RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 ZNF645Q8N7E2 425 aa11.99□□□□□ -0.49
VCX3A-201ENST00000381089 MCFD2Q8NI22 146 aa11.99□□□□□ -0.49
VCX3A-201ENST00000381089 MAFIPQ8WZ33 124 aa11.99□□□□□ -0.49
VCX3A-201ENST00000381089 EEF1AKMT3Q96AZ1 226 aa11.99□□□□□ -0.49
VCX3A-201ENST00000381089 SLIRPQ9GZT3 109 aaKnown RBP11.99□□□□□ -0.49
VCX3A-201ENST00000381089 TRAV18A0A075B6X5 111 aa11.98□□□□□ -0.49
VCX3A-201ENST00000381089 A8MWP6 167 aa11.98□□□□□ -0.49
VCX3A-201ENST00000381089 CTDSP2O14595 271 aa11.98□□□□□ -0.49
VCX3A-201ENST00000381089 ELK1P19419 428 aa11.98□□□□□ -0.49
VCX3A-201ENST00000381089 MAS1LP35410 378 aa11.98□□□□□ -0.49
VCX3A-201ENST00000381089 RPL27AP46776 148 aaKnown RBP11.98□□□□□ -0.49
VCX3A-201ENST00000381089 APOC4P55056 127 aa11.98□□□□□ -0.49
VCX3A-201ENST00000381089 ARL6IP1Q15041 203 aa11.98□□□□□ -0.49
VCX3A-201ENST00000381089 CLEC19AQ6UXS0 136 aa11.98□□□□□ -0.49
VCX3A-201ENST00000381089 RBPMS2Q6ZRY4 209 aaKnown RBP11.98□□□□□ -0.49
VCX3A-201ENST00000381089 UXS1Q8NBZ7 420 aa11.98□□□□□ -0.49
VCX3A-201ENST00000381089 CACNG8Q8WXS5 425 aa11.98□□□□□ -0.49
VCX3A-201ENST00000381089 FYTTD1Q96QD9 318 aaKnown RBP11.98□□□□□ -0.49
VCX3A-201ENST00000381089 ELF5Q9UKW6 265 aaPredicted RBP11.98□□□□□ -0.49
VCX3A-201ENST00000381089 KLK5Q9Y337 293 aaPredicted RBP11.98□□□□□ -0.49
VCX3A-201ENST00000381089 TRAV25A0A0B4J276 109 aa11.97□□□□□ -0.49
VCX3A-201ENST00000381089 TMEM213A2RRL7 107 aa11.97□□□□□ -0.49
VCX3A-201ENST00000381089 TMEM235A6NFC5 223 aa11.97□□□□□ -0.49
VCX3A-201ENST00000381089 HMX3A6NHT5 357 aa11.97□□□□□ -0.49
VCX3A-201ENST00000381089 MFNGO00587 321 aa11.97□□□□□ -0.49
VCX3A-201ENST00000381089 SCGNO76038 276 aa11.97□□□□□ -0.49
VCX3A-201ENST00000381089 SCAF4O95104 1147 aaKnown RBP11.97□□□□□ -0.49
VCX3A-201ENST00000381089 CTXN2P0C2S0 81 aa11.97□□□□□ -0.49
VCX3A-201ENST00000381089 HIST1H1BP16401 226 aaKnown RBP11.97□□□□□ -0.49
VCX3A-201ENST00000381089 EDN2P20800 178 aa11.97□□□□□ -0.49
VCX3A-201ENST00000381089 BMI1P35226 326 aa11.97□□□□□ -0.49
VCX3A-201ENST00000381089 CDNFQ49AH0 187 aa11.97□□□□□ -0.49
VCX3A-201ENST00000381089 Q6ZS49 121 aa11.97□□□□□ -0.49
VCX3A-201ENST00000381089 SLC38A6Q8IZM9 456 aa11.97□□□□□ -0.49
VCX3A-201ENST00000381089 OR1L6Q8NGR2 347 aa11.97□□□□□ -0.49
VCX3A-201ENST00000381089 OR4S2Q8NH73 311 aa11.97□□□□□ -0.49
VCX3A-201ENST00000381089 MARC2Q969Z3 335 aa11.97□□□□□ -0.49
VCX3A-201ENST00000381089 S100A16Q96FQ6 103 aaKnown RBP11.97□□□□□ -0.49
VCX3A-201ENST00000381089 OR2A7Q96R45 310 aa11.97□□□□□ -0.49
VCX3A-201ENST00000381089 MIXL1Q9H2W2 232 aa11.97□□□□□ -0.49
VCX3A-201ENST00000381089 DIABLOQ9NR28 239 aa11.97□□□□□ -0.49
VCX3A-201ENST00000381089 SLC2A9Q9NRM0 540 aa11.97□□□□□ -0.49
VCX3A-201ENST00000381089 MLXQ9UH92 298 aa11.97□□□□□ -0.49
VCX3A-201ENST00000381089 TP53TG1Q9Y2A0 90 aa11.97□□□□□ -0.49
VCX3A-201ENST00000381089 DMRT1Q9Y5R6 373 aa11.97□□□□□ -0.49
VCX3A-201ENST00000381089 A0A0J9YWU9 116 aa11.96□□□□□ -0.49
VCX3A-201ENST00000381089 TEX22C9J3V5 150 aa11.96□□□□□ -0.49
VCX3A-201ENST00000381089 KBTBD11O94819 623 aa11.96□□□□□ -0.49
VCX3A-201ENST00000381089 IGHV3-23P01764 117 aa11.96□□□□□ -0.49
VCX3A-201ENST00000381089 APOA1P02647 267 aa11.96□□□□□ -0.49
VCX3A-201ENST00000381089 PTHLHP12272 177 aa11.96□□□□□ -0.49
VCX3A-201ENST00000381089 DEFA4P12838 97 aa11.96□□□□□ -0.49
VCX3A-201ENST00000381089 TNFRSF9Q07011 255 aa11.96□□□□□ -0.49
VCX3A-201ENST00000381089 TM4SF20Q53R12 229 aa11.96□□□□□ -0.49
VCX3A-201ENST00000381089 OR2B11Q5JQS5 317 aa11.96□□□□□ -0.49
VCX3A-201ENST00000381089 TMEM69Q5SWH9 247 aa11.96□□□□□ -0.49
VCX3A-201ENST00000381089 CEMP1Q6PRD7 247 aaPredicted RBP11.96□□□□□ -0.49
VCX3A-201ENST00000381089 WFDC3Q8IUB2 231 aa11.96□□□□□ -0.49
VCX3A-201ENST00000381089 TMEM217Q8N7C4 229 aa11.96□□□□□ -0.49
VCX3A-201ENST00000381089 CXorf58Q96LI9 332 aa11.96□□□□□ -0.49
VCX3A-201ENST00000381089 CCDC140Q96MF4 163 aa11.96□□□□□ -0.49
VCX3A-201ENST00000381089 BATF3Q9NR55 127 aa11.96□□□□□ -0.49
VCX3A-201ENST00000381089 EXTL2Q9UBQ6 330 aa11.96□□□□□ -0.49
VCX3A-201ENST00000381089 TRBV7-1A0A0A6YYK4 115 aa11.95□□□□□ -0.5
VCX3A-201ENST00000381089 J3QRK9 145 aa11.95□□□□□ -0.5
VCX3A-201ENST00000381089 SPRY2O43597 315 aa11.95□□□□□ -0.5
VCX3A-201ENST00000381089 DTYMKP23919 212 aa11.95□□□□□ -0.5
VCX3A-201ENST00000381089 PSMB6P28072 239 aa11.95□□□□□ -0.5
VCX3A-201ENST00000381089 TAS2R20P59543 309 aa11.95□□□□□ -0.5
VCX3A-201ENST00000381089 GNG2P59768 71 aa11.95□□□□□ -0.5
VCX3A-201ENST00000381089 BTNL8Q6UX41 500 aa11.95□□□□□ -0.5
VCX3A-201ENST00000381089 Q6ZWC4 215 aa11.95□□□□□ -0.5
VCX3A-201ENST00000381089 LYG2Q86SG7 212 aa11.95□□□□□ -0.5
VCX3A-201ENST00000381089 VKORC1L1Q8N0U8 176 aa11.95□□□□□ -0.5
VCX3A-201ENST00000381089 NUDCD2Q8WVJ2 157 aa11.95□□□□□ -0.5
VCX3A-201ENST00000381089 HSD17B10Q99714 261 aaKnown RBP11.95□□□□□ -0.5
VCX3A-201ENST00000381089 NXF2Q9GZY0 626 aaKnown RBP11.95□□□□□ -0.5
VCX3A-201ENST00000381089 RBMX2Q9Y388 322 aaKnown RBP11.95□□□□□ -0.5
VCX3A-201ENST00000381089 OR2W1Q9Y3N9 320 aa11.95□□□□□ -0.5
VCX3A-201ENST00000381089 SELENOKQ9Y6D0 94 aa11.95□□□□□ -0.5
VCX3A-201ENST00000381089 FRAS1Q86XX4 4008 aa11.94□□□□□ -0.5
VCX3A-201ENST00000381089 A0A0A6YYH2 397 aa11.94□□□□□ -0.5
VCX3A-201ENST00000381089 A6NJ64 397 aa11.94□□□□□ -0.5
VCX3A-201ENST00000381089 UBE2CO00762 179 aa11.94□□□□□ -0.5
VCX3A-201ENST00000381089 XRCC3O43542 346 aa11.94□□□□□ -0.5
VCX3A-201ENST00000381089 HRASP01112 189 aa11.94□□□□□ -0.5
VCX3A-201ENST00000381089 CRYGCP07315 174 aa11.94□□□□□ -0.5
VCX3A-201ENST00000381089 IL6RP08887 468 aaPredicted RBP11.94□□□□□ -0.5
VCX3A-201ENST00000381089 ZNF735P0CB33 412 aa11.94□□□□□ -0.5
VCX3A-201ENST00000381089 ATF4P18848 351 aaPredicted RBP11.94□□□□□ -0.5
VCX3A-201ENST00000381089 CNPY1Q3B7I2 92 aa11.94□□□□□ -0.5
VCX3A-201ENST00000381089 CNIH2Q6PI25 160 aa11.94□□□□□ -0.5
VCX3A-201ENST00000381089 SNX29P2Q8IUI4 249 aa11.94□□□□□ -0.5
VCX3A-201ENST00000381089 OR2C3Q8N628 320 aa11.94□□□□□ -0.5
VCX3A-201ENST00000381089 TMEM167AQ8TBQ9 72 aa11.94□□□□□ -0.5
VCX3A-201ENST00000381089 TCTEX1D2Q8WW35 142 aa11.94□□□□□ -0.5
VCX3A-201ENST00000381089 CMTM3Q96MX0 182 aa11.94□□□□□ -0.5
VCX3A-201ENST00000381089 AIFM2Q9BRQ8 373 aa11.94□□□□□ -0.5
VCX3A-201ENST00000381089 AUNIPQ9H7T9 357 aa11.94□□□□□ -0.5
VCX3A-201ENST00000381089 MRPL27Q9P0M9 148 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms