RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 CSRP2Q16527 193 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 ZNF260Q3ZCT1 412 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 TMEM92Q6UXU6 159 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 PPP1R27Q86WC6 154 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 SMIM20Q8N5G0 67 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 CCL17Q92583 94 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 COX14Q96I36 57 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 SLC7A10Q9NS82 523 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 NAV2Q8IVL1 2488 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.21□□□□□ -1.74
PTPRD-203ENST00000381196 A0A1W2PR48 441 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 A0A1W2PRE2 83 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 GYPBP06028 91 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 LINC00271P0C7V0 271 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 DYNLT3P51808 116 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 ATP5J2P56134 94 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 ZNF146Q15072 292 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 ZNF774Q6NX45 483 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.21□□□□□ -1.74
PTPRD-203ENST00000381196 ELOVL1Q9BW60 279 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 MRPL18Q9H0U6 180 aaKnown RBP4.21□□□□□ -1.74
PTPRD-203ENST00000381196 C5orf66Q9H5L9 145 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 RNF115Q9Y4L5 304 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 NPIPB6E9PJ23 425 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 SMAD7O15105 426 aaKnown RBP4.21□□□□□ -1.74
PTPRD-203ENST00000381196 IGFBP3P17936 291 aaPredicted RBP4.21□□□□□ -1.74
PTPRD-203ENST00000381196 CA6P23280 308 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 ID1P41134 155 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 FOXF1Q12946 379 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 MRPL23Q16540 153 aaKnown RBP4.21□□□□□ -1.74
PTPRD-203ENST00000381196 OCIAD2Q56VL3 154 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 C14orf144Q96I85 54 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 GPR27Q9NS67 375 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 IL17BQ9UHF5 180 aa4.21□□□□□ -1.74
PTPRD-203ENST00000381196 IGHV3-64DA0A0J9YX35 117 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 C16orf97H3BN30 126 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 PNLIPP16233 465 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 GZMHP20718 246 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 Q56UQ5 140 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 ZNF645Q8N7E2 425 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 C16orf52Q8NHV5 167 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 ZNF502Q8TBZ5 544 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 ORM2P19652 201 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 LILRA6Q6PI73 481 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 Q96M66 194 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 VSTM2LQ96N03 204 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 C5orf67F2Z3F1 127 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 PLPP3O14495 311 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 INAFM2P0DMQ5 153 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 HINT1P49773 126 aaPredicted RBP4.2□□□□□ -1.74
PTPRD-203ENST00000381196 MMD2Q8IY49 270 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 BCL6BQ8N143 479 aaPredicted RBP4.2□□□□□ -1.74
PTPRD-203ENST00000381196 FAM89BQ8N5H3 189 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 TAF15Q92804 592 aaKnown RBP eCLIP4.2□□□□□ -1.74
PTPRD-203ENST00000381196 TNFRSF1BP20333 461 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 COX7A1P24310 79 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 RBM11P57052 281 aaKnown RBP4.2□□□□□ -1.74
PTPRD-203ENST00000381196 TNFAIP6P98066 277 aaPredicted RBP4.2□□□□□ -1.74
PTPRD-203ENST00000381196 AESQ08117 197 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 LILRA3Q8N6C8 439 aaPredicted RBP4.2□□□□□ -1.74
PTPRD-203ENST00000381196 DYNLRB2Q8TF09 96 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 ALKBH3Q96Q83 286 aaPredicted RBP4.2□□□□□ -1.74
PTPRD-203ENST00000381196 SEPSECSQ9HD40 501 aaKnown RBP4.2□□□□□ -1.74
PTPRD-203ENST00000381196 JMJD1CQ15652 2540 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 ZNF708P17019 499 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 GPR6P46095 362 aaPredicted RBP4.2□□□□□ -1.74
PTPRD-203ENST00000381196 TMEM187Q14656 261 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 LCN15Q6UWW0 184 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 ARHGAP5-AS1Q96IT6 56 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 GPR183P32249 361 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 EMP1P54849 157 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 ASPHD2Q6ICH7 369 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 FAM231DQ6ZW35 169 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 MYOZ3Q8TDC0 251 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 VN1R1Q9GZP7 353 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 FRRS1LQ9P0K9 344 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 KLK13Q9UKR3 277 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 HS3ST3B1Q9Y662 390 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 ATG2AQ2TAZ0 1938 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 IGHV1-24A0A0C4DH33 117 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 TSPAN13O95857 204 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 DNAL4O96015 105 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 B3GALT4O96024 378 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 THBDP07204 575 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 COL9A1P20849 921 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 ZNF121P58317 390 aaPredicted RBP4.2□□□□□ -1.74
PTPRD-203ENST00000381196 NEGR1Q7Z3B1 354 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 SLC25A40Q8TBP6 338 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 GPR146Q96CH1 333 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 SRSF8Q9BRL6 282 aaKnown RBP4.2□□□□□ -1.74
PTPRD-203ENST00000381196 MED20Q9H944 212 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 CD40P25942 277 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 CEACAM16Q2WEN9 425 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 TMEM255AQ5JRV8 349 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 SPANXN5Q5MJ07 72 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 ZNF788Q6ZQV5 615 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 LINC01551Q86U37 167 aa4.2□□□□□ -1.74
PTPRD-203ENST00000381196 FASNP49327 2511 aaKnown RBP4.19□□□□□ -1.74
PTPRD-203ENST00000381196 CACNG7P62955 275 aa4.19□□□□□ -1.74
PTPRD-203ENST00000381196 PRO1933Q9H354 126 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms