RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 HSPE1P61604 102 aaKnown RBP21.5■■□□□ 1.03
MSX1-201ENST00000382723 RPL8P62917 257 aaKnown RBP21.5■■□□□ 1.03
MSX1-201ENST00000382723 NHLH2Q02577 135 aa21.5■■□□□ 1.03
MSX1-201ENST00000382723 CYB5R2Q6BCY4 276 aa21.5■■□□□ 1.03
MSX1-201ENST00000382723 ZNF430Q9H8G1 570 aaPredicted RBP21.5■■□□□ 1.03
MSX1-201ENST00000382723 METTL1Q9UBP6 276 aaKnown RBP21.5■■□□□ 1.03
MSX1-201ENST00000382723 F2RL1P55085 397 aa21.49■■□□□ 1.03
MSX1-201ENST00000382723 EWSR1Q01844 656 aaKnown RBP eCLIP21.49■■□□□ 1.03
MSX1-201ENST00000382723 PJVKQ0ZLH3 352 aa21.49■■□□□ 1.03
MSX1-201ENST00000382723 MMDQ15546 238 aa21.49■■□□□ 1.03
MSX1-201ENST00000382723 SPANXN5Q5MJ07 72 aa21.49■■□□□ 1.03
MSX1-201ENST00000382723 FAM120AOSQ5T036 256 aa21.49■■□□□ 1.03
MSX1-201ENST00000382723 TMEM252Q8N6L7 170 aa21.49■■□□□ 1.03
MSX1-201ENST00000382723 OR2T10Q8NGZ9 312 aa21.49■■□□□ 1.03
MSX1-201ENST00000382723 RNF5Q99942 180 aa21.49■■□□□ 1.03
MSX1-201ENST00000382723 ARPC5LQ9BPX5 153 aa21.49■■□□□ 1.03
MSX1-201ENST00000382723 SMIM3Q9BZL3 60 aa21.49■■□□□ 1.03
MSX1-201ENST00000382723 A0A0U1RQK1 487 aa21.49■■□□□ 1.03
MSX1-201ENST00000382723 RGS13O14921 159 aa21.49■■□□□ 1.03
MSX1-201ENST00000382723 TMEM267Q0VDI3 215 aaPredicted RBP21.49■■□□□ 1.03
MSX1-201ENST00000382723 TEX45Q8NA69 505 aa21.49■■□□□ 1.03
MSX1-201ENST00000382723 CLCC1Q96S66 551 aa21.49■■□□□ 1.03
MSX1-201ENST00000382723 GON7Q9BXV9 100 aa21.49■■□□□ 1.03
MSX1-201ENST00000382723 SLC25A31Q9H0C2 315 aa21.49■■□□□ 1.03
MSX1-201ENST00000382723 FKBP11Q9NYL4 201 aa21.49■■□□□ 1.03
MSX1-201ENST00000382723 SOX21Q9Y651 276 aaPredicted RBP21.49■■□□□ 1.03
MSX1-201ENST00000382723 TEX50A0A1B0GTY4 177 aa21.48■■□□□ 1.03
MSX1-201ENST00000382723 HOXA1P49639 335 aaPredicted RBP21.48■■□□□ 1.03
MSX1-201ENST00000382723 COMMD5Q9GZQ3 224 aa21.48■■□□□ 1.03
MSX1-201ENST00000382723 FBXL15Q9H469 300 aa21.48■■□□□ 1.03
MSX1-201ENST00000382723 CACFD1Q9UGQ2 172 aa21.48■■□□□ 1.03
MSX1-201ENST00000382723 CST7O76096 145 aa21.47■■□□□ 1.03
MSX1-201ENST00000382723 BRS3P32247 399 aa21.47■■□□□ 1.03
MSX1-201ENST00000382723 TAS2R30P59541 319 aa21.47■■□□□ 1.03
MSX1-201ENST00000382723 PLGLAQ15195 96 aa21.47■■□□□ 1.03
MSX1-201ENST00000382723 PDLIM3Q53GG5 364 aaPredicted RBP21.47■■□□□ 1.03
MSX1-201ENST00000382723 ITGB1BP2Q9UKP3 347 aa21.47■■□□□ 1.03
MSX1-201ENST00000382723 SIGLEC9Q9Y336 463 aa21.47■■□□□ 1.03
MSX1-201ENST00000382723 CRYGBP07316 175 aa21.47■■□□□ 1.03
MSX1-201ENST00000382723 FGF2P09038 288 aa21.47■■□□□ 1.03
MSX1-201ENST00000382723 CIB3Q96Q77 187 aaPredicted RBP21.47■■□□□ 1.03
MSX1-201ENST00000382723 ZNF471Q9BX82 626 aaPredicted RBP21.47■■□□□ 1.03
MSX1-201ENST00000382723 SLA2Q9H6Q3 261 aa21.47■■□□□ 1.03
MSX1-201ENST00000382723 HEYLQ9NQ87 328 aaPredicted RBP21.47■■□□□ 1.03
MSX1-201ENST00000382723 FBXL17Q9UF56 701 aa21.47■■□□□ 1.03
MSX1-201ENST00000382723 ZNF257Q9Y2Q1 563 aa21.47■■□□□ 1.03
MSX1-201ENST00000382723 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.47■■□□□ 1.03
MSX1-201ENST00000382723 CCDC168Q8NDH2 2452 aa21.46■■□□□ 1.03
MSX1-201ENST00000382723 MRGPRG-AS1Q2M3A8 158 aa21.46■■□□□ 1.03
MSX1-201ENST00000382723 TMEM217Q8N7C4 229 aa21.46■■□□□ 1.03
MSX1-201ENST00000382723 FAM96BQ9Y3D0 163 aa21.46■■□□□ 1.03
MSX1-201ENST00000382723 RRHO14718 337 aa21.45■■□□□ 1.02
MSX1-201ENST00000382723 NBR2O15453 112 aa21.45■■□□□ 1.02
MSX1-201ENST00000382723 FAM106CPP0CH98 169 aa21.45■■□□□ 1.02
MSX1-201ENST00000382723 TMEM11P17152 192 aa21.45■■□□□ 1.02
MSX1-201ENST00000382723 C10orf55Q5SWW7 151 aa21.45■■□□□ 1.02
MSX1-201ENST00000382723 OR8H1Q8NGG4 311 aa21.45■■□□□ 1.02
MSX1-201ENST00000382723 HIPK2Q9H2X6 1198 aa21.45■■□□□ 1.02
MSX1-201ENST00000382723 METTL15P1P0C7V9 234 aa21.45■■□□□ 1.02
MSX1-201ENST00000382723 PRSS8Q16651 343 aa21.45■■□□□ 1.02
MSX1-201ENST00000382723 PPP1R27Q86WC6 154 aa21.45■■□□□ 1.02
MSX1-201ENST00000382723 OR5B3Q8NH48 314 aa21.45■■□□□ 1.02
MSX1-201ENST00000382723 OR4C12Q96R67 309 aa21.45■■□□□ 1.02
MSX1-201ENST00000382723 ENY2Q9NPA8 101 aa21.45■■□□□ 1.02
MSX1-201ENST00000382723 KIAA1456Q9P272 454 aa21.45■■□□□ 1.02
MSX1-201ENST00000382723 CELSR1Q9NYQ6 3014 aa21.44■■□□□ 1.02
MSX1-201ENST00000382723 SPDEFO95238 335 aa21.44■■□□□ 1.02
MSX1-201ENST00000382723 VDAC2P45880 294 aaPredicted RBP21.44■■□□□ 1.02
MSX1-201ENST00000382723 GNB1P62873 340 aa21.44■■□□□ 1.02
MSX1-201ENST00000382723 PRCDQ00LT1 54 aa21.44■■□□□ 1.02
MSX1-201ENST00000382723 EBI3Q14213 229 aa21.44■■□□□ 1.02
MSX1-201ENST00000382723 STX12Q86Y82 276 aa21.44■■□□□ 1.02
MSX1-201ENST00000382723 TNXAQ16473 311 aa21.43■■□□□ 1.02
MSX1-201ENST00000382723 SLC51BQ86UW2 128 aa21.43■■□□□ 1.02
MSX1-201ENST00000382723 MMD2Q8IY49 270 aa21.43■■□□□ 1.02
MSX1-201ENST00000382723 OR1L8Q8NGR8 309 aa21.43■■□□□ 1.02
MSX1-201ENST00000382723 PLEKHA3Q9HB20 300 aa21.43■■□□□ 1.02
MSX1-201ENST00000382723 CYTL1Q9NRR1 136 aa21.43■■□□□ 1.02
MSX1-201ENST00000382723 STRAPQ9Y3F4 350 aaKnown RBP21.43■■□□□ 1.02
MSX1-201ENST00000382723 ZANQ9Y493 2812 aa21.43■■□□□ 1.02
MSX1-201ENST00000382723 NCBP2LA6PVI3 153 aaKnown RBP21.43■■□□□ 1.02
MSX1-201ENST00000382723 E7EUB6 86 aa21.43■■□□□ 1.02
MSX1-201ENST00000382723 SULT1A1P50225 295 aa21.43■■□□□ 1.02
MSX1-201ENST00000382723 Q8N6K4 173 aa21.43■■□□□ 1.02
MSX1-201ENST00000382723 NPBQ8NG41 125 aa21.43■■□□□ 1.02
MSX1-201ENST00000382723 ACTL6BO94805 426 aa21.42■■□□□ 1.02
MSX1-201ENST00000382723 CFDP00746 253 aaPredicted RBP21.42■■□□□ 1.02
MSX1-201ENST00000382723 DYNLT3P51808 116 aa21.42■■□□□ 1.02
MSX1-201ENST00000382723 CLINT1Q14677 625 aa21.42■■□□□ 1.02
MSX1-201ENST00000382723 THNSL2Q86YJ6 484 aa21.42■■□□□ 1.02
MSX1-201ENST00000382723 OR10W1Q8NGF6 305 aa21.42■■□□□ 1.02
MSX1-201ENST00000382723 ITPR3Q14573 2671 aa21.42■■□□□ 1.02
MSX1-201ENST00000382723 FCN1O00602 326 aa21.41■■□□□ 1.02
MSX1-201ENST00000382723 TAAR5O14804 337 aa21.41■■□□□ 1.02
MSX1-201ENST00000382723 IFNA10P01566 189 aa21.41■■□□□ 1.02
MSX1-201ENST00000382723 BAXQ07812 192 aa21.41■■□□□ 1.02
MSX1-201ENST00000382723 TEX261Q6UWH6 196 aa21.41■■□□□ 1.02
MSX1-201ENST00000382723 OR5C1Q8NGR4 320 aa21.41■■□□□ 1.02
MSX1-201ENST00000382723 WFDC1Q9HC57 220 aa21.41■■□□□ 1.02
MSX1-201ENST00000382723 NDUFA4L2Q9NRX3 87 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms