RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 ANKRD12Q6UB98 2062 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 KLF5Q13887 457 aaPredicted RBP4.14□□□□□ -1.75
PCDH9-201ENST00000377861 TRBV7-1A0A0A6YYK4 115 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 ELLP55199 621 aaPredicted RBP4.14□□□□□ -1.75
PCDH9-201ENST00000377861 NUTF2P61970 127 aaKnown RBP4.14□□□□□ -1.75
PCDH9-201ENST00000377861 OR10AC1Q8NH08 325 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 RAB37Q96AX2 223 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 EAF1Q96JC9 268 aaPredicted RBP4.14□□□□□ -1.75
PCDH9-201ENST00000377861 SSTR5P35346 364 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 NABP1Q96AH0 204 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 GZMBP10144 247 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 IGFBPL1Q8WX77 278 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 METTL26Q96S19 204 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 HAX1O00165 279 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 OR8B3Q8NGG8 313 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 OR8B2Q96RD0 313 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 CHD4Q14839 1912 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 S100A4P26447 101 aaKnown RBP4.14□□□□□ -1.75
PCDH9-201ENST00000377861 HOXA4Q00056 320 aaPredicted RBP4.14□□□□□ -1.75
PCDH9-201ENST00000377861 ISOC2Q96AB3 205 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 RBAKDNA6NC62 111 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 BLNKQ8WV28 456 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 ENSAO43768 121 aaKnown RBP4.14□□□□□ -1.75
PCDH9-201ENST00000377861 LHX2P50458 406 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 TMEM167AQ8TBQ9 72 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 TTTY12Q9BZ98 90 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 PHIPQ8WWQ0 1821 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 GFI1Q99684 422 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 MRPL18Q9H0U6 180 aaKnown RBP4.14□□□□□ -1.75
PCDH9-201ENST00000377861 SRRM5B3KS81 715 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 RPL23P62829 140 aaKnown RBP4.14□□□□□ -1.75
PCDH9-201ENST00000377861 OR10W1Q8NGF6 305 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 SIGLEC12Q96PQ1 595 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 SMIM27A0A1W2PRY6 76 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 OR2W5A6NFC9 320 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 IGHV1-24A0A0C4DH33 117 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 A1L4Q6 167 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 SNURFLB1AK76 121 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 CLCF1Q9UBD9 225 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 IL36RNQ9UBH0 155 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 PRSS41Q7RTY9 318 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 ZNF785A8K8V0 405 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 TMEM52Q8NDY8 209 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 DUTP33316 252 aaKnown RBP4.14□□□□□ -1.75
PCDH9-201ENST00000377861 ZNF818PQ6ZRF7 136 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 C12orf77C9JDV5 145 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 GLCCI1Q86VQ1 547 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 TTC9CQ8N5M4 171 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 RPP21Q9H633 154 aaKnown RBP4.13□□□□□ -1.75
PCDH9-201ENST00000377861 YAE1D1Q9NRH1 226 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 PLP1P60201 277 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 STRCQ7RTU9 1775 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 C2CD4DB7Z1M9 353 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 ACTL10Q5JWF8 245 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 DLX1P56177 255 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 C16orf82Q7Z2V1 217 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 PMP22Q01453 160 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 PAX2Q02962 417 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 S100A7L2Q5SY68 101 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 GLMPQ8WWB7 406 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 SRSF9Q13242 221 aaKnown RBP eCLIP4.13□□□□□ -1.75
PCDH9-201ENST00000377861 PGPA6NDG6 321 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 CXCL1P09341 107 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 LYG1Q8N1E2 194 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 NRN1Q9NPD7 142 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 TOMM40O96008 361 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 SLC35B1P78383 322 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 CD69Q07108 199 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 METTL27Q8N6F8 245 aaPredicted RBP4.13□□□□□ -1.75
PCDH9-201ENST00000377861 WFDC6Q9BQY6 131 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 RFNGQ9Y644 331 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 CD3EP07766 207 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 SPACA5Q96QH8 159 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 IER3P46695 156 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 SIGMAR1Q99720 223 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 GPR183P32249 361 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 PIGYQ3MUY2 71 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 TCF21O43680 179 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 OR2J3O76001 311 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 MEOX1P50221 254 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 PEAR1Q5VY43 1037 aaPredicted RBP4.13□□□□□ -1.75
PCDH9-201ENST00000377861 TMEM189A5PLL7 270 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.13□□□□□ -1.75
PCDH9-201ENST00000377861 NPPCP23582 126 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 ASCL3Q9NQ33 180 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 ZNF25P17030 456 aaPredicted RBP4.13□□□□□ -1.75
PCDH9-201ENST00000377861 SPRED2Q7Z698 418 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 PLA2G2FQ9BZM2 168 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 RPH3ALQ9UNE2 315 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.13□□□□□ -1.75
PCDH9-201ENST00000377861 PEX7O00628 323 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 RPL27AP46776 148 aaKnown RBP4.13□□□□□ -1.75
PCDH9-201ENST00000377861 PIK3CD-AS1Q5SR53 167 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 H3BUA1 57 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 PIFOQ8TCI5 191 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 K7EP13 123 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 EFNA4P52798 201 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 SNRPD3P62318 126 aaKnown RBP4.13□□□□□ -1.75
PCDH9-201ENST00000377861 M0R1W7 72 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 ARL14EPLP0DKL9 152 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms