RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 SPG11Q96JI7 2443 aa14□□□□□ -0.17
THUMPD2-201ENST00000378727 WNK2Q9Y3S1 2297 aa14□□□□□ -0.17
THUMPD2-201ENST00000378727 IGHV2-70DA0A0C4DH43 119 aa13.99□□□□□ -0.17
THUMPD2-201ENST00000378727 A0A1W2PPI3 338 aa13.99□□□□□ -0.17
THUMPD2-201ENST00000378727 COX6B1P14854 86 aa13.99□□□□□ -0.17
THUMPD2-201ENST00000378727 RAB5CP51148 216 aa13.99□□□□□ -0.17
THUMPD2-201ENST00000378727 PRCDQ00LT1 54 aa13.99□□□□□ -0.17
THUMPD2-201ENST00000378727 TPTE2P1Q5T6R2 138 aa13.99□□□□□ -0.17
THUMPD2-201ENST00000378727 LYPD6BQ8NI32 183 aa13.99□□□□□ -0.17
THUMPD2-201ENST00000378727 SCGB1C1Q8TD33 95 aa13.99□□□□□ -0.17
THUMPD2-201ENST00000378727 SIRPDQ9H106 197 aa13.99□□□□□ -0.17
THUMPD2-201ENST00000378727 KMT2BQ9UMN6 2715 aaPredicted RBP13.99□□□□□ -0.17
THUMPD2-201ENST00000378727 HTR1DP28221 377 aa13.99□□□□□ -0.17
THUMPD2-201ENST00000378727 ATP5J2P56134 94 aa13.99□□□□□ -0.17
THUMPD2-201ENST00000378727 ATP6V1FQ16864 119 aa13.99□□□□□ -0.17
THUMPD2-201ENST00000378727 MRGPRG-AS1Q2M3A8 158 aa13.99□□□□□ -0.17
THUMPD2-201ENST00000378727 VWC2Q2TAL6 325 aa13.99□□□□□ -0.17
THUMPD2-201ENST00000378727 C10orf105Q8TEF2 133 aa13.99□□□□□ -0.17
THUMPD2-201ENST00000378727 FAM168AQ92567 244 aa13.99□□□□□ -0.17
THUMPD2-201ENST00000378727 TMEM147Q9BVK8 224 aa13.99□□□□□ -0.17
THUMPD2-201ENST00000378727 HINT2Q9BX68 163 aa13.99□□□□□ -0.17
THUMPD2-201ENST00000378727 PRSS46E5RG02 174 aa13.98□□□□□ -0.17
THUMPD2-201ENST00000378727 TRIM77I1YAP6 450 aa13.98□□□□□ -0.17
THUMPD2-201ENST00000378727 SLC25A17O43808 307 aa13.98□□□□□ -0.17
THUMPD2-201ENST00000378727 PRH1P02810 166 aa13.98□□□□□ -0.17
THUMPD2-201ENST00000378727 USF1P22415 310 aaPredicted RBP13.98□□□□□ -0.17
THUMPD2-201ENST00000378727 CAMLGP49069 296 aa13.98□□□□□ -0.17
THUMPD2-201ENST00000378727 RPL8P62917 257 aaKnown RBP13.98□□□□□ -0.17
THUMPD2-201ENST00000378727 RPP30P78346 268 aaKnown RBP13.98□□□□□ -0.17
THUMPD2-201ENST00000378727 LHFPL4Q7Z7J7 247 aa13.98□□□□□ -0.17
THUMPD2-201ENST00000378727 OR5B3Q8NH48 314 aa13.98□□□□□ -0.17
THUMPD2-201ENST00000378727 OR4A5Q8NH83 315 aa13.98□□□□□ -0.17
THUMPD2-201ENST00000378727 VSTM2AQ8TAG5 236 aa13.98□□□□□ -0.17
THUMPD2-201ENST00000378727 TPSG1Q9NRR2 321 aa13.98□□□□□ -0.17
THUMPD2-201ENST00000378727 FKBP11Q9NYL4 201 aa13.98□□□□□ -0.17
THUMPD2-201ENST00000378727 DPM3Q9P2X0 92 aa13.98□□□□□ -0.17
THUMPD2-201ENST00000378727 FBXO7Q9Y3I1 522 aa13.98□□□□□ -0.17
THUMPD2-201ENST00000378727 UMAD1C9J7I0 102 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 RNASEK-C17orf49H0YIS7 233 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 OR8U8P0C7N1 319 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 HOXB4P17483 251 aaPredicted RBP13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 LGALS7P47929 136 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 F2RL1P55085 397 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 TAF15Q92804 592 aaKnown RBP eCLIP13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 LINC00052Q96N35 136 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 PIMREGQ9BSJ6 248 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 ZNF430Q9H8G1 570 aaPredicted RBP13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 UQCC1Q9NVA1 299 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 A0A1W2PRD5 423 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 A0A1W2PRF3 423 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 A0A1W2PRM7 423 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 RAB19A4D1S5 217 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 VWC2LB2RUY7 222 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 E7EUB6 86 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 CNTFRP26992 372 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 ZNF616Q08AN1 781 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 PJVKQ0ZLH3 352 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 VMA21Q3ZAQ7 101 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 IL34Q6ZMJ4 242 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 ETV3LQ6ZN32 361 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 SLC24A4Q8NFF2 622 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 FAM213BQ8TBF2 198 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 PSMG3Q9BT73 122 aaPredicted RBP13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 PLEKHA3Q9HB20 300 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 ENY2Q9NPA8 101 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 NDUFA4L2Q9NRX3 87 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 ABCA2Q9BZC7 2435 aa13.97□□□□□ -0.17
THUMPD2-201ENST00000378727 FAM157AC9JC47 383 aa13.96□□□□□ -0.17
THUMPD2-201ENST00000378727 CA2P00918 260 aa13.96□□□□□ -0.17
THUMPD2-201ENST00000378727 MDKP21741 143 aaPredicted RBP13.96□□□□□ -0.17
THUMPD2-201ENST00000378727 SRSF3P84103 164 aaKnown RBP13.96□□□□□ -0.17
THUMPD2-201ENST00000378727 HILPDAQ9Y5L2 63 aa13.96□□□□□ -0.17
THUMPD2-201ENST00000378727 IGHV4-61A0A0C4DH41 118 aa13.95□□□□□ -0.18
THUMPD2-201ENST00000378727 CGB1A6NKQ9 187 aa13.95□□□□□ -0.18
THUMPD2-201ENST00000378727 NUDT19A8MXV4 375 aa13.95□□□□□ -0.18
THUMPD2-201ENST00000378727 TIMM23O14925 209 aa13.95□□□□□ -0.18
THUMPD2-201ENST00000378727 CRYGBP07316 175 aa13.95□□□□□ -0.18
THUMPD2-201ENST00000378727 PAX6P26367 422 aa13.95□□□□□ -0.18
THUMPD2-201ENST00000378727 OR10W1Q8NGF6 305 aa13.95□□□□□ -0.18
THUMPD2-201ENST00000378727 COMMD5Q9GZQ3 224 aa13.95□□□□□ -0.18
THUMPD2-201ENST00000378727 PLXNB1O43157 2135 aa13.95□□□□□ -0.18
THUMPD2-201ENST00000378727 CHD6Q8TD26 2715 aa13.95□□□□□ -0.18
THUMPD2-201ENST00000378727 NDUFS8O00217 210 aa13.95□□□□□ -0.18
THUMPD2-201ENST00000378727 FOXH1O75593 365 aa13.95□□□□□ -0.18
THUMPD2-201ENST00000378727 SCAF4O95104 1147 aaKnown RBP13.95□□□□□ -0.18
THUMPD2-201ENST00000378727 NPY1RP25929 384 aa13.95□□□□□ -0.18
THUMPD2-201ENST00000378727 C10orf55Q5SWW7 151 aa13.95□□□□□ -0.18
THUMPD2-201ENST00000378727 OR1L8Q8NGR8 309 aa13.95□□□□□ -0.18
THUMPD2-201ENST00000378727 CFHR4Q92496 578 aa13.95□□□□□ -0.18
THUMPD2-201ENST00000378727 PERPQ96FX8 193 aa13.95□□□□□ -0.18
THUMPD2-201ENST00000378727 TBX15Q96SF7 602 aa13.95□□□□□ -0.18
THUMPD2-201ENST00000378727 A0A1B0GW64 132 aa13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 ZP3P21754 424 aa13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 CEACAM3P40198 252 aa13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 AKR1C1Q04828 323 aa13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 HNF4GQ14541 408 aa13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 PSG5Q15238 335 aa13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 AKR1C8PQ5T2L2 129 aa13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 CLEC2AQ6UVW9 174 aa13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 UQCC3Q6UW78 93 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms