RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 FAM181BA6NEQ2 426 aa12.22□□□□□ -0.45
VPS9D1-201ENST00000389386 NUDT3O95989 172 aa12.22□□□□□ -0.45
VPS9D1-201ENST00000389386 CXorf1O96002 111 aa12.22□□□□□ -0.45
VPS9D1-201ENST00000389386 LINC00869P0C866 280 aa12.22□□□□□ -0.45
VPS9D1-201ENST00000389386 SLC35B1P78383 322 aa12.22□□□□□ -0.45
VPS9D1-201ENST00000389386 C11orf52Q96A22 123 aa12.22□□□□□ -0.45
VPS9D1-201ENST00000389386 OR2D2Q9H210 308 aa12.22□□□□□ -0.45
VPS9D1-201ENST00000389386 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.22□□□□□ -0.45
VPS9D1-201ENST00000389386 FRYQ5TBA9 3013 aa12.22□□□□□ -0.45
VPS9D1-201ENST00000389386 ESPL1Q14674 2120 aa12.22□□□□□ -0.45
VPS9D1-201ENST00000389386 PTPRZ1P23471 2315 aaPredicted RBP12.22□□□□□ -0.45
VPS9D1-201ENST00000389386 TRGV10A0A0A0MS01 117 aa12.22□□□□□ -0.45
VPS9D1-201ENST00000389386 RAMP3O60896 148 aa12.22□□□□□ -0.45
VPS9D1-201ENST00000389386 OR10J4P0C629 311 aa12.22□□□□□ -0.45
VPS9D1-201ENST00000389386 PSG9Q00887 426 aa12.22□□□□□ -0.45
VPS9D1-201ENST00000389386 DRAM1Q8N682 238 aa12.22□□□□□ -0.45
VPS9D1-201ENST00000389386 C18orf32Q8TCD1 76 aa12.22□□□□□ -0.45
VPS9D1-201ENST00000389386 C19orf25Q9UFG5 118 aaPredicted RBP12.22□□□□□ -0.45
VPS9D1-201ENST00000389386 TRAV24A0A0B4J272 114 aa12.21□□□□□ -0.45
VPS9D1-201ENST00000389386 PCNX2A6NKB5 2137 aa12.21□□□□□ -0.45
VPS9D1-201ENST00000389386 HLA-DQA1P01909 254 aa12.21□□□□□ -0.45
VPS9D1-201ENST00000389386 AMY1AP04745 511 aa12.21□□□□□ -0.45
VPS9D1-201ENST00000389386 G6PCP35575 357 aa12.21□□□□□ -0.45
VPS9D1-201ENST00000389386 GPM6AP51674 278 aa12.21□□□□□ -0.45
VPS9D1-201ENST00000389386 TNXAQ16473 311 aa12.21□□□□□ -0.45
VPS9D1-201ENST00000389386 MRPL14Q6P1L8 145 aaKnown RBP12.21□□□□□ -0.45
VPS9D1-201ENST00000389386 SPSB4Q96A44 273 aa12.21□□□□□ -0.45
VPS9D1-201ENST00000389386 TRAPPC2LH3BP13 241 aa12.21□□□□□ -0.46
VPS9D1-201ENST00000389386 SAP30O75446 220 aa12.21□□□□□ -0.46
VPS9D1-201ENST00000389386 CELA3BP08861 270 aa12.21□□□□□ -0.46
VPS9D1-201ENST00000389386 ARF6P62330 175 aa12.21□□□□□ -0.46
VPS9D1-201ENST00000389386 ST6GALNAC6Q969X2 333 aa12.21□□□□□ -0.46
VPS9D1-201ENST00000389386 SPACA9Q96E40 222 aaPredicted RBP12.21□□□□□ -0.46
VPS9D1-201ENST00000389386 DEPPQ9NTK1 212 aa12.21□□□□□ -0.46
VPS9D1-201ENST00000389386 TMEM38BQ9NVV0 291 aa12.21□□□□□ -0.46
VPS9D1-201ENST00000389386 CRIM1Q9NZV1 1036 aa12.21□□□□□ -0.46
VPS9D1-201ENST00000389386 MUC21A0A0G2JKD1 596 aa12.2□□□□□ -0.46
VPS9D1-201ENST00000389386 MUC21A0A140T8X8 626 aa12.2□□□□□ -0.46
VPS9D1-201ENST00000389386 C2orf70A6NJV1 201 aa12.2□□□□□ -0.46
VPS9D1-201ENST00000389386 J3QR06 171 aa12.2□□□□□ -0.46
VPS9D1-201ENST00000389386 CLDN14O95500 239 aa12.2□□□□□ -0.46
VPS9D1-201ENST00000389386 APCSP02743 223 aa12.2□□□□□ -0.46
VPS9D1-201ENST00000389386 ARR3P36575 388 aa12.2□□□□□ -0.46
VPS9D1-201ENST00000389386 UBE2G1P62253 170 aa12.2□□□□□ -0.46
VPS9D1-201ENST00000389386 MUC21Q5SSG8 566 aa12.2□□□□□ -0.46
VPS9D1-201ENST00000389386 VWA1Q6PCB0 445 aa12.2□□□□□ -0.46
VPS9D1-201ENST00000389386 PRSS57Q6UWY2 283 aa12.2□□□□□ -0.46
VPS9D1-201ENST00000389386 SPATA12Q7Z6I5 190 aa12.2□□□□□ -0.46
VPS9D1-201ENST00000389386 WFDC8Q8IUA0 241 aa12.2□□□□□ -0.46
VPS9D1-201ENST00000389386 MKXQ8IYA7 352 aa12.2□□□□□ -0.46
VPS9D1-201ENST00000389386 FADS6Q8N9I5 356 aa12.2□□□□□ -0.46
VPS9D1-201ENST00000389386 FGFBP3Q8TAT2 258 aa12.2□□□□□ -0.46
VPS9D1-201ENST00000389386 SARAFQ96BY9 339 aa12.2□□□□□ -0.46
VPS9D1-201ENST00000389386 B4GALT1P15291 398 aa12.2□□□□□ -0.46
VPS9D1-201ENST00000389386 CD1BP29016 333 aa12.2□□□□□ -0.46
VPS9D1-201ENST00000389386 PCOLCEQ15113 449 aa12.2□□□□□ -0.46
VPS9D1-201ENST00000389386 OR2H1Q9GZK4 316 aa12.2□□□□□ -0.46
VPS9D1-201ENST00000389386 C22orf46C9J442 243 aa12.19□□□□□ -0.46
VPS9D1-201ENST00000389386 TCL1AP56279 114 aa12.19□□□□□ -0.46
VPS9D1-201ENST00000389386 MRPL54Q6P161 138 aaKnown RBP12.19□□□□□ -0.46
VPS9D1-201ENST00000389386 SYNGR1O43759 233 aa12.19□□□□□ -0.46
VPS9D1-201ENST00000389386 CCL3P10147 92 aa12.19□□□□□ -0.46
VPS9D1-201ENST00000389386 RNASE7Q9H1E1 156 aaKnown RBP12.19□□□□□ -0.46
VPS9D1-201ENST00000389386 ST20Q9HBF5 79 aa12.19□□□□□ -0.46
VPS9D1-201ENST00000389386 CHCHD2Q9Y6H1 151 aaPredicted RBP12.19□□□□□ -0.46
VPS9D1-201ENST00000389386 SPTBN2O15020 2390 aa12.19□□□□□ -0.46
VPS9D1-201ENST00000389386 ZNF292O60281 2723 aa12.19□□□□□ -0.46
VPS9D1-201ENST00000389386 TRAV8-6A0A0B4J262 113 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 C15orf62A8K5M9 175 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 IGLC1P0CG04 106 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 GCHFRP30047 84 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 OPRK1P41145 380 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 SMIM21Q3B7S5 101 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 SPINK9Q5DT21 86 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 LOC400499M0QZD8 3231 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 USF3Q68DE3 2245 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 M0R1X1 148 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 M0R2Z0 102 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 CD5LO43866 347 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 HSBP1O75506 76 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 KLF7O75840 302 aaPredicted RBP12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 GATA2P23769 480 aaPredicted RBP12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 NPY1RP25929 384 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 NTF4P34130 210 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 SSTR5P35346 364 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 CA7P43166 264 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 FXYD3Q14802 87 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 SPATA46Q5T0L3 261 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 KIR3DL3Q8N743 410 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 UBALD1Q8TB05 177 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 ZNF488Q96MN9 340 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 OSTCQ9NRP0 149 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 DLL3Q9NYJ7 618 aa12.18□□□□□ -0.46
VPS9D1-201ENST00000389386 CDX4O14627 284 aaPredicted RBP12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 OTX2P32243 289 aa12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 ARF1P84077 181 aaKnown RBP12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 SLAQ13239 276 aa12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 CEACAM21Q3KPI0 293 aa12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 C12orf54Q6X4T0 127 aa12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 C1QTNF5Q9BXJ0 243 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms