RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 TNFAIP6P98066 277 aaPredicted RBP13.38□□□□□ -0.27
TRIM27-202ENST00000377199 C17orf58Q2M2W7 97 aa13.38□□□□□ -0.27
TRIM27-202ENST00000377199 TCF23Q7RTU1 214 aa13.38□□□□□ -0.27
TRIM27-202ENST00000377199 OR1P1Q8NH06 330 aa13.38□□□□□ -0.27
TRIM27-202ENST00000377199 OR4S2Q8NH73 311 aa13.38□□□□□ -0.27
TRIM27-202ENST00000377199 LRFN3Q9BTN0 628 aa13.38□□□□□ -0.27
TRIM27-202ENST00000377199 FAM215AQ9Y5M1 114 aa13.38□□□□□ -0.27
TRIM27-202ENST00000377199 ZNF292O60281 2723 aa13.38□□□□□ -0.27
TRIM27-202ENST00000377199 TRBV20OR9-2A0A075B6H5 130 aa13.38□□□□□ -0.27
TRIM27-202ENST00000377199 ARSJQ5FYB0 599 aaPredicted RBP13.38□□□□□ -0.27
TRIM27-202ENST00000377199 IGFL2Q6UWQ7 119 aa13.38□□□□□ -0.27
TRIM27-202ENST00000377199 TRGV10A0A0A0MS01 117 aa13.37□□□□□ -0.27
TRIM27-202ENST00000377199 TMPRSS2O15393 492 aa13.37□□□□□ -0.27
TRIM27-202ENST00000377199 RBFOX2O43251 390 aaKnown RBP eCLIP13.37□□□□□ -0.275e-10■■□□□ 13.8
TRIM27-202ENST00000377199 CA2P00918 260 aa13.37□□□□□ -0.27
TRIM27-202ENST00000377199 AMBPP02760 352 aa13.37□□□□□ -0.27
TRIM27-202ENST00000377199 IGKV1-16P04430 117 aa13.37□□□□□ -0.27
TRIM27-202ENST00000377199 HIST1H1BP16401 226 aaKnown RBP13.37□□□□□ -0.27
TRIM27-202ENST00000377199 NPY1RP25929 384 aa13.37□□□□□ -0.27
TRIM27-202ENST00000377199 REG1BP48304 166 aa13.37□□□□□ -0.27
TRIM27-202ENST00000377199 TMEM183AQ8IXX5 376 aa13.37□□□□□ -0.27
TRIM27-202ENST00000377199 IGFBP2P18065 325 aa13.37□□□□□ -0.27
TRIM27-202ENST00000377199 PMS2P11Q13670 270 aa13.37□□□□□ -0.27
TRIM27-202ENST00000377199 PIP4P1Q86T03 277 aa13.37□□□□□ -0.27
TRIM27-202ENST00000377199 STPG3Q8N7X2 389 aa13.37□□□□□ -0.27
TRIM27-202ENST00000377199 SLC24A4Q8NFF2 622 aa13.37□□□□□ -0.27
TRIM27-202ENST00000377199 OR4P4Q8NGL7 312 aa13.37□□□□□ -0.27
TRIM27-202ENST00000377199 FAM216AQ8WUB2 273 aa13.37□□□□□ -0.27
TRIM27-202ENST00000377199 GCM1Q9NP62 436 aa13.37□□□□□ -0.27
TRIM27-202ENST00000377199 IL6RP08887 468 aaPredicted RBP13.36□□□□□ -0.27
TRIM27-202ENST00000377199 IL3RAP26951 378 aa13.36□□□□□ -0.27
TRIM27-202ENST00000377199 SGMS2Q8NHU3 365 aa13.36□□□□□ -0.27
TRIM27-202ENST00000377199 TP53TG5Q9Y2B4 290 aa13.36□□□□□ -0.27
TRIM27-202ENST00000377199 YTHDF2Q9Y5A9 579 aaKnown RBP13.36□□□□□ -0.27
TRIM27-202ENST00000377199 ZGRF1Q86YA3 2104 aa13.36□□□□□ -0.27
TRIM27-202ENST00000377199 BSNQ9UPA5 3926 aa13.36□□□□□ -0.27
TRIM27-202ENST00000377199 F6UZH7 168 aa13.36□□□□□ -0.27
TRIM27-202ENST00000377199 SNRPCP09234 159 aaKnown RBP13.36□□□□□ -0.27
TRIM27-202ENST00000377199 MLANAQ16655 118 aa13.36□□□□□ -0.27
TRIM27-202ENST00000377199 KCNIP4Q6PIL6 250 aa13.36□□□□□ -0.27
TRIM27-202ENST00000377199 ANAPC16Q96DE5 110 aa13.36□□□□□ -0.27
TRIM27-202ENST00000377199 KBTBD11-OT1A0A1B0GTJ5 212 aa13.35□□□□□ -0.27
TRIM27-202ENST00000377199 ZNF729A6NN14 1252 aaPredicted RBP13.35□□□□□ -0.27
TRIM27-202ENST00000377199 PDE6DO43924 150 aa13.35□□□□□ -0.27
TRIM27-202ENST00000377199 GLRXP35754 106 aa13.35□□□□□ -0.27
TRIM27-202ENST00000377199 TIMM23BQ5SRD1 257 aa13.35□□□□□ -0.27
TRIM27-202ENST00000377199 NPVFQ9HCQ7 196 aa13.35□□□□□ -0.27
TRIM27-202ENST00000377199 MBD3L4A6NDZ8 208 aaPredicted RBP13.35□□□□□ -0.27
TRIM27-202ENST00000377199 MBD3L3A6NE82 208 aaPredicted RBP13.35□□□□□ -0.27
TRIM27-202ENST00000377199 MBD3L5A6NJ08 208 aaPredicted RBP13.35□□□□□ -0.27
TRIM27-202ENST00000377199 C15orf61A6NNL5 157 aa13.35□□□□□ -0.27
TRIM27-202ENST00000377199 TGOLN2O43493 480 aa13.35□□□□□ -0.27
TRIM27-202ENST00000377199 OPRK1P41145 380 aa13.35□□□□□ -0.27
TRIM27-202ENST00000377199 NUBP1P53384 320 aa13.35□□□□□ -0.27
TRIM27-202ENST00000377199 SELENOVP59797 346 aa13.35□□□□□ -0.27
TRIM27-202ENST00000377199 MBD3L2Q8NHZ7 208 aaPredicted RBP13.35□□□□□ -0.27
TRIM27-202ENST00000377199 RNF7Q9UBF6 113 aa13.35□□□□□ -0.27
TRIM27-202ENST00000377199 MDFIC2A0A1B0GVS7 189 aa13.35□□□□□ -0.27
TRIM27-202ENST00000377199 F2RL2O00254 374 aa13.35□□□□□ -0.27
TRIM27-202ENST00000377199 SLC17A3O00476 420 aa13.35□□□□□ -0.27
TRIM27-202ENST00000377199 IGHV3-48P01763 117 aa13.35□□□□□ -0.27
TRIM27-202ENST00000377199 TEPPQ6URK8 271 aa13.35□□□□□ -0.27
TRIM27-202ENST00000377199 C1orf159Q96HA4 380 aa13.35□□□□□ -0.27
TRIM27-202ENST00000377199 OR51B2Q9Y5P1 312 aa13.35□□□□□ -0.27
TRIM27-202ENST00000377199 SPINK4O60575 86 aa13.34□□□□□ -0.27
TRIM27-202ENST00000377199 IGHV1-46P01743 117 aa13.34□□□□□ -0.27
TRIM27-202ENST00000377199 EFNB3Q15768 340 aa13.34□□□□□ -0.27
TRIM27-202ENST00000377199 MRPL41Q8IXM3 137 aaKnown RBP13.34□□□□□ -0.27
TRIM27-202ENST00000377199 TRAPPC1Q9Y5R8 145 aa13.34□□□□□ -0.27
TRIM27-202ENST00000377199 APC2O95996 2303 aa13.34□□□□□ -0.27
TRIM27-202ENST00000377199 CXorf1O96002 111 aa13.34□□□□□ -0.27
TRIM27-202ENST00000377199 RPL31P62899 125 aaKnown RBP13.34□□□□□ -0.27
TRIM27-202ENST00000377199 WFDC8Q8IUA0 241 aa13.34□□□□□ -0.27
TRIM27-202ENST00000377199 TUBG2Q9NRH3 451 aa13.34□□□□□ -0.27
TRIM27-202ENST00000377199 KCNIP2Q9NS61 270 aa13.34□□□□□ -0.27
TRIM27-202ENST00000377199 GRIFINA4D1Z8 144 aa13.33□□□□□ -0.28
TRIM27-202ENST00000377199 J3QR06 171 aa13.33□□□□□ -0.28
TRIM27-202ENST00000377199 STAG3L2P0CL84 134 aa13.33□□□□□ -0.28
TRIM27-202ENST00000377199 STAG3L3P0CL85 134 aa13.33□□□□□ -0.28
TRIM27-202ENST00000377199 MIR17HGQ75NE6 70 aa13.33□□□□□ -0.28
TRIM27-202ENST00000377199 OCC1Q8TAD7 63 aa13.33□□□□□ -0.28
TRIM27-202ENST00000377199 DDB2Q92466 427 aa13.33□□□□□ -0.28
TRIM27-202ENST00000377199 SFRP2Q96HF1 295 aa13.33□□□□□ -0.28
TRIM27-202ENST00000377199 PYGO2Q9BRQ0 406 aa13.33□□□□□ -0.28
TRIM27-202ENST00000377199 IDI2-AS1Q9NZ38 188 aa13.33□□□□□ -0.28
TRIM27-202ENST00000377199 PRSS46E5RG02 174 aa13.33□□□□□ -0.28
TRIM27-202ENST00000377199 OR10J4P0C629 311 aa13.33□□□□□ -0.28
TRIM27-202ENST00000377199 RAB7AP51149 207 aa13.33□□□□□ -0.28
TRIM27-202ENST00000377199 HSPE1P61604 102 aaKnown RBP13.33□□□□□ -0.28
TRIM27-202ENST00000377199 OR10W1Q8NGF6 305 aa13.33□□□□□ -0.28
TRIM27-202ENST00000377199 IMMP2LQ96T52 175 aa13.33□□□□□ -0.28
TRIM27-202ENST00000377199 CEP295Q9C0D2 2601 aa13.33□□□□□ -0.28
TRIM27-202ENST00000377199 SRRM4A7MD48 611 aaKnown RBP13.32□□□□□ -0.28
TRIM27-202ENST00000377199 MPDU1O75352 247 aa13.32□□□□□ -0.28
TRIM27-202ENST00000377199 VENTXO95231 258 aa13.32□□□□□ -0.28
TRIM27-202ENST00000377199 LHBP01229 141 aa13.32□□□□□ -0.28
TRIM27-202ENST00000377199 ASPHD1Q5U4P2 390 aa13.32□□□□□ -0.28
TRIM27-202ENST00000377199 DIRC2Q96SL1 478 aa13.32□□□□□ -0.28
TRIM27-202ENST00000377199 KLK10O43240 276 aa13.32□□□□□ -0.28
TRIM27-202ENST00000377199 GZMBP10144 247 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms