RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 ZNF726P1Q15940 193 aa13□□□□□ -0.33
FXN-201ENST00000377270 CLEC7AQ9BXN2 247 aa13□□□□□ -0.33
FXN-201ENST00000377270 SERTAD4Q9NUC0 356 aa13□□□□□ -0.33
FXN-201ENST00000377270 C3orf85A0A1B0GTC6 90 aa13□□□□□ -0.33
FXN-201ENST00000377270 B5MCH6 92 aa13□□□□□ -0.33
FXN-201ENST00000377270 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13□□□□□ -0.33
FXN-201ENST00000377270 SLC33A1O00400 549 aaPredicted RBP13□□□□□ -0.33
FXN-201ENST00000377270 MEF2BQ02080 365 aaPredicted RBP13□□□□□ -0.33
FXN-201ENST00000377270 TGFBR3Q03167 851 aa13□□□□□ -0.33
FXN-201ENST00000377270 SRYQ05066 204 aa13□□□□□ -0.33
FXN-201ENST00000377270 GAGE5Q13069 117 aa13□□□□□ -0.33
FXN-201ENST00000377270 GAGE6Q13070 117 aa13□□□□□ -0.33
FXN-201ENST00000377270 OR2H1Q9GZK4 316 aa13□□□□□ -0.33
FXN-201ENST00000377270 GNB4Q9HAV0 340 aa13□□□□□ -0.33
FXN-201ENST00000377270 JKAMPQ9P055 326 aa13□□□□□ -0.33
FXN-201ENST00000377270 A0A1W2PPV4 95 aa12.99□□□□□ -0.33
FXN-201ENST00000377270 PSMB11A5LHX3 300 aa12.99□□□□□ -0.33
FXN-201ENST00000377270 H0YJW9 148 aa12.99□□□□□ -0.33
FXN-201ENST00000377270 CGAP01215 116 aa12.99□□□□□ -0.33
FXN-201ENST00000377270 VSIRQ9H7M9 311 aa12.99□□□□□ -0.33
FXN-201ENST00000377270 A0A1W2PS18 150 aa12.99□□□□□ -0.33
FXN-201ENST00000377270 NRASP01111 189 aa12.99□□□□□ -0.33
FXN-201ENST00000377270 KRASP01116 189 aa12.99□□□□□ -0.33
FXN-201ENST00000377270 GPM6AP51674 278 aa12.99□□□□□ -0.33
FXN-201ENST00000377270 ZNF562Q6V9R5 426 aa12.99□□□□□ -0.33
FXN-201ENST00000377270 DOLPP1Q86YN1 238 aa12.99□□□□□ -0.33
FXN-201ENST00000377270 OR2K2Q8NGT1 345 aa12.99□□□□□ -0.33
FXN-201ENST00000377270 BORCS7Q96B45 105 aa12.99□□□□□ -0.33
FXN-201ENST00000377270 KCNS1Q96KK3 526 aa12.99□□□□□ -0.33
FXN-201ENST00000377270 NAA38Q9BRA0 125 aaKnown RBP12.99□□□□□ -0.33
FXN-201ENST00000377270 TMEM222Q9H0R3 208 aa12.99□□□□□ -0.33
FXN-201ENST00000377270 IGKV1-27A0A075B6S5 117 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 hCG_38984A0A1B0GV85 526 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 A0A1W2PNU3 283 aaPredicted RBP12.98□□□□□ -0.33
FXN-201ENST00000377270 SNAI2O43623 268 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 PCBD1P61457 104 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 ABHD17BQ5VST6 288 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 ZNF841Q6ZN19 808 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 ZNF695Q8IW36 515 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 Q96M66 194 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 HES7Q9BYE0 225 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 ST20Q9HBF5 79 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 TNRC6AQ8NDV7 1962 aaKnown RBP12.98□□□□□ -0.33
FXN-201ENST00000377270 KNTC1P50748 2209 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 ANKRD30BLA7E2S9 258 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 ADAM20O43506 726 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 CHST1O43916 411 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 ZNF737O75373 536 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 NEURL1O76050 574 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 SP9P0CG40 484 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 SLC25A6P12236 298 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 CA7P43166 264 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 ID3Q02535 119 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 HIST1H1AQ02539 215 aaPredicted RBP12.98□□□□□ -0.33
FXN-201ENST00000377270 FOXL1Q12952 345 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 ACSF3Q4G176 576 aaPredicted RBP12.98□□□□□ -0.33
FXN-201ENST00000377270 SGMS2Q8NHU3 365 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 NINJ1Q92982 152 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 BORCS8Q96FH0 119 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 FAM173AQ9BQD7 235 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 ERG28Q9UKR5 140 aa12.98□□□□□ -0.33
FXN-201ENST00000377270 KRTAP27-1Q3LI81 207 aa12.97□□□□□ -0.33
FXN-201ENST00000377270 Q56UQ5 140 aa12.97□□□□□ -0.33
FXN-201ENST00000377270 PRR31Q5SQ13 230 aa12.97□□□□□ -0.33
FXN-201ENST00000377270 FAM19A2Q8N3H0 131 aa12.97□□□□□ -0.33
FXN-201ENST00000377270 GMPPAQ96IJ6 420 aaPredicted RBP12.97□□□□□ -0.33
FXN-201ENST00000377270 BDP1A6H8Y1 2624 aa12.97□□□□□ -0.33
FXN-201ENST00000377270 DOCK11Q5JSL3 2073 aa12.97□□□□□ -0.33
FXN-201ENST00000377270 H3BUT2 72 aa12.97□□□□□ -0.33
FXN-201ENST00000377270 MRPL33O75394 65 aaKnown RBP12.97□□□□□ -0.33
FXN-201ENST00000377270 ZNF324O75467 553 aaPredicted RBP12.97□□□□□ -0.33
FXN-201ENST00000377270 IGFBP2P18065 325 aa12.97□□□□□ -0.33
FXN-201ENST00000377270 CFHR2P36980 270 aa12.97□□□□□ -0.33
FXN-201ENST00000377270 NPBWR2P48146 333 aa12.97□□□□□ -0.33
FXN-201ENST00000377270 HLA-DRB5Q30154 266 aa12.97□□□□□ -0.33
FXN-201ENST00000377270 ALKBH6Q3KRA9 238 aa12.97□□□□□ -0.33
FXN-201ENST00000377270 TUSC5Q8IXB3 177 aa12.97□□□□□ -0.33
FXN-201ENST00000377270 ZNF418Q8TF45 676 aaPredicted RBP12.97□□□□□ -0.33
FXN-201ENST00000377270 RCHY1Q96PM5 261 aa12.97□□□□□ -0.33
FXN-201ENST00000377270 GP6Q9HCN6 339 aa12.97□□□□□ -0.33
FXN-201ENST00000377270 UBE2J1Q9Y385 318 aaPredicted RBP12.97□□□□□ -0.33
FXN-201ENST00000377270 SERPINE2P07093 398 aa12.96□□□□□ -0.33
FXN-201ENST00000377270 LINC00869P0C866 280 aa12.96□□□□□ -0.33
FXN-201ENST00000377270 SSTR5P35346 364 aa12.96□□□□□ -0.33
FXN-201ENST00000377270 GPR12P47775 334 aa12.96□□□□□ -0.33
FXN-201ENST00000377270 HERV-K104P61576 105 aa12.96□□□□□ -0.33
FXN-201ENST00000377270 C19orf35Q6ZS72 473 aa12.96□□□□□ -0.33
FXN-201ENST00000377270 ZNF286AQ9HBT8 521 aa12.96□□□□□ -0.33
FXN-201ENST00000377270 M0QXV9 152 aa12.96□□□□□ -0.33
FXN-201ENST00000377270 SCGB1C1Q8TD33 95 aa12.96□□□□□ -0.33
FXN-201ENST00000377270 TRAPPC2LQ9UL33 140 aa12.96□□□□□ -0.33
FXN-201ENST00000377270 TMEM189A5PLL7 270 aa12.95□□□□□ -0.34
FXN-201ENST00000377270 C9orf118A6NHY6 69 aa12.95□□□□□ -0.34
FXN-201ENST00000377270 KIAA1324LA8MWY0 1029 aaPredicted RBP12.95□□□□□ -0.34
FXN-201ENST00000377270 TMEM250H0YL14 139 aa12.95□□□□□ -0.34
FXN-201ENST00000377270 CD59P13987 128 aa12.95□□□□□ -0.34
FXN-201ENST00000377270 MDH2P40926 338 aaKnown RBP12.95□□□□□ -0.34
FXN-201ENST00000377270 PAX9P55771 341 aa12.95□□□□□ -0.34
FXN-201ENST00000377270 TESK1Q15569 626 aa12.95□□□□□ -0.34
FXN-201ENST00000377270 LINC00696Q6ZRV3 163 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms