RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 P2RX4Q99571 388 aa10.39□□□□□ -0.75
VPS16-202ENST00000380445 NIPSNAP3BQ9BS92 247 aa10.39□□□□□ -0.75
VPS16-202ENST00000380445 HEYLQ9NQ87 328 aaPredicted RBP10.39□□□□□ -0.75
VPS16-202ENST00000380445 TANC2Q9HCD6 1990 aa10.38□□□□□ -0.75
VPS16-202ENST00000380445 ELOA3CA0A087WX78 387 aaPredicted RBP10.38□□□□□ -0.75
VPS16-202ENST00000380445 MAP1LC3B2A6NCE7 125 aa10.38□□□□□ -0.75
VPS16-202ENST00000380445 TMEM178BH3BS89 294 aa10.38□□□□□ -0.75
VPS16-202ENST00000380445 BCL2P10415 239 aa10.38□□□□□ -0.75
VPS16-202ENST00000380445 ZNF726P1Q15940 193 aa10.38□□□□□ -0.75
VPS16-202ENST00000380445 SPINK9Q5DT21 86 aa10.38□□□□□ -0.75
VPS16-202ENST00000380445 SAPCD1Q5SSQ6 148 aa10.38□□□□□ -0.75
VPS16-202ENST00000380445 CYB561D1Q8N8Q1 229 aa10.38□□□□□ -0.75
VPS16-202ENST00000380445 OR5R1Q8NH85 324 aa10.38□□□□□ -0.75
VPS16-202ENST00000380445 MAP1LC3BQ9GZQ8 125 aa10.38□□□□□ -0.75
VPS16-202ENST00000380445 APC2O95996 2303 aa10.38□□□□□ -0.75
VPS16-202ENST00000380445 HCFC1P51610 2035 aa10.38□□□□□ -0.75
VPS16-202ENST00000380445 TRGV8A0A0C4DH27 118 aa10.38□□□□□ -0.75
VPS16-202ENST00000380445 C15orf62A8K5M9 175 aa10.38□□□□□ -0.75
VPS16-202ENST00000380445 TAGLN2P37802 199 aaKnown RBP10.38□□□□□ -0.75
VPS16-202ENST00000380445 MAJINQ3KP22 176 aa10.38□□□□□ -0.75
VPS16-202ENST00000380445 SLC25A48Q6ZT89 311 aaKnown RBP10.38□□□□□ -0.75
VPS16-202ENST00000380445 TGIF2LYQ8IUE0 185 aa10.38□□□□□ -0.75
VPS16-202ENST00000380445 RNASE6Q93091 150 aaKnown RBP10.38□□□□□ -0.75
VPS16-202ENST00000380445 RAB39BQ96DA2 213 aa10.38□□□□□ -0.75
VPS16-202ENST00000380445 NPCDR1Q9BY65 106 aa10.38□□□□□ -0.75
VPS16-202ENST00000380445 DSCAML1Q8TD84 2053 aa10.38□□□□□ -0.75
VPS16-202ENST00000380445 ICE1Q9Y2F5 2266 aa10.38□□□□□ -0.75
VPS16-202ENST00000380445 RP1L1Q8IWN7 2480 aaPredicted RBP10.38□□□□□ -0.75
VPS16-202ENST00000380445 ZFP92A6NM28 416 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 HIST1H2BKO60814 126 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 MPDU1O75352 247 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 HIST1H2BJP06899 126 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 TMEM11P17152 192 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 HIST1H2BOP23527 126 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 HIST1H2BBP33778 126 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 HIST1H2BDP58876 126 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 RAB11AP62491 216 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 HIST1H2BCP62807 126 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 RPL31P62899 125 aaKnown RBP10.37□□□□□ -0.75
VPS16-202ENST00000380445 HIST2H2BEQ16778 126 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.37□□□□□ -0.75
VPS16-202ENST00000380445 VKORC1L1Q8N0U8 176 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 RPP25LQ8N5L8 163 aaKnown RBP10.37□□□□□ -0.75
VPS16-202ENST00000380445 HIST1H2BHQ93079 126 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 LHX4Q969G2 390 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 HIST1H2BNQ99877 126 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 HIST1H2BMQ99879 126 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 DYNLRB1Q9NP97 96 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 TMEM106BQ9NUM4 274 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 VAX2Q9UIW0 290 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 RAI1Q7Z5J4 1906 aaPredicted RBP10.37□□□□□ -0.75
VPS16-202ENST00000380445 ANKRD11Q6UB99 2663 aaPredicted RBP10.37□□□□□ -0.75
VPS16-202ENST00000380445 CTXND1A0A1B0GTU2 59 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 C15orf61A6NNL5 157 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 CD1BP29016 333 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 POU2AF1Q16633 256 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 RTL8BQ17RB0 113 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 ZCCHC24Q8N2G6 241 aaKnown RBP10.37□□□□□ -0.75
VPS16-202ENST00000380445 OR10G9Q8NGN4 311 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 OR10G7Q8NGN6 311 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 CCL17Q92583 94 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 TVP23CQ96ET8 276 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 YPEL4Q96NS1 127 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 ACTR3CQ9C0K3 210 aaPredicted RBP10.37□□□□□ -0.75
VPS16-202ENST00000380445 PLCE1Q9P212 2302 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 SMCO3A2RU48 225 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 SHISA9B4DS77 424 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 NDUFB3O43676 98 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 MDKP21741 143 aaPredicted RBP10.37□□□□□ -0.75
VPS16-202ENST00000380445 APOBEC3AP31941 199 aaPredicted RBP10.37□□□□□ -0.75
VPS16-202ENST00000380445 VDAC2P45880 294 aaPredicted RBP10.37□□□□□ -0.75
VPS16-202ENST00000380445 LRRC10Q5BKY1 277 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 FFAR4Q5NUL3 377 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 C1orf229Q6ZS94 237 aaPredicted RBP10.37□□□□□ -0.75
VPS16-202ENST00000380445 SLC35E3Q7Z769 313 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 PACRGQ96M98 296 aaPredicted RBP10.37□□□□□ -0.75
VPS16-202ENST00000380445 ZNF714Q96N38 554 aa10.37□□□□□ -0.75
VPS16-202ENST00000380445 FOXA2Q9Y261 457 aaPredicted RBP10.37□□□□□ -0.75
VPS16-202ENST00000380445 A0A087WWC5 75 aa10.36□□□□□ -0.75
VPS16-202ENST00000380445 CYB5BO43169 146 aa10.36□□□□□ -0.75
VPS16-202ENST00000380445 CD3EP07766 207 aa10.36□□□□□ -0.75
VPS16-202ENST00000380445 NPSP0C0P6 89 aa10.36□□□□□ -0.75
VPS16-202ENST00000380445 FGF8P55075 233 aaPredicted RBP10.36□□□□□ -0.75
VPS16-202ENST00000380445 ACOT6Q3I5F7 207 aaPredicted RBP10.36□□□□□ -0.75
VPS16-202ENST00000380445 OR4A47Q6IF82 309 aa10.36□□□□□ -0.75
VPS16-202ENST00000380445 ACSM6Q6P461 480 aa10.36□□□□□ -0.75
VPS16-202ENST00000380445 ZNF664Q8N3J9 261 aa10.36□□□□□ -0.75
VPS16-202ENST00000380445 ENY2Q9NPA8 101 aa10.36□□□□□ -0.75
VPS16-202ENST00000380445 TCF19Q9Y242 345 aa10.36□□□□□ -0.75
VPS16-202ENST00000380445 WDR83OSQ9Y284 106 aa10.36□□□□□ -0.75
VPS16-202ENST00000380445 HSPE1P61604 102 aaKnown RBP10.36□□□□□ -0.75
VPS16-202ENST00000380445 UTF1Q5T230 341 aa10.36□□□□□ -0.75
VPS16-202ENST00000380445 TMEM14BQ9NUH8 114 aa10.36□□□□□ -0.75
VPS16-202ENST00000380445 B4DEV8 164 aa10.35□□□□□ -0.75
VPS16-202ENST00000380445 B9A039 149 aa10.35□□□□□ -0.75
VPS16-202ENST00000380445 E7EQL1 145 aa10.35□□□□□ -0.75
VPS16-202ENST00000380445 DLEU1O43261 78 aa10.35□□□□□ -0.75
VPS16-202ENST00000380445 MMP23AO75900 390 aa10.35□□□□□ -0.75
VPS16-202ENST00000380445 DLK1P80370 383 aa10.35□□□□□ -0.75
VPS16-202ENST00000380445 TFF3Q07654 80 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms