RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 SLC35D1Q9NTN3 355 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 ZNF503-AS2A6NEH8 195 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 RRHO14718 337 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 IGLC2P0DOY2 106 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 IGLC3P0DOY3 106 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 PRAMEF5Q5TYX0 476 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 PRAMEF6Q5VXH4 476 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 TCTEX1D1Q8N7M0 179 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 TTTY12Q9BZ98 90 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 PLEKHA3Q9HB20 300 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 KCNIP2Q9NS61 270 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 IL36BQ9NZH7 164 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 PSG11Q9UQ72 335 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 YTHDF2Q9Y5A9 579 aaKnown RBP11.55□□□□□ -0.56
SDC1-202ENST00000381150 FCGR3BO75015 233 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 CRYABP02511 175 aaKnown RBP11.55□□□□□ -0.56
SDC1-202ENST00000381150 OR10J4P0C629 311 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 CRYBB3P26998 211 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 MAGEA5P43359 124 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 PSG7Q13046 419 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 CATR1Q13166 79 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 OR1C1Q15619 314 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 TUSC5Q8IXB3 177 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 HIPK2Q9H2X6 1198 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 TIMM9Q9Y5J7 89 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 K7EN84 100 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 YPEL1O60688 119 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 GNG4P50150 75 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 ABHD17BQ5VST6 288 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 KLHDC1Q8N7A1 406 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 LOXL4Q96JB6 756 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 YPEL2Q96QA6 119 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 WASHC3Q9Y3C0 194 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 PIGBOS1A0A0B4J2F0 54 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 RNF212BA8MTL3 300 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 OR7C2O60412 319 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 CGAP01215 116 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 GPR6P46095 362 aaPredicted RBP11.54□□□□□ -0.56
SDC1-202ENST00000381150 GNG3P63215 75 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 FBLN7Q53RD9 439 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 Q8NFD4 153 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 REPIN1Q9BWE0 567 aaKnown RBP11.54□□□□□ -0.56
SDC1-202ENST00000381150 SEPSECSQ9HD40 501 aaKnown RBP11.54□□□□□ -0.56
SDC1-202ENST00000381150 CFAP47Q6ZTR5 3102 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 ZNF83P51522 516 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 KLF3P57682 345 aaPredicted RBP11.54□□□□□ -0.56
SDC1-202ENST00000381150 TCTAP57738 103 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 C3AR1Q16581 482 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 ANKRD39Q53RE8 183 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 TMEM251Q8N6I4 163 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 SLC24A4Q8NFF2 622 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 GALMQ96C23 342 aa11.54□□□□□ -0.56
SDC1-202ENST00000381150 MCRIP2Q9BUT9 160 aaKnown RBP11.54□□□□□ -0.56
SDC1-202ENST00000381150 A0A1W2PS18 150 aa11.53□□□□□ -0.56
SDC1-202ENST00000381150 NKX6-3A6NJ46 265 aa11.53□□□□□ -0.56
SDC1-202ENST00000381150 MT-CO3P00414 261 aa11.53□□□□□ -0.56
SDC1-202ENST00000381150 COMPP49747 757 aaPredicted RBP11.53□□□□□ -0.56
SDC1-202ENST00000381150 SELENOTP62341 195 aa11.53□□□□□ -0.56
SDC1-202ENST00000381150 UBE2V1Q13404 147 aa11.53□□□□□ -0.56
SDC1-202ENST00000381150 PMCHL1Q16048 86 aa11.53□□□□□ -0.56
SDC1-202ENST00000381150 FAM122AQ96E09 287 aa11.53□□□□□ -0.56
SDC1-202ENST00000381150 HSPB7Q9UBY9 170 aa11.53□□□□□ -0.56
SDC1-202ENST00000381150 SLC45A2Q9UMX9 530 aa11.53□□□□□ -0.56
SDC1-202ENST00000381150 FAM166BA8MTA8 275 aa11.53□□□□□ -0.56
SDC1-202ENST00000381150 SS18L1O75177 396 aaPredicted RBP11.53□□□□□ -0.56
SDC1-202ENST00000381150 YPEL3P61236 119 aaPredicted RBP11.53□□□□□ -0.56
SDC1-202ENST00000381150 PSG5Q15238 335 aa11.53□□□□□ -0.56
SDC1-202ENST00000381150 OR4A16Q8NH70 328 aa11.53□□□□□ -0.56
SDC1-202ENST00000381150 FAM216AQ8WUB2 273 aa11.53□□□□□ -0.56
SDC1-202ENST00000381150 SGK494Q96LW2 274 aa11.53□□□□□ -0.56
SDC1-202ENST00000381150 SMG1Q96Q15 3661 aaKnown RBP11.52□□□□□ -0.56
SDC1-202ENST00000381150 M0R2Z0 102 aa11.52□□□□□ -0.56
SDC1-202ENST00000381150 TSPOP30536 169 aa11.52□□□□□ -0.56
SDC1-202ENST00000381150 CENPWQ5EE01 88 aa11.52□□□□□ -0.56
SDC1-202ENST00000381150 ZNF826PQ6ZT77 177 aa11.52□□□□□ -0.56
SDC1-202ENST00000381150 TNRC6AQ8NDV7 1962 aaKnown RBP11.52□□□□□ -0.56
SDC1-202ENST00000381150 MED12LQ86YW9 2145 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 GATA2P23769 480 aaPredicted RBP11.52□□□□□ -0.57
SDC1-202ENST00000381150 RPL19P84098 196 aaKnown RBP11.52□□□□□ -0.57
SDC1-202ENST00000381150 ACSF3Q4G176 576 aaPredicted RBP11.52□□□□□ -0.57
SDC1-202ENST00000381150 LINC00696Q6ZRV3 163 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 MS4A5Q9H3V2 200 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 TECRQ9NZ01 308 aaKnown RBP11.52□□□□□ -0.57
SDC1-202ENST00000381150 FAM90A10PA6NDY2 464 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 FAM90A18PA6NE21 464 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 FAM90A16PA6NEW6 464 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 HELTA6NFD8 242 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 FAM90A20PA6NIJ5 464 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 FAM90A8PA6NJQ4 464 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 FAM90A7PA6NKC0 464 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 FAM90A22PA8MWA6 464 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 FAM90A12PA8MX19 464 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 FAM90A5PA8MXJ8 464 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 FAM90A23PA8MXZ1 464 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 FAM90A15PP0C7V4 464 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 FAM90A13PP0C7W8 464 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 FAM90A14PP0C7W9 464 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 FAM90A24PP0C7X0 464 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 SSTR5P35346 364 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 TMEM164Q5U3C3 297 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms