RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 SDC2P34741 201 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 WNT4P56705 351 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 CACNG7P62955 275 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 TAB1Q15750 504 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 ECSCRQ19T08 205 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 TMEM255AQ5JRV8 349 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 FAM162BQ5T6X4 162 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 SHISA6Q6ZSJ9 500 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 FOXL2NBQ6ZUU3 175 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 LRRC28Q86X40 367 aaPredicted RBP4.49□□□□□ -1.69
ERCC4-202ENST00000389138 LINC00471Q8N535 108 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 ZNF439Q8NDP4 499 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 OR51A2Q8NGJ7 313 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 OR2K2Q8NGT1 345 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 OR4S2Q8NH73 311 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 ZNRF2Q8NHG8 242 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 IL22RA2Q969J5 263 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 GALMQ96C23 342 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 TXNL4BQ9NX01 149 aaKnown RBP4.49□□□□□ -1.69
ERCC4-202ENST00000389138 DHCR7Q9UBM7 475 aaKnown RBP4.49□□□□□ -1.69
ERCC4-202ENST00000389138 SSR3Q9UNL2 185 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 RBM7Q9Y580 266 aaKnown RBP4.49□□□□□ -1.69
ERCC4-202ENST00000389138 NIPBLQ6KC79 2804 aaeCLIP4.49□□□□□ -1.69
ERCC4-202ENST00000389138 ESPL1Q14674 2120 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 A0A1B0GWA3 101 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 FAM25AB3EWG3 89 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 FAM25CB3EWG5 89 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 FAM25GB3EWG6 89 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 EEF1E1-BLOC1S5C9J1V9 151 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 TRAPPC2LH3BP13 241 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 EEF1E1O43324 174 aaKnown RBP4.49□□□□□ -1.69
ERCC4-202ENST00000389138 RENP00797 406 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 FCGR3AP08637 254 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 CD79AP11912 226 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 PFN2P35080 140 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 RPL35P42766 123 aaKnown RBP4.49□□□□□ -1.69
ERCC4-202ENST00000389138 KIR2DS2P43631 304 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 AMTP48728 403 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 DEFA1P59665 94 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 ERVFC1-1P60608 527 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 HSPE1P61604 102 aaKnown RBP4.49□□□□□ -1.69
ERCC4-202ENST00000389138 FABP5Q01469 135 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 PMAIP1Q13794 54 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 TIMM50Q3ZCQ8 353 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 TEX36Q5VZQ5 186 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 TOMM20LQ6UXN7 152 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 C1QL2Q7Z5L3 287 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 CNTRLQ7Z7A1 2325 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 TGIF2LYQ8IUE0 185 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 RFLNBQ8N5W9 214 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 ZNF441Q8N8Z8 693 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 ZNF114Q8NC26 417 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 ZNF485Q8NCK3 441 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 OR10G4Q8NGN3 311 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 MFSD8Q8NHS3 518 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 SECTM1Q8WVN6 248 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 ZNF71Q9NQZ8 489 aaPredicted RBP4.49□□□□□ -1.69
ERCC4-202ENST00000389138 PRTFDC1Q9NRG1 225 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 PRNDQ9UKY0 176 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 SVILO95425 2214 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 PCNX3Q9H6A9 2034 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 TRAV8-4A0A0B4J246 113 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 INAFM1C9JVW0 142 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 ZNF670-ZNF695F2Z2N8 137 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 SLC17A2O00624 439 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 TSHBP01222 138 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 P01737 135 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 MUC1P15941 1255 aaPredicted RBP4.48□□□□□ -1.69
ERCC4-202ENST00000389138 RPS4Y1P22090 263 aaKnown RBP4.48□□□□□ -1.69
ERCC4-202ENST00000389138 MFAP2P55001 183 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 ELOCQ15369 112 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 ATAD3CQ5T2N8 411 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 C6orf223Q8N319 242 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 NEIL3Q8TAT5 605 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 TSLPQ969D9 159 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 OR8D2Q9GZM6 311 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 KCNIP1Q9NZI2 227 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 COPZ2Q9P299 210 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 SPRR3Q9UBC9 169 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 COMMD3Q9UBI1 195 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 MED31Q9Y3C7 131 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 TACC2O95359 2948 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 TNRC6AQ8NDV7 1962 aaKnown RBP4.48□□□□□ -1.69
ERCC4-202ENST00000389138 FCGR2CP31995 323 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 RBP2P50120 134 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 KLF17Q5JT82 389 aaPredicted RBP4.48□□□□□ -1.69
ERCC4-202ENST00000389138 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.48□□□□□ -1.69
ERCC4-202ENST00000389138 GSG1LQ6UXU4 331 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 GKN2Q86XP6 184 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 OR1N2Q8NGR9 330 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 OR4K13Q8NH42 304 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 TMED6Q8WW62 240 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 CHCHD10Q8WYQ3 142 aaPredicted RBP4.48□□□□□ -1.69
ERCC4-202ENST00000389138 TMEM230Q96A57 120 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 PTX4Q96A99 478 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 ZNF486Q96H40 463 aaPredicted RBP4.48□□□□□ -1.69
ERCC4-202ENST00000389138 SPACA5Q96QH8 159 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 TBL1XR1Q9BZK7 514 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 CALYQ9NYX4 217 aa4.48□□□□□ -1.69
ERCC4-202ENST00000389138 RPS6KB2Q9UBS0 482 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms