RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 RASL11BQ9BPW5 248 aa12.56□□□□□ -0.4
CCDC107-204ENST00000378409 TMEM14BQ9NUH8 114 aa12.56□□□□□ -0.4
CCDC107-204ENST00000378409 VPREB3Q9UKI3 123 aa12.56□□□□□ -0.4
CCDC107-204ENST00000378409 FOXA2Q9Y261 457 aaPredicted RBP12.56□□□□□ -0.4
CCDC107-204ENST00000378409 OR51B2Q9Y5P1 312 aa12.56□□□□□ -0.4
CCDC107-204ENST00000378409 NSD1Q96L73 2696 aaPredicted RBP12.56□□□□□ -0.4
CCDC107-204ENST00000378409 ZFHX3Q15911 3703 aa12.56□□□□□ -0.4
CCDC107-204ENST00000378409 FCN1O00602 326 aa12.55□□□□□ -0.4
CCDC107-204ENST00000378409 CHST1O43916 411 aa12.55□□□□□ -0.4
CCDC107-204ENST00000378409 ACTL6BO94805 426 aa12.55□□□□□ -0.4
CCDC107-204ENST00000378409 CA2P00918 260 aa12.55□□□□□ -0.4
CCDC107-204ENST00000378409 IFNA17P01571 189 aa12.55□□□□□ -0.4
CCDC107-204ENST00000378409 MYOD1P15172 320 aa12.55□□□□□ -0.4
CCDC107-204ENST00000378409 S100A10P60903 97 aa12.55□□□□□ -0.4
CCDC107-204ENST00000378409 TNXAQ16473 311 aa12.55□□□□□ -0.4
CCDC107-204ENST00000378409 C16orf82Q7Z2V1 217 aa12.55□□□□□ -0.4
CCDC107-204ENST00000378409 ZNF429Q86V71 674 aa12.55□□□□□ -0.4
CCDC107-204ENST00000378409 C5orf56Q8N8D9 126 aa12.55□□□□□ -0.4
CCDC107-204ENST00000378409 ASB13Q8WXK3 278 aa12.55□□□□□ -0.4
CCDC107-204ENST00000378409 DUX5Q96PT3 197 aa12.55□□□□□ -0.4
CCDC107-204ENST00000378409 FYTTD1Q96QD9 318 aaKnown RBP12.55□□□□□ -0.4
CCDC107-204ENST00000378409 NEURL2Q9BR09 285 aa12.55□□□□□ -0.4
CCDC107-204ENST00000378409 COMMD5Q9GZQ3 224 aa12.55□□□□□ -0.4
CCDC107-204ENST00000378409 MAGT1Q9H0U3 335 aa12.55□□□□□ -0.4
CCDC107-204ENST00000378409 FKBP11Q9NYL4 201 aa12.55□□□□□ -0.4
CCDC107-204ENST00000378409 POMT1Q9Y6A1 747 aa12.55□□□□□ -0.4
CCDC107-204ENST00000378409 WRBO00258 174 aa12.54□□□□□ -0.4
CCDC107-204ENST00000378409 FGF16O43320 207 aa12.54□□□□□ -0.4
CCDC107-204ENST00000378409 MBPP02686 304 aaPredicted RBP12.54□□□□□ -0.4
CCDC107-204ENST00000378409 OPN1MWP04001 364 aa12.54□□□□□ -0.4
CCDC107-204ENST00000378409 OPN1MW2P0DN77 364 aa12.54□□□□□ -0.4
CCDC107-204ENST00000378409 OPN1MW3P0DN78 364 aa12.54□□□□□ -0.4
CCDC107-204ENST00000378409 MAS1LP35410 378 aa12.54□□□□□ -0.4
CCDC107-204ENST00000378409 IL15RAQ13261 267 aa12.54□□□□□ -0.4
CCDC107-204ENST00000378409 RAB32Q13637 225 aa12.54□□□□□ -0.4
CCDC107-204ENST00000378409 SPINK9Q5DT21 86 aa12.54□□□□□ -0.4
CCDC107-204ENST00000378409 C10orf55Q5SWW7 151 aa12.54□□□□□ -0.4
CCDC107-204ENST00000378409 TMEM86BQ8N661 226 aa12.54□□□□□ -0.4
CCDC107-204ENST00000378409 OR2T35Q8NGX2 323 aa12.54□□□□□ -0.4
CCDC107-204ENST00000378409 PPP1R1CQ8WVI7 109 aa12.54□□□□□ -0.4
CCDC107-204ENST00000378409 HINT2Q9BX68 163 aa12.54□□□□□ -0.4
CCDC107-204ENST00000378409 HSPB7Q9UBY9 170 aa12.54□□□□□ -0.4
CCDC107-204ENST00000378409 LSM5Q9Y4Y9 91 aaKnown RBP12.54□□□□□ -0.4
CCDC107-204ENST00000378409 TEX50A0A1B0GTY4 177 aa12.53□□□□□ -0.4
CCDC107-204ENST00000378409 DNAJC9-AS1A6NH13 148 aa12.53□□□□□ -0.4
CCDC107-204ENST00000378409 SH2D7A6NKC9 451 aaPredicted RBP12.53□□□□□ -0.4
CCDC107-204ENST00000378409 FAM90A26D6RGX4 464 aa12.53□□□□□ -0.4
CCDC107-204ENST00000378409 SMLR1H3BR10 107 aa12.53□□□□□ -0.4
CCDC107-204ENST00000378409 CNIH1O95406 144 aa12.53□□□□□ -0.4
CCDC107-204ENST00000378409 FGF2P09038 288 aa12.53□□□□□ -0.4
CCDC107-204ENST00000378409 HSPE1P61604 102 aaKnown RBP12.53□□□□□ -0.4
CCDC107-204ENST00000378409 ID3Q02535 119 aa12.53□□□□□ -0.4
CCDC107-204ENST00000378409 TNFRSF9Q07011 255 aa12.53□□□□□ -0.4
CCDC107-204ENST00000378409 CD300CQ08708 224 aa12.53□□□□□ -0.4
CCDC107-204ENST00000378409 AARDQ4LEZ3 155 aa12.53□□□□□ -0.4
CCDC107-204ENST00000378409 OR1L8Q8NGR8 309 aa12.53□□□□□ -0.4
CCDC107-204ENST00000378409 ZNF418Q8TF45 676 aaPredicted RBP12.53□□□□□ -0.4
CCDC107-204ENST00000378409 ZNF257Q9Y2Q1 563 aa12.53□□□□□ -0.4
CCDC107-204ENST00000378409 FN1P02751 2386 aaKnown RBP12.53□□□□□ -0.4
CCDC107-204ENST00000378409 CEBPZOSA8MTT3 80 aa12.52□□□□□ -0.41
CCDC107-204ENST00000378409 K7EPK0 472 aa12.52□□□□□ -0.41
CCDC107-204ENST00000378409 M0QZK8 103 aa12.52□□□□□ -0.41
CCDC107-204ENST00000378409 SSSCA1O60232 199 aa12.52□□□□□ -0.41
CCDC107-204ENST00000378409 HLA-DRB1P01911 266 aa12.52□□□□□ -0.41
CCDC107-204ENST00000378409 AMY1AP04745 511 aa12.52□□□□□ -0.41
CCDC107-204ENST00000378409 FAM157CP0CG43 387 aa12.52□□□□□ -0.41
CCDC107-204ENST00000378409 PSMB6P28072 239 aa12.52□□□□□ -0.41
CCDC107-204ENST00000378409 RPL27AP46776 148 aaKnown RBP12.52□□□□□ -0.41
CCDC107-204ENST00000378409 COMPP49747 757 aaPredicted RBP12.52□□□□□ -0.41
CCDC107-204ENST00000378409 SPCS3P61009 180 aa12.52□□□□□ -0.41
CCDC107-204ENST00000378409 POLR2GP62487 172 aaKnown RBP eCLIP12.52□□□□□ -0.41
CCDC107-204ENST00000378409 SSBP2P81877 361 aaPredicted RBP12.52□□□□□ -0.41
CCDC107-204ENST00000378409 OR5B3Q8NH48 314 aa12.52□□□□□ -0.41
CCDC107-204ENST00000378409 OR52E5Q8NH55 327 aa12.52□□□□□ -0.41
CCDC107-204ENST00000378409 RBKSQ9H477 322 aa12.52□□□□□ -0.41
CCDC107-204ENST00000378409 ZFP57Q9NU63 452 aa12.52□□□□□ -0.41
CCDC107-204ENST00000378409 CACFD1Q9UGQ2 172 aa12.52□□□□□ -0.41
CCDC107-204ENST00000378409 RCL1Q9Y2P8 373 aaKnown RBP12.52□□□□□ -0.41
CCDC107-204ENST00000378409 SYNGR2O43760 224 aa12.51□□□□□ -0.41
CCDC107-204ENST00000378409 CRLF1O75462 422 aa12.51□□□□□ -0.41
CCDC107-204ENST00000378409 MED6O75586 246 aa12.51□□□□□ -0.41
CCDC107-204ENST00000378409 MPC2O95563 127 aa12.51□□□□□ -0.41
CCDC107-204ENST00000378409 HNRNPCP07910 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
CCDC107-204ENST00000378409 HOXA1P49639 335 aaPredicted RBP12.51□□□□□ -0.41
CCDC107-204ENST00000378409 CX3CL1P78423 397 aa12.51□□□□□ -0.41
CCDC107-204ENST00000378409 PRCDQ00LT1 54 aa12.51□□□□□ -0.41
CCDC107-204ENST00000378409 FXYD3Q14802 87 aa12.51□□□□□ -0.41
CCDC107-204ENST00000378409 Q5BKY6 102 aa12.51□□□□□ -0.41
CCDC107-204ENST00000378409 C9orf152Q5JTZ5 239 aa12.51□□□□□ -0.41
CCDC107-204ENST00000378409 TCTE3Q8IZS6 198 aa12.51□□□□□ -0.41
CCDC107-204ENST00000378409 GRPEL2Q8TAA5 225 aa12.51□□□□□ -0.41
CCDC107-204ENST00000378409 ABHD5Q8WTS1 349 aa12.51□□□□□ -0.41
CCDC107-204ENST00000378409 SRSF12Q8WXF0 261 aaKnown RBP12.51□□□□□ -0.41
CCDC107-204ENST00000378409 HSPB9Q9BQS6 159 aa12.51□□□□□ -0.41
CCDC107-204ENST00000378409 TRAV14DV4A0A0A6YYC5 116 aa12.5□□□□□ -0.41
CCDC107-204ENST00000378409 E7EUB6 86 aa12.5□□□□□ -0.41
CCDC107-204ENST00000378409 GPR137BO60478 399 aa12.5□□□□□ -0.41
CCDC107-204ENST00000378409 RLN2P04090 185 aa12.5□□□□□ -0.41
CCDC107-204ENST00000378409 PET100P0DJ07 73 aa12.5□□□□□ -0.41
CCDC107-204ENST00000378409 IAPPP10997 89 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms