RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 ZDHHC16Q969W1 377 aa7.12□□□□□ -1.27
VPS36-201ENST00000378060 LOXL4Q96JB6 756 aa7.12□□□□□ -1.27
VPS36-201ENST00000378060 MRPL37Q9BZE1 423 aaKnown RBP7.12□□□□□ -1.27
VPS36-201ENST00000378060 TMEM189A5PLL7 270 aa7.12□□□□□ -1.27
VPS36-201ENST00000378060 FAM90A27PA6NNH2 459 aa7.12□□□□□ -1.27
VPS36-201ENST00000378060 KIR2DL2P43627 348 aaPredicted RBP7.12□□□□□ -1.27
VPS36-201ENST00000378060 ABHD12Q8N2K0 398 aa7.12□□□□□ -1.27
VPS36-201ENST00000378060 ZNF525Q8N782 197 aa7.12□□□□□ -1.27
VPS36-201ENST00000378060 OR4C13Q8NGP0 309 aa7.12□□□□□ -1.27
VPS36-201ENST00000378060 WDYHV1Q96HA8 205 aa7.12□□□□□ -1.27
VPS36-201ENST00000378060 ZIC3O60481 467 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 HLA-DRB1P01911 266 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 MAS1LP35410 378 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 GPX4P36969 197 aaPredicted RBP7.11□□□□□ -1.27
VPS36-201ENST00000378060 RPS20P60866 119 aaKnown RBP7.11□□□□□ -1.27
VPS36-201ENST00000378060 ID3Q02535 119 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 SRSF9Q13242 221 aaKnown RBP eCLIP7.11□□□□□ -1.27
VPS36-201ENST00000378060 KRTCAP3Q53RY4 240 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 C1orf185Q5T7R7 199 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 C18orf12Q96KH6 178 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 CBLN4Q9NTU7 201 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 HSPB7Q9UBY9 170 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 MRPS18CQ9Y3D5 142 aaKnown RBP7.11□□□□□ -1.27
VPS36-201ENST00000378060 AKAP13Q12802 2813 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 PCDH15Q96QU1 1955 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 IGKV1-9A0A0C4DH69 117 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 TIAF1O95411 115 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 CA2P00918 260 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 CD5P06127 495 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 HINT1P49773 126 aaPredicted RBP7.11□□□□□ -1.27
VPS36-201ENST00000378060 ZNF788Q6ZQV5 615 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 LHFPL1Q86WI0 220 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 STPG3Q8N7X2 389 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 OR10S1Q8NGN2 331 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 SPTBN1Q01082 2364 aaKnown RBP7.11□□□□□ -1.27
VPS36-201ENST00000378060 MDC1Q14676 2089 aaKnown RBP7.11□□□□□ -1.27
VPS36-201ENST00000378060 GAGE10A6NGK3 116 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 F2RL2O00254 374 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 RPL7P18124 248 aaKnown RBP7.11□□□□□ -1.27
VPS36-201ENST00000378060 CEBPDP49716 269 aaPredicted RBP7.11□□□□□ -1.27
VPS36-201ENST00000378060 PPP1R32Q7Z5V6 425 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 TMEM186Q96B77 213 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 TMEM70Q9BUB7 260 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 IL36BQ9NZH7 164 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 C12orf77C9JDV5 145 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 UBE2CO00762 179 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.11□□□□□ -1.27
VPS36-201ENST00000378060 OR4A5Q8NH83 315 aa7.11□□□□□ -1.27
VPS36-201ENST00000378060 TRAV30A0A087WSZ9 112 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 TMSB15BA0A087X1C1 80 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 LDLRAD4O15165 306 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 SSTR5P35346 364 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 TMEM177Q53S58 311 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 CENPWQ5EE01 88 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 SPANXN1Q5VSR9 72 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 DGAT2L7PQ6IED9 249 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 OR4A47Q6IF82 309 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 FAM166AQ6J272 317 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 Q6ZT83 130 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 IMMP1LQ96LU5 166 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 PMCHL2Q9BQD1 86 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 BTF3P20290 206 aaKnown RBP7.1□□□□□ -1.27
VPS36-201ENST00000378060 CKS2P33552 79 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 OR10AG1Q8NH19 301 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 REG4Q9BYZ8 158 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 A0A1B0GV90 55 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 GRIFINA4D1Z8 144 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 DPRXA6NFQ7 191 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 LINC00587B1AMM8 73 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 GDF9O60383 454 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 CBLN1P23435 193 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 FOXC1Q12948 553 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 ICAM4Q14773 271 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 FXYD3Q14802 87 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 KIAA1644Q3SXP7 199 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 GLRX5Q86SX6 157 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 ZNF441Q8N8Z8 693 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 OR9G1Q8NH87 305 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 CLEC5AQ9NY25 188 aa7.1□□□□□ -1.27
VPS36-201ENST00000378060 TMEM238LA0A1B0GVL6 79 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 A6NJY4 79 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 IL6RP08887 468 aaPredicted RBP7.09□□□□□ -1.27
VPS36-201ENST00000378060 CD40P25942 277 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 DLX1P56177 255 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 TAS2R60P59551 318 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 CDCP2Q5VXM1 449 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 OSR1Q8TAX0 266 aaPredicted RBP7.09□□□□□ -1.27
VPS36-201ENST00000378060 TMEM242Q9NWH2 141 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 A0A087WV48 116 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 A0A1W2PRD5 423 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 A0A1W2PRF3 423 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 A0A1W2PRM7 423 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 C5orf52A6NGY3 159 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 SLC25A17O43808 307 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 LIPFP07098 398 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 SOD3P08294 240 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 FABP2P12104 132 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 PSMB2P49721 201 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 SRSF4Q08170 494 aaKnown RBP7.09□□□□□ -1.27
VPS36-201ENST00000378060 HCP5Q6MZN7 132 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms