22□□□□□ -0.45
PSME4-201ENST00000389993 FAM90A5PA8MXJ8 464 aa12.22□□□□□ -0.45
PSME4-201ENST00000389993 FAM90A23PA8MXZ1 464 aa12.22□□□□□ -0.45
PSME4-201ENST00000389993 FAM90A15PP0C7V4 464 aa12.22□□□□□ -0.45
PSME4-201ENST00000389993 FAM90A13PP0C7W8 464 aa12.22□□□□□ -0.45
PSME4-201ENST00000389993 FAM90A14PP0C7W9 464 aa12.22□□□□□ -0.45
PSME4-201ENST00000389993 FAM90A24PP0C7X0 464 aa12.22□□□□□ -0.45
PSME4-201ENST00000389993 VOPP1Q96AW1 172 aa12.22□□□□□ -0.45
PSME4-201ENST00000389993 ZNRD1Q9P1U0 126 aa12.22□□□□□ -0.45
PSME4-201ENST00000389993 INTS1Q8N201 2190 aaKnown RBP12.22□□□□□ -0.45
PSME4-201ENST00000389993 PDLIM4P50479 330 aa12.22□□□□□ -0.45
PSME4-201ENST00000389993 HS3ST6Q96QI5 342 aa12.22□□□□□ -0.45
PSME4-201ENST00000389993 ZNF729A6NN14 1252 aaPredicted RBP12.22□□□□□ -0.45
PSME4-201ENST00000389993 PDE6DO43924 150 aa12.22□□□□□ -0.45
PSME4-201ENST00000389993 MC5RP33032 325 aa12.22□□□□□ -0.45
PSME4-201ENST00000389993 HOXB1P14653 301 aaPredicted RBP12.21□□□□□ -0.45
PSME4-201ENST00000389993 HOXA6P31267 233 aa12.21□□□□□ -0.45
PSME4-201ENST00000389993 OTX1P32242 354 aaPredicted RBP12.21□□□□□ -0.45
PSME4-201ENST00000389993 SRSF3P84103 164 aaKnown RBP12.21□□□□□ -0.45
PSME4-201ENST00000389993 LAMTOR1Q6IAA8 161 aa12.21□□□□□ -0.45
PSME4-201ENST00000389993 PCSK4Q6UW60 755 aa12.21□□□□□ -0.45
PSME4-201ENST00000389993 WFDC12Q8WWY7 111 aa12.21□□□□□ -0.45
PSME4-201ENST00000389993 AQP10Q96PS8 301 aa12.21□□□□□ -0.45
PSME4-201ENST00000389993 IGLV3-32A0A0A0MS00 114 aa12.21□□□□□ -0.45
PSME4-201ENST00000389993 PGA5P0DJD9 388 aa12.21□□□□□ -0.45
PSME4-201ENST00000389993 MYOD1P15172 320 aa12.21□□□□□ -0.45
PSME4-201ENST00000389993 HLA-DRB5Q30154 266 aa12.21□□□□□ -0.45
PSME4-201ENST00000389993 C2orf16Q68DN1 1984 aa12.21□□□□□ -0.45
PSME4-201ENST00000389993 CACNA1BQ00975 2339 aa12.21□□□□□ -0.45
PSME4-201ENST00000389993 H1FOOQ8IZA3 346 aaPredicted RBP12.21□□□□□ -0.45
PSME4-201ENST00000389993 PNRC2Q9NPJ4 139 aaKnown RBP12.21□□□□□ -0.45
PSME4-201ENST00000389993 MFAP2P55001 183 aa12.21□□□□□ -0.46
PSME4-201ENST00000389993 ZNF385CQ66K41 422 aaPredicted RBP12.21□□□□□ -0.46
PSME4-201ENST00000389993 MFSD2BA6NFX1 497 aa12.21□□□□□ -0.46
PSME4-201ENST00000389993 IGHV1-46P01743 117 aa12.21□□□□□ -0.46
PSME4-201ENST00000389993 IL4P05112 153 aa12.21□□□□□ -0.46
PSME4-201ENST00000389993 CLDN16Q9Y5I7 305 aa12.21□□□□□ -0.46
PSME4-201ENST00000389993 PRSS1P07477 247 aa12.2□□□□□ -0.46
PSME4-201ENST00000389993 RPL30P62888 115 aaKnown RBP12.2□□□□□ -0.46
PSME4-201ENST00000389993 DPPA3Q6W0C5 159 aa12.2□□□□□ -0.46
PSME4-201ENST00000389993 LINC00305Q7Z4B0 112 aa12.2□□□□□ -0.46
PSME4-201ENST00000389993 TUBD1Q9UJT1 453 aa12.2□□□□□ -0.46
PSME4-201ENST00000389993 ADAMTS9Q9P2N4 1935 aa12.2□□□□□ -0.46
PSME4-201ENST00000389993 APCSP02743 223 aa12.2□□□□□ -0.46
PSME4-201ENST00000389993 B3GALT5-AS1P59052 145 aa12.2□□□□□ -0.46
PSME4-201ENST00000389993 MMD2Q8IY49 270 aa12.2□□□□□ -0.46
PSME4-201ENST00000389993 KBTBD11-OT1A0A1B0GTJ5 212 aa12.2□□□□□ -0.46
PSME4-201ENST00000389993 C1orf174Q8IYL3 243 aa12.2□□□□□ -0.46
PSME4-201ENST00000389993 TM4SF20Q53R12 229 aa12.2□□□□□ -0.46
PSME4-201ENST00000389993 CENPVQ7Z7K6 275 aaPredicted RBP12.2□□□□□ -0.46
PSME4-201ENST00000389993 PCNX1Q96RV3 2341 aa12.2□□□□□ -0.46
PSME4-201ENST00000389993 CGAP01215 116 aa12.2□□□□□ -0.46
PSME4-201ENST00000389993 CSRP1P21291 193 aaKnown RBP12.2□□□□□ -0.46
PSME4-201ENST00000389993 CRYGSP22914 178 aa12.2□□□□□ -0.46
PSME4-201ENST00000389993 FAM209AQ5JX71 171 aa12.2□□□□□ -0.46
PSME4-201ENST00000389993 KBTBD11O94819 623 aa12.19□□□□□ -0.46
PSME4-201ENST00000389993 TGFAP01135 160 aa12.19□□□□□ -0.46
PSME4-201ENST00000389993 SPANXN1Q5VSR9 72 aa12.19□□□□□ -0.46
PSME4-201ENST00000389993 MAPK1IP1LQ8NDC0 245 aa12.19□□□□□ -0.46
PSME4-201ENST00000389993 OR10W1Q8NGF6 305 aa12.19□□□□□ -0.46
PSME4-201ENST00000389993 FAM168AQ92567 244 aa12.19□□□□□ -0.46
PSME4-201ENST00000389993 NABP2Q9BQ15 211 aa12.19□□□□□ -0.46
PSME4-201ENST00000389993 ZNF430Q9H8G1 570 aaPredicted RBP12.19□□□□□ -0.46
PSME4-201ENST00000389993 BMI1P35226 326 aa12.19□□□□□ -0.46
PSME4-201ENST00000389993 AP4M1O00189 453 aa12.19□□□□□ -0.46
PSME4-201ENST00000389993 PSPNO60542 156 aa12.19□□□□□ -0.46
PSME4-201ENST00000389993 VN1R17PQ8TDU5 208 aa12.19□□□□□ -0.46
PSME4-201ENST00000389993 C7orf69Q9H7B7 122 aa12.19□□□□□ -0.46
PSME4-201ENST00000389993 FHL1Q13642 323 aa12.19□□□□□ -0.46
PSME4-201ENST00000389993 HIST3H3Q16695 136 aa12.19□□□□□ -0.46
PSME4-201ENST00000389993 DHRS11Q6UWP2 260 aa12.19□□□□□ -0.46
PSME4-201ENST00000389993 RPRMQ9NS64 109 aa12.19□□□□□ -0.46
PSME4-201ENST00000389993 PKDREJQ9NTG1 2253 aa12.19□□□□□ -0.46
PSME4-201ENST00000389993 ZNF735P0CB33 412 aa12.19□□□□□ -0.46
PSME4-201ENST00000389993 NHLRC3Q5JS37 347 aa12.19□□□□□ -0.46
PSME4-201ENST00000389993 C1QTNF12Q5T7M4 302 aa12.19□□□□□ -0.46
PSME4-201ENST00000389993 GATAD1Q8WUU5 269 aa12.19□□□□□ -0.46
PSME4-201ENST00000389993 SPTBN1Q01082 2364 aaKnown RBP12.18□□□□□ -0.46
PSME4-201ENST00000389993 ANAPC16Q96DE5 110 aa12.18□□□□□ -0.46
PSME4-201ENST00000389993 DNAJC4Q9NNZ3 241 aa12.18□□□□□ -0.46
PSME4-201ENST00000389993 SRD5A1P18405 259 aa12.18□□□□□ -0.46
PSME4-201ENST00000389993 HNRNPA3P51991 378 aaKnown RBP12.18□□□□□ -0.46
PSME4-201ENST00000389993 GOLT1AQ6ZVE7 132 aa12.18□□□□□ -0.46
PSME4-201ENST00000389993 PACRGQ96M98 296 aaPredicted RBP12.18□□□□□ -0.46
PSME4-201ENST00000389993 MRPS18CQ9Y3D5 142 aaKnown RBP12.18□□□□□ -0.46
PSME4-201ENST00000389993 PAM16Q9Y3D7 125 aa12.18□□□□□ -0.46
PSME4-201ENST00000389993 CBY3A6NI87 242 aa12.18□□□□□ -0.46
PSME4-201ENST00000389993 MEF2BQ02080 365 aaPredicted RBP12.18□□□□□ -0.46
PSME4-201ENST00000389993 IBA57Q5T440 356 aaKnown RBP12.18□□□□□ -0.46
PSME4-201ENST00000389993 METTL26Q96S19 204 aa12.18□□□□□ -0.46
PSME4-201ENST00000389993 GRIFINA4D1Z8 144 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms