RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 ZNF439Q8NDP4 499 aa15.93■□□□□ 0.14
SSU72-204ENST00000378726 ZNF714Q96N38 554 aa15.93■□□□□ 0.14
SSU72-204ENST00000378726 CACNA1BQ00975 2339 aa15.93■□□□□ 0.14
SSU72-204ENST00000378726 SEC14L6B5MCN3 397 aa15.92■□□□□ 0.14
SSU72-204ENST00000378726 RAB29O14966 203 aa15.92■□□□□ 0.14
SSU72-204ENST00000378726 FCGR3BO75015 233 aa15.92■□□□□ 0.14
SSU72-204ENST00000378726 LY86O95711 162 aa15.92■□□□□ 0.14
SSU72-204ENST00000378726 LYG1Q8N1E2 194 aa15.92■□□□□ 0.14
SSU72-204ENST00000378726 ZNF525Q8N782 197 aa15.92■□□□□ 0.14
SSU72-204ENST00000378726 ABHD5Q8WTS1 349 aa15.92■□□□□ 0.14
SSU72-204ENST00000378726 FAM210BQ96KR6 192 aa15.92■□□□□ 0.14
SSU72-204ENST00000378726 GPR61Q9BZJ8 451 aa15.92■□□□□ 0.14
SSU72-204ENST00000378726 PSENENQ9NZ42 101 aa15.92■□□□□ 0.14
SSU72-204ENST00000378726 YLPM1P49750 1951 aaKnown RBP15.92■□□□□ 0.14
SSU72-204ENST00000378726 B4DEV8 164 aa15.92■□□□□ 0.14
SSU72-204ENST00000378726 SYNGR2O43760 224 aa15.92■□□□□ 0.14
SSU72-204ENST00000378726 TRGC1P0CF51 173 aa15.92■□□□□ 0.14
SSU72-204ENST00000378726 C11orf71Q6IPW1 123 aa15.92■□□□□ 0.14
SSU72-204ENST00000378726 OR10A7Q8NGE5 316 aa15.92■□□□□ 0.14
SSU72-204ENST00000378726 FRZBQ92765 325 aa15.92■□□□□ 0.14
SSU72-204ENST00000378726 LAMP3Q9UQV4 416 aa15.92■□□□□ 0.14
SSU72-204ENST00000378726 CFAP46Q8IYW2 2715 aa15.92■□□□□ 0.14
SSU72-204ENST00000378726 C19orf84I3L1E1 186 aa15.91■□□□□ 0.14
SSU72-204ENST00000378726 P0C879 139 aa15.91■□□□□ 0.14
SSU72-204ENST00000378726 HIST1H1BP16401 226 aaKnown RBP15.91■□□□□ 0.14
SSU72-204ENST00000378726 MRPS11P82912 194 aaKnown RBP15.91■□□□□ 0.14
SSU72-204ENST00000378726 HIST3H2BBQ8N257 126 aa15.91■□□□□ 0.14
SSU72-204ENST00000378726 MBD3L1Q8WWY6 194 aa15.91■□□□□ 0.14
SSU72-204ENST00000378726 SAA2-SAA4A0A096LPE2 208 aa15.91■□□□□ 0.14
SSU72-204ENST00000378726 A0A1W2PPR1 153 aa15.91■□□□□ 0.14
SSU72-204ENST00000378726 LY6HO94772 140 aa15.91■□□□□ 0.14
SSU72-204ENST00000378726 SAA2P0DJI9 122 aaPredicted RBP15.91■□□□□ 0.14
SSU72-204ENST00000378726 DNLZQ5SXM8 178 aa15.91■□□□□ 0.14
SSU72-204ENST00000378726 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.91■□□□□ 0.14
SSU72-204ENST00000378726 OR13D1Q8NGV5 346 aa15.91■□□□□ 0.14
SSU72-204ENST00000378726 RCC1LQ96I51 464 aaKnown RBP15.91■□□□□ 0.14
SSU72-204ENST00000378726 C14orf144Q96I85 54 aa15.91■□□□□ 0.14
SSU72-204ENST00000378726 PRDM13Q9H4Q3 707 aa15.91■□□□□ 0.14
SSU72-204ENST00000378726 SLC25A48Q6ZT89 311 aaKnown RBP15.9■□□□□ 0.14
SSU72-204ENST00000378726 H2BFWTQ7Z2G1 175 aa15.9■□□□□ 0.14
SSU72-204ENST00000378726 S1PR3Q99500 378 aa15.9■□□□□ 0.14
SSU72-204ENST00000378726 SSX3Q99909 188 aa15.9■□□□□ 0.14
SSU72-204ENST00000378726 PPP1R2P9O14990 202 aa15.9■□□□□ 0.14
SSU72-204ENST00000378726 FSTL3O95633 263 aa15.9■□□□□ 0.14
SSU72-204ENST00000378726 HPRT1P00492 218 aa15.9■□□□□ 0.14
SSU72-204ENST00000378726 RND2P52198 227 aa15.9■□□□□ 0.14
SSU72-204ENST00000378726 CD81P60033 236 aa15.9■□□□□ 0.14
SSU72-204ENST00000378726 SDF2L1Q9HCN8 221 aa15.9■□□□□ 0.14
SSU72-204ENST00000378726 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.9■□□□□ 0.14
SSU72-204ENST00000378726 MARCH11A6NNE9 402 aa15.89■□□□□ 0.13
SSU72-204ENST00000378726 LRRC75BQ2VPJ9 315 aa15.89■□□□□ 0.13
SSU72-204ENST00000378726 SSX9Q7RTT3 188 aa15.89■□□□□ 0.13
SSU72-204ENST00000378726 R3HDM4Q96D70 268 aa15.89■□□□□ 0.13
SSU72-204ENST00000378726 CLDN34H7C241 214 aa15.88■□□□□ 0.13
SSU72-204ENST00000378726 PNRC1Q12796 327 aaPredicted RBP15.88■□□□□ 0.13
SSU72-204ENST00000378726 NEU4Q8WWR8 484 aaPredicted RBP15.88■□□□□ 0.13
SSU72-204ENST00000378726 PSMG3Q9BT73 122 aaPredicted RBP15.88■□□□□ 0.13
SSU72-204ENST00000378726 RALYQ9UKM9 306 aaKnown RBP15.88■□□□□ 0.13
SSU72-204ENST00000378726 ELOA3CA0A087WX78 387 aaPredicted RBP15.88■□□□□ 0.13
SSU72-204ENST00000378726 FAM90A26D6RGX4 464 aa15.88■□□□□ 0.13
SSU72-204ENST00000378726 ELLP55199 621 aaPredicted RBP15.88■□□□□ 0.13
SSU72-204ENST00000378726 DTX2Q86UW9 622 aa15.88■□□□□ 0.13
SSU72-204ENST00000378726 DDB2Q92466 427 aa15.88■□□□□ 0.13
SSU72-204ENST00000378726 TMEM242Q9NWH2 141 aa15.88■□□□□ 0.13
SSU72-204ENST00000378726 ZNRD1Q9P1U0 126 aa15.88■□□□□ 0.13
SSU72-204ENST00000378726 HRNRQ86YZ3 2850 aaPredicted RBP15.88■□□□□ 0.13
SSU72-204ENST00000378726 CEBPZOSA8MTT3 80 aa15.87■□□□□ 0.13
SSU72-204ENST00000378726 PHOX2AO14813 284 aa15.87■□□□□ 0.13
SSU72-204ENST00000378726 RBFOX2O43251 390 aaKnown RBP eCLIP15.87■□□□□ 0.13
SSU72-204ENST00000378726 MDKP21741 143 aaPredicted RBP15.87■□□□□ 0.13
SSU72-204ENST00000378726 SPANXN5Q5MJ07 72 aa15.87■□□□□ 0.13
SSU72-204ENST00000378726 LILRB2Q8N423 598 aa15.87■□□□□ 0.13
SSU72-204ENST00000378726 RHOVQ96L33 236 aa15.87■□□□□ 0.13
SSU72-204ENST00000378726 OR4C12Q96R67 309 aa15.87■□□□□ 0.13
SSU72-204ENST00000378726 KIR2DS2P43631 304 aa15.87■□□□□ 0.13
SSU72-204ENST00000378726 THBS3P49746 956 aa15.87■□□□□ 0.13
SSU72-204ENST00000378726 TNFRSF9Q07011 255 aa15.87■□□□□ 0.13
SSU72-204ENST00000378726 TMEM41BQ5BJD5 291 aa15.87■□□□□ 0.13
SSU72-204ENST00000378726 ZNF841Q6ZN19 808 aa15.87■□□□□ 0.13
SSU72-204ENST00000378726 WDR61Q9GZS3 305 aaKnown RBP15.87■□□□□ 0.13
SSU72-204ENST00000378726 HSPB7Q9UBY9 170 aa15.87■□□□□ 0.13
SSU72-204ENST00000378726 VAX2Q9UIW0 290 aa15.87■□□□□ 0.13
SSU72-204ENST00000378726 USP24Q9UPU5 2620 aa15.86■□□□□ 0.13
SSU72-204ENST00000378726 RBMXL2O75526 392 aaKnown RBP15.86■□□□□ 0.13
SSU72-204ENST00000378726 TMEM155Q4W5P6 130 aa15.86■□□□□ 0.13
SSU72-204ENST00000378726 REC114Q7Z4M0 266 aa15.86■□□□□ 0.13
SSU72-204ENST00000378726 P2RX4Q99571 388 aa15.86■□□□□ 0.13
SSU72-204ENST00000378726 RBKSQ9H477 322 aa15.86■□□□□ 0.13
SSU72-204ENST00000378726 MAP1LC3B2A6NCE7 125 aa15.86■□□□□ 0.13
SSU72-204ENST00000378726 FABP4P15090 132 aa15.86■□□□□ 0.13
SSU72-204ENST00000378726 DLX6P56179 175 aa15.86■□□□□ 0.13
SSU72-204ENST00000378726 PKIAP61925 76 aa15.86■□□□□ 0.13
SSU72-204ENST00000378726 HBG1P69891 147 aa15.86■□□□□ 0.13
SSU72-204ENST00000378726 HBG2P69892 147 aa15.86■□□□□ 0.13
SSU72-204ENST00000378726 SERF2P84101 59 aa15.86■□□□□ 0.13
SSU72-204ENST00000378726 ADTRPQ96IZ2 230 aa15.86■□□□□ 0.13
SSU72-204ENST00000378726 MAP1LC3BQ9GZQ8 125 aa15.86■□□□□ 0.13
SSU72-204ENST00000378726 A0A1B0GV90 55 aa15.85■□□□□ 0.13
SSU72-204ENST00000378726 IFNA10P01566 189 aa15.85■□□□□ 0.13
SSU72-204ENST00000378726 RNF224P0DH78 156 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms