RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 C15orf32Q32M92 178 aa8.88□□□□□ -0.99
SMARCE1-203ENST00000377808 LPCAT3Q6P1A2 487 aa8.88□□□□□ -0.99
SMARCE1-203ENST00000377808 ZNF343Q6P1L6 599 aa8.88□□□□□ -0.99
SMARCE1-203ENST00000377808 NECAP1Q8NC96 275 aa8.88□□□□□ -0.99
SMARCE1-203ENST00000377808 OR52I2Q8NH67 350 aa8.88□□□□□ -0.99
SMARCE1-203ENST00000377808 HINT2Q9BX68 163 aa8.88□□□□□ -0.99
SMARCE1-203ENST00000377808 PLEKHA2Q9HB19 425 aa8.88□□□□□ -0.99
SMARCE1-203ENST00000377808 COMMD9Q9P000 198 aa8.88□□□□□ -0.99
SMARCE1-203ENST00000377808 FBXL7Q9UJT9 491 aa8.88□□□□□ -0.99
SMARCE1-203ENST00000377808 TNCP24821 2201 aa8.87□□□□□ -0.99
SMARCE1-203ENST00000377808 MARCH11A6NNE9 402 aa8.87□□□□□ -0.99
SMARCE1-203ENST00000377808 NPIPB5A8MRT5 1133 aa8.87□□□□□ -0.99
SMARCE1-203ENST00000377808 UPK2O00526 184 aa8.87□□□□□ -0.99
SMARCE1-203ENST00000377808 KRASP01116 189 aa8.87□□□□□ -0.99
SMARCE1-203ENST00000377808 ZNF735P0CB33 412 aa8.87□□□□□ -0.99
SMARCE1-203ENST00000377808 GP9P14770 177 aa8.87□□□□□ -0.99
SMARCE1-203ENST00000377808 F2RP25116 425 aa8.87□□□□□ -0.99
SMARCE1-203ENST00000377808 PSMB6P28072 239 aa8.87□□□□□ -0.99
SMARCE1-203ENST00000377808 G6PCP35575 357 aa8.87□□□□□ -0.99
SMARCE1-203ENST00000377808 RNASE10Q5GAN6 216 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-203ENST00000377808 TBC1D26Q86UD7 250 aa8.87□□□□□ -0.99
SMARCE1-203ENST00000377808 LAX1Q8IWV1 398 aa8.87□□□□□ -0.99
SMARCE1-203ENST00000377808 SLC38A6Q8IZM9 456 aa8.87□□□□□ -0.99
SMARCE1-203ENST00000377808 OR9G4Q8NGQ1 327 aa8.87□□□□□ -0.99
SMARCE1-203ENST00000377808 RAB2BQ8WUD1 216 aa8.87□□□□□ -0.99
SMARCE1-203ENST00000377808 FCAMRQ8WWV6 532 aa8.87□□□□□ -0.99
SMARCE1-203ENST00000377808 DGCR14Q96DF8 476 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-203ENST00000377808 B9D2Q9BPU9 175 aa8.87□□□□□ -0.99
SMARCE1-203ENST00000377808 SLC2A9Q9NRM0 540 aa8.87□□□□□ -0.99
SMARCE1-203ENST00000377808 KLK11Q9UBX7 282 aa8.87□□□□□ -0.99
SMARCE1-203ENST00000377808 S4R3C0 116 aa8.87□□□□□ -0.99
SMARCE1-203ENST00000377808 TRBV9A0A0B4J1U6 114 aa8.86□□□□□ -0.99
SMARCE1-203ENST00000377808 A0A1B0GW64 132 aa8.86□□□□□ -0.99
SMARCE1-203ENST00000377808 PPP5D1E7EU14 171 aa8.86□□□□□ -0.99
SMARCE1-203ENST00000377808 CD3DP04234 171 aa8.86□□□□□ -0.99
SMARCE1-203ENST00000377808 PPP5CP53041 499 aa8.86□□□□□ -0.99
SMARCE1-203ENST00000377808 KLF5Q13887 457 aaPredicted RBP8.86□□□□□ -0.99
SMARCE1-203ENST00000377808 VAX1Q5SQQ9 334 aa8.86□□□□□ -0.99
SMARCE1-203ENST00000377808 C11orf87Q6NUJ2 197 aa8.86□□□□□ -0.99
SMARCE1-203ENST00000377808 C15orf40Q8WUR7 153 aa8.86□□□□□ -0.99
SMARCE1-203ENST00000377808 ASCL2Q99929 193 aa8.86□□□□□ -0.99
SMARCE1-203ENST00000377808 QTRT1Q9BXR0 403 aaKnown RBP8.86□□□□□ -0.99
SMARCE1-203ENST00000377808 C6orf62Q9GZU0 229 aaPredicted RBP8.86□□□□□ -0.99
SMARCE1-203ENST00000377808 NSG2Q9Y328 171 aa8.86□□□□□ -0.99
SMARCE1-203ENST00000377808 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.85□□□□□ -0.99
SMARCE1-203ENST00000377808 CCDC160A6NGH7 325 aa8.85□□□□□ -0.99
SMARCE1-203ENST00000377808 BMPR1BO00238 502 aa8.85□□□□□ -0.99
SMARCE1-203ENST00000377808 CTDSP2O14595 271 aa8.85□□□□□ -0.99
SMARCE1-203ENST00000377808 SNAPC5O75971 98 aa8.85□□□□□ -0.99
SMARCE1-203ENST00000377808 NDUFB8O95169 186 aa8.85□□□□□ -0.99
SMARCE1-203ENST00000377808 HIST1H1BP16401 226 aaKnown RBP8.85□□□□□ -0.99
SMARCE1-203ENST00000377808 CTRB1P17538 263 aa8.85□□□□□ -0.99
SMARCE1-203ENST00000377808 RPL5P46777 297 aaKnown RBP8.85□□□□□ -0.99
SMARCE1-203ENST00000377808 MECP2P51608 486 aaKnown RBP8.85□□□□□ -0.99
SMARCE1-203ENST00000377808 OR2B8PP59922 312 aa8.85□□□□□ -0.99
SMARCE1-203ENST00000377808 IL18Q14116 193 aa8.85□□□□□ -0.99
SMARCE1-203ENST00000377808 POU2AF1Q16633 256 aa8.85□□□□□ -0.99
SMARCE1-203ENST00000377808 SCGB2B2Q4G0G5 96 aa8.85□□□□□ -0.99
SMARCE1-203ENST00000377808 CTRB2Q6GPI1 263 aa8.85□□□□□ -0.99
SMARCE1-203ENST00000377808 EEF1AKMT3Q96AZ1 226 aa8.85□□□□□ -0.99
SMARCE1-203ENST00000377808 DIRAS2Q96HU8 199 aa8.85□□□□□ -0.99
SMARCE1-203ENST00000377808 ABHD1Q96SE0 405 aa8.85□□□□□ -0.99
SMARCE1-203ENST00000377808 MIXL1Q9H2W2 232 aa8.85□□□□□ -0.99
SMARCE1-203ENST00000377808 PEMTQ9UBM1 199 aa8.85□□□□□ -0.99
SMARCE1-203ENST00000377808 OR51B2Q9Y5P1 312 aa8.85□□□□□ -0.99
SMARCE1-203ENST00000377808 SMAD5-AS1Q9Y6J3 95 aa8.85□□□□□ -0.99
SMARCE1-203ENST00000377808 CGB1A6NKQ9 187 aa8.84□□□□□ -0.99
SMARCE1-203ENST00000377808 HLA-AP01891 365 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-203ENST00000377808 CRYGCP07315 174 aa8.84□□□□□ -0.99
SMARCE1-203ENST00000377808 TRAPPC2P0DI81 140 aa8.84□□□□□ -0.99
SMARCE1-203ENST00000377808 TRAPPC2BP0DI82 140 aa8.84□□□□□ -0.99
SMARCE1-203ENST00000377808 PI3P19957 117 aa8.84□□□□□ -0.99
SMARCE1-203ENST00000377808 ARL3P36405 182 aa8.84□□□□□ -0.99
SMARCE1-203ENST00000377808 TMBIM6P55061 237 aa8.84□□□□□ -0.99
SMARCE1-203ENST00000377808 TAS2R19P59542 299 aa8.84□□□□□ -0.99
SMARCE1-203ENST00000377808 ZNF585BQ52M93 769 aa8.84□□□□□ -0.99
SMARCE1-203ENST00000377808 CLEC19AQ6UXS0 136 aa8.84□□□□□ -0.99
SMARCE1-203ENST00000377808 OR10W1Q8NGF6 305 aa8.84□□□□□ -0.99
SMARCE1-203ENST00000377808 OR1L8Q8NGR8 309 aa8.84□□□□□ -0.99
SMARCE1-203ENST00000377808 ZC4H2Q9NQZ6 224 aa8.84□□□□□ -0.99
SMARCE1-203ENST00000377808 CCDC59Q9P031 241 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-203ENST00000377808 MTFP1Q9UDX5 166 aa8.84□□□□□ -0.99
SMARCE1-203ENST00000377808 LSM4Q9Y4Z0 139 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-203ENST00000377808 TEX50A0A1B0GTY4 177 aa8.83□□□□□ -1
SMARCE1-203ENST00000377808 GABARAPH6UMI1 98 aa8.83□□□□□ -1
SMARCE1-203ENST00000377808 CYB5BO43169 146 aa8.83□□□□□ -1
SMARCE1-203ENST00000377808 GGCTO75223 188 aaKnown RBP8.83□□□□□ -1
SMARCE1-203ENST00000377808 RAB3DO95716 219 aa8.83□□□□□ -1
SMARCE1-203ENST00000377808 SERPINE2P07093 398 aa8.83□□□□□ -1
SMARCE1-203ENST00000377808 OR13C7P0DN81 318 aa8.83□□□□□ -1
SMARCE1-203ENST00000377808 TBPP20226 339 aa8.83□□□□□ -1
SMARCE1-203ENST00000377808 UCP3P55916 312 aa8.83□□□□□ -1
SMARCE1-203ENST00000377808 PIGPP57054 158 aa8.83□□□□□ -1
SMARCE1-203ENST00000377808 FAM209BQ5JX69 171 aa8.83□□□□□ -1
SMARCE1-203ENST00000377808 FAAP20Q6NZ36 180 aa8.83□□□□□ -1
SMARCE1-203ENST00000377808 H2BFWTQ7Z2G1 175 aa8.83□□□□□ -1
SMARCE1-203ENST00000377808 TMEM229BQ8NBD8 167 aa8.83□□□□□ -1
SMARCE1-203ENST00000377808 OR4D10Q8NGI6 311 aa8.83□□□□□ -1
SMARCE1-203ENST00000377808 OR4A16Q8NH70 328 aa8.83□□□□□ -1
SMARCE1-203ENST00000377808 DYNC2LI1Q8TCX1 351 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms