RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 Q6ZRM9 215 aa10.14□□□□□ -0.79
VRK3-202ENST00000377011 GCSAMQ8N6F7 178 aa10.14□□□□□ -0.79
VRK3-202ENST00000377011 ZNF645Q8N7E2 425 aa10.14□□□□□ -0.79
VRK3-202ENST00000377011 TIMD4Q96H15 378 aa10.14□□□□□ -0.79
VRK3-202ENST00000377011 RFNGQ9Y644 331 aa10.14□□□□□ -0.79
VRK3-202ENST00000377011 STAB1Q9NY15 2570 aa10.14□□□□□ -0.79
VRK3-202ENST00000377011 IGHV3OR15-7A0A075B7D8 119 aa10.13□□□□□ -0.79
VRK3-202ENST00000377011 SIRPB1O00241 398 aa10.13□□□□□ -0.79
VRK3-202ENST00000377011 LY86O95711 162 aa10.13□□□□□ -0.79
VRK3-202ENST00000377011 TMEM14EPQ6UXP3 125 aa10.13□□□□□ -0.79
VRK3-202ENST00000377011 DRAM1Q8N682 238 aa10.13□□□□□ -0.79
VRK3-202ENST00000377011 Q8TCH9 128 aa10.13□□□□□ -0.79
VRK3-202ENST00000377011 GGACTQ9BVM4 153 aa10.13□□□□□ -0.79
VRK3-202ENST00000377011 WDR61Q9GZS3 305 aaKnown RBP10.13□□□□□ -0.79
VRK3-202ENST00000377011 CTDSP1Q9GZU7 261 aa10.13□□□□□ -0.79
VRK3-202ENST00000377011 PATZ1Q9HBE1 687 aaKnown RBP10.13□□□□□ -0.79
VRK3-202ENST00000377011 TMEM160Q9NX00 188 aa10.13□□□□□ -0.79
VRK3-202ENST00000377011 GAR1Q9NY12 217 aaKnown RBP10.13□□□□□ -0.79
VRK3-202ENST00000377011 CTSZQ9UBR2 303 aa10.13□□□□□ -0.79
VRK3-202ENST00000377011 HSPB7Q9UBY9 170 aa10.13□□□□□ -0.79
VRK3-202ENST00000377011 RBM7Q9Y580 266 aaKnown RBP10.13□□□□□ -0.79
VRK3-202ENST00000377011 TENM1Q9UKZ4 2725 aa10.13□□□□□ -0.79
VRK3-202ENST00000377011 LOC105371242A0A075B767 164 aa10.13□□□□□ -0.79
VRK3-202ENST00000377011 HAND1O96004 215 aa10.13□□□□□ -0.79
VRK3-202ENST00000377011 P0C879 139 aa10.13□□□□□ -0.79
VRK3-202ENST00000377011 RND2P52198 227 aa10.13□□□□□ -0.79
VRK3-202ENST00000377011 PAX5Q02548 391 aa10.13□□□□□ -0.79
VRK3-202ENST00000377011 CATR1Q13166 79 aa10.13□□□□□ -0.79
VRK3-202ENST00000377011 ZNF674Q2M3X9 581 aa10.13□□□□□ -0.79
VRK3-202ENST00000377011 LILRB2Q8N423 598 aa10.13□□□□□ -0.79
VRK3-202ENST00000377011 RPRMQ9NS64 109 aa10.13□□□□□ -0.79
VRK3-202ENST00000377011 VAX2Q9UIW0 290 aa10.13□□□□□ -0.79
VRK3-202ENST00000377011 OOEPA6NGQ2 149 aa10.12□□□□□ -0.79
VRK3-202ENST00000377011 ZNF729A6NN14 1252 aaPredicted RBP10.12□□□□□ -0.79
VRK3-202ENST00000377011 H3BP45 60 aa10.12□□□□□ -0.79
VRK3-202ENST00000377011 TNFRSF13BO14836 293 aaPredicted RBP10.12□□□□□ -0.79
VRK3-202ENST00000377011 NXPH3O95157 252 aa10.12□□□□□ -0.79
VRK3-202ENST00000377011 MBP02144 154 aa10.12□□□□□ -0.79
VRK3-202ENST00000377011 CEACAM6P40199 344 aa10.12□□□□□ -0.79
VRK3-202ENST00000377011 EIF4EBP1Q13541 118 aaPredicted RBP10.12□□□□□ -0.79
VRK3-202ENST00000377011 TMEM155Q4W5P6 130 aa10.12□□□□□ -0.79
VRK3-202ENST00000377011 FAM90A2PQ658T7 463 aa10.12□□□□□ -0.79
VRK3-202ENST00000377011 TRAT1Q6PIZ9 186 aa10.12□□□□□ -0.79
VRK3-202ENST00000377011 HAPLN4Q86UW8 402 aa10.12□□□□□ -0.79
VRK3-202ENST00000377011 Q8WTZ3 238 aa10.12□□□□□ -0.79
VRK3-202ENST00000377011 GALMQ96C23 342 aa10.12□□□□□ -0.79
VRK3-202ENST00000377011 AGMATQ9BSE5 352 aa10.12□□□□□ -0.79
VRK3-202ENST00000377011 DOK5Q9P104 306 aa10.12□□□□□ -0.79
VRK3-202ENST00000377011 OR14J1Q9UGF5 321 aa10.12□□□□□ -0.79
VRK3-202ENST00000377011 CDC42EP3Q9UKI2 254 aa10.12□□□□□ -0.79
VRK3-202ENST00000377011 SOX21Q9Y651 276 aaPredicted RBP10.12□□□□□ -0.79
VRK3-202ENST00000377011 PPIAL4EA0A075B759 164 aa10.11□□□□□ -0.79
VRK3-202ENST00000377011 PPIAL4DF5H284 164 aa10.11□□□□□ -0.79
VRK3-202ENST00000377011 CLDN34H7C241 214 aa10.11□□□□□ -0.79
VRK3-202ENST00000377011 CDIPTO14735 213 aa10.11□□□□□ -0.79
VRK3-202ENST00000377011 SOX15O60248 233 aa10.11□□□□□ -0.79
VRK3-202ENST00000377011 LHBP01229 141 aa10.11□□□□□ -0.79
VRK3-202ENST00000377011 METTL15P1P0C7V9 234 aa10.11□□□□□ -0.79
VRK3-202ENST00000377011 PPIAL4FP0DN26 164 aa10.11□□□□□ -0.79
VRK3-202ENST00000377011 IAPPP10997 89 aa10.11□□□□□ -0.79
VRK3-202ENST00000377011 PAX2Q02962 417 aa10.11□□□□□ -0.79
VRK3-202ENST00000377011 TNFRSF9Q07011 255 aa10.11□□□□□ -0.79
VRK3-202ENST00000377011 SLC38A11Q08AI6 406 aa10.11□□□□□ -0.79
VRK3-202ENST00000377011 KRTAP21-3Q3LHN1 58 aa10.11□□□□□ -0.79
VRK3-202ENST00000377011 FAM209BQ5JX69 171 aa10.11□□□□□ -0.79
VRK3-202ENST00000377011 WDR82Q6UXN9 313 aa10.11□□□□□ -0.79
VRK3-202ENST00000377011 ZNF841Q6ZN19 808 aa10.11□□□□□ -0.79
VRK3-202ENST00000377011 FAM90A1Q86YD7 464 aa10.11□□□□□ -0.79
VRK3-202ENST00000377011 C1orf87Q8N0U7 546 aa10.11□□□□□ -0.79
VRK3-202ENST00000377011 TAF15Q92804 592 aaKnown RBP eCLIP10.11□□□□□ -0.79
VRK3-202ENST00000377011 RCC1LQ96I51 464 aaKnown RBP10.11□□□□□ -0.79
VRK3-202ENST00000377011 CIB3Q96Q77 187 aaPredicted RBP10.11□□□□□ -0.79
VRK3-202ENST00000377011 GNG13Q9P2W3 67 aa10.11□□□□□ -0.79
VRK3-202ENST00000377011 PPIAL4AQ9Y536 164 aa10.11□□□□□ -0.79
VRK3-202ENST00000377011 TRAV20A0A0B4J274 112 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 ZNF727A8MUV8 499 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 IFNL4K9M1U5 179 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 GYPAP02724 150 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 OPN1MWP04001 364 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 OPN1MW2P0DN77 364 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 OPN1MW3P0DN78 364 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 NDUFA6P56556 154 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 ARL16Q0P5N6 197 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 ZNF66Q6ZN08 573 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 LRRC29Q8WV35 223 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 RSG1Q9BU20 258 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 TMEM147Q9BVK8 224 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.1□□□□□ -0.79
VRK3-202ENST00000377011 RNF7Q9UBF6 113 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 TRBV24-1A0A075B6N3 115 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 MAP1LC3B2A6NCE7 125 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 RAB29O14966 203 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 PPP1R2P9O14990 202 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 CXCL1P09341 107 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 SELLP14151 372 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 SRD5A1P18405 259 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 MZT1Q08AG7 82 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 ZNF726P1Q15940 193 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 EDARADDQ8WWZ3 215 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 OR4C12Q96R67 309 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms