RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 TNFAIP6P98066 277 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 FOXL1Q12952 345 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 TEX36Q5VZQ5 186 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 CST9LP1Q5W188 147 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 KCNIP4Q6PIL6 250 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 VHLLQ6RSH7 139 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 C22orf34Q6ZV56 151 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 TMEM144Q7Z5S9 345 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 ZCCHC14Q8WYQ9 949 aaKnown RBP9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 PACRGQ96M98 296 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 ZNF257Q9Y2Q1 563 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 TET2Q6N021 2002 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 A0A1W2PPQ1 181 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 A8MXE2 369 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 SELENOVP59797 346 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 UBE2G2P60604 165 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 PRR20EP86478 221 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 PRR20CP86479 221 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 PRR20DP86480 221 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 PRR20BP86481 221 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 PRR20AP86496 221 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 FAM209BQ5JX69 171 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 ALKBH2Q6NS38 261 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 DUX4L9Q6RFH8 374 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 TEPPQ6URK8 271 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 NUP37Q8NFH4 326 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 OR1P1Q8NH06 330 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 NEUROG1Q92886 237 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 BTF3L4Q96K17 158 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 TMEM204Q9BSN7 226 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 DERL1Q9BUN8 251 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 OTOGLQ3ZCN5 2332 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 DSCAMO60469 2012 aa9.63□□□□□ -0.87
TNFRSF9-201ENST00000377507 DSCAML1Q8TD84 2053 aa9.63□□□□□ -0.87
TNFRSF9-201ENST00000377507 TRBV20OR9-2A0A075B6H5 130 aa9.63□□□□□ -0.87
TNFRSF9-201ENST00000377507 CA2P00918 260 aa9.63□□□□□ -0.87
TNFRSF9-201ENST00000377507 CRYABP02511 175 aaKnown RBP9.63□□□□□ -0.87
TNFRSF9-201ENST00000377507 CD40P25942 277 aa9.63□□□□□ -0.87
TNFRSF9-201ENST00000377507 NUBP1P53384 320 aa9.63□□□□□ -0.87
TNFRSF9-201ENST00000377507 ATP5IP56385 69 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF9-201ENST00000377507 EFNB3Q15768 340 aa9.63□□□□□ -0.87
TNFRSF9-201ENST00000377507 SLC25A48Q6ZT89 311 aaKnown RBP9.63□□□□□ -0.87
TNFRSF9-201ENST00000377507 LYG1Q8N1E2 194 aa9.63□□□□□ -0.87
TNFRSF9-201ENST00000377507 RBMXL3Q8N7X1 1067 aaKnown RBP9.63□□□□□ -0.87
TNFRSF9-201ENST00000377507 STPG3Q8N7X2 389 aa9.63□□□□□ -0.87
TNFRSF9-201ENST00000377507 PFDN5Q99471 154 aa9.63□□□□□ -0.87
TNFRSF9-201ENST00000377507 RPUSD1Q9UJJ7 312 aaKnown RBP9.63□□□□□ -0.87
TNFRSF9-201ENST00000377507 PRNDQ9UKY0 176 aa9.63□□□□□ -0.87
TNFRSF9-201ENST00000377507 DVL1O14640 695 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 GATCO43716 136 aaKnown RBP9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 AMBPP02760 352 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 CT45A6P0DMU7 189 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 CT45A5P0DMU8 189 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 CT45A7P0DMV0 189 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 CHRNA7P36544 502 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 RPL15P61313 204 aaKnown RBP9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 RHOBP62745 196 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 RAB31Q13636 194 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 JOSD1Q15040 202 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 KRTCAP3Q53RY4 240 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 ZNF114Q8NC26 417 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 OR5R1Q8NH85 324 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 FAM57AQ8TBR7 257 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 SEPSECSQ9HD40 501 aaKnown RBP9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 ZFHX4Q86UP3 3567 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 XKRY2A2RUG3 117 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 UPK2O00526 184 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 MMP23AO75900 390 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 LINC00869P0C866 280 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 TNFSF4P23510 183 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 GCHFRP30047 84 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 PRCDQ00LT1 54 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 FAM27E3Q08E93 113 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 SSMEM1Q8WWF3 244 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 C11orf52Q96A22 123 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 SFRP2Q96HF1 295 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 CCL13Q99616 98 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 ENY2Q9NPA8 101 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 YTHDF2Q9Y5A9 579 aaKnown RBP9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 OR51B2Q9Y5P1 312 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 ARL2-SNX15V9GYD0 113 aa9.62□□□□□ -0.87
TNFRSF9-201ENST00000377507 TRBV23-1A0A0A0MS06 115 aa9.61□□□□□ -0.87
TNFRSF9-201ENST00000377507 C1QTNF9P0C862 333 aa9.61□□□□□ -0.87
TNFRSF9-201ENST00000377507 IL3RAP26951 378 aa9.61□□□□□ -0.87
TNFRSF9-201ENST00000377507 CLEC12BQ2HXU8 276 aa9.61□□□□□ -0.87
TNFRSF9-201ENST00000377507 FAM78BQ5VT40 261 aa9.61□□□□□ -0.87
TNFRSF9-201ENST00000377507 FAM216BQ8N7L0 139 aa9.61□□□□□ -0.87
TNFRSF9-201ENST00000377507 SLC45A2Q9UMX9 530 aa9.61□□□□□ -0.87
TNFRSF9-201ENST00000377507 FUT9Q9Y231 359 aa9.61□□□□□ -0.87
TNFRSF9-201ENST00000377507 LY96Q9Y6Y9 160 aa9.61□□□□□ -0.87
TNFRSF9-201ENST00000377507 CACNA1HO95180 2353 aa9.61□□□□□ -0.87
TNFRSF9-201ENST00000377507 SRRM4A7MD48 611 aaKnown RBP9.6□□□□□ -0.87
TNFRSF9-201ENST00000377507 J3QR06 171 aa9.6□□□□□ -0.87
TNFRSF9-201ENST00000377507 K7EM74 188 aa9.6□□□□□ -0.87
TNFRSF9-201ENST00000377507 AREGP15514 252 aa9.6□□□□□ -0.87
TNFRSF9-201ENST00000377507 PAX1P15863 534 aa9.6□□□□□ -0.87
TNFRSF9-201ENST00000377507 BMP5P22003 454 aa9.6□□□□□ -0.87
TNFRSF9-201ENST00000377507 CCKARP32238 428 aa9.6□□□□□ -0.87
TNFRSF9-201ENST00000377507 GAMTQ14353 236 aa9.6□□□□□ -0.87
TNFRSF9-201ENST00000377507 ZNF833PQ6ZTB9 187 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms