RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 TMEM140Q9NV12 185 aa17.06■□□□□ 0.32
SRM-201ENST00000376957 MARCH11A6NNE9 402 aa17.05■□□□□ 0.32
SRM-201ENST00000376957 NPIPB5A8MRT5 1133 aa17.05■□□□□ 0.32
SRM-201ENST00000376957 M0QYG6 137 aa17.05■□□□□ 0.32
SRM-201ENST00000376957 UPK2O00526 184 aa17.05■□□□□ 0.32
SRM-201ENST00000376957 CTDSP2O14595 271 aa17.05■□□□□ 0.32
SRM-201ENST00000376957 S1PR2O95136 353 aa17.05■□□□□ 0.32
SRM-201ENST00000376957 ZNF735P0CB33 412 aa17.05■□□□□ 0.32
SRM-201ENST00000376957 PGAM2P15259 253 aa17.05■□□□□ 0.32
SRM-201ENST00000376957 HIST1H1BP16401 226 aaKnown RBP17.05■□□□□ 0.32
SRM-201ENST00000376957 LPAR6P43657 344 aa17.05■□□□□ 0.32
SRM-201ENST00000376957 PHLDA2Q53GA4 152 aa17.05■□□□□ 0.32
SRM-201ENST00000376957 C10orf55Q5SWW7 151 aa17.05■□□□□ 0.32
SRM-201ENST00000376957 ZNF343Q6P1L6 599 aa17.05■□□□□ 0.32
SRM-201ENST00000376957 HSD17B13Q7Z5P4 300 aaPredicted RBP17.05■□□□□ 0.32
SRM-201ENST00000376957 TMEM229BQ8NBD8 167 aa17.05■□□□□ 0.32
SRM-201ENST00000376957 ISOC1Q96CN7 298 aa17.05■□□□□ 0.32
SRM-201ENST00000376957 SRSF8Q9BRL6 282 aaKnown RBP17.05■□□□□ 0.32
SRM-201ENST00000376957 TNCP24821 2201 aa17.04■□□□□ 0.32
SRM-201ENST00000376957 HMX3A6NHT5 357 aa17.04■□□□□ 0.32
SRM-201ENST00000376957 CD3DP04234 171 aa17.04■□□□□ 0.32
SRM-201ENST00000376957 TSC22D3Q99576 134 aa17.04■□□□□ 0.32
SRM-201ENST00000376957 FKBP11Q9NYL4 201 aa17.04■□□□□ 0.32
SRM-201ENST00000376957 THYN1Q9P016 225 aa17.04■□□□□ 0.32
SRM-201ENST00000376957 TRBV9A0A0B4J1U6 114 aa17.03■□□□□ 0.32
SRM-201ENST00000376957 H3BMQ9 156 aa17.03■□□□□ 0.32
SRM-201ENST00000376957 RAB3DO95716 219 aa17.03■□□□□ 0.32
SRM-201ENST00000376957 KRASP01116 189 aa17.03■□□□□ 0.32
SRM-201ENST00000376957 MEF2DQ14814 521 aa17.03■□□□□ 0.32
SRM-201ENST00000376957 RPEL1Q2QD12 228 aa17.03■□□□□ 0.32
SRM-201ENST00000376957 ACSM6Q6P461 480 aa17.03■□□□□ 0.32
SRM-201ENST00000376957 TBC1D26Q86UD7 250 aa17.03■□□□□ 0.32
SRM-201ENST00000376957 CADM3Q8N126 398 aa17.03■□□□□ 0.32
SRM-201ENST00000376957 OR6Q1Q8NGQ2 317 aa17.03■□□□□ 0.32
SRM-201ENST00000376957 ZFAND1Q8TCF1 268 aa17.03■□□□□ 0.32
SRM-201ENST00000376957 MIXL1Q9H2W2 232 aa17.03■□□□□ 0.32
SRM-201ENST00000376957 AKIP1Q9NQ31 210 aa17.03■□□□□ 0.32
SRM-201ENST00000376957 RSL24D1Q9UHA3 163 aaKnown RBP17.03■□□□□ 0.32
SRM-201ENST00000376957 ZNF256Q9Y2P7 627 aaPredicted RBP17.03■□□□□ 0.32
SRM-201ENST00000376957 WI2-2373I1.2A0A1W2PRP0 233 aa17.02■□□□□ 0.32
SRM-201ENST00000376957 TEX22C9J3V5 150 aa17.02■□□□□ 0.32
SRM-201ENST00000376957 K7EIL1 84 aa17.02■□□□□ 0.32
SRM-201ENST00000376957 SERPINE2P07093 398 aa17.02■□□□□ 0.32
SRM-201ENST00000376957 IL6RP08887 468 aaPredicted RBP17.02■□□□□ 0.32
SRM-201ENST00000376957 PSMB6P28072 239 aa17.02■□□□□ 0.32
SRM-201ENST00000376957 C15orf32Q32M92 178 aa17.02■□□□□ 0.32
SRM-201ENST00000376957 STEAP1BQ6NZ63 245 aa17.02■□□□□ 0.32
SRM-201ENST00000376957 MCFD2Q8NI22 146 aa17.02■□□□□ 0.32
SRM-201ENST00000376957 CTDSPLO15194 276 aa17.01■□□□□ 0.31
SRM-201ENST00000376957 ATG12O94817 140 aa17.01■□□□□ 0.31
SRM-201ENST00000376957 LY86O95711 162 aa17.01■□□□□ 0.31
SRM-201ENST00000376957 PRH1P02810 166 aa17.01■□□□□ 0.31
SRM-201ENST00000376957 CRYGCP07315 174 aa17.01■□□□□ 0.31
SRM-201ENST00000376957 OR2B8PP59922 312 aa17.01■□□□□ 0.31
SRM-201ENST00000376957 EXOSC2Q13868 293 aaKnown RBP17.01■□□□□ 0.31
SRM-201ENST00000376957 SCGB2B2Q4G0G5 96 aa17.01■□□□□ 0.31
SRM-201ENST00000376957 CCDC71LQ8N9Z2 235 aa17.01■□□□□ 0.31
SRM-201ENST00000376957 TERB2Q8NHR7 220 aa17.01■□□□□ 0.31
SRM-201ENST00000376957 SMIM4Q8WVI0 70 aa17.01■□□□□ 0.31
SRM-201ENST00000376957 QTRT1Q9BXR0 403 aaKnown RBP17.01■□□□□ 0.31
SRM-201ENST00000376957 FBXL7Q9UJT9 491 aa17.01■□□□□ 0.31
SRM-201ENST00000376957 PRNDQ9UKY0 176 aa17.01■□□□□ 0.31
SRM-201ENST00000376957 DISC1C4P0D8 188 aa17■□□□□ 0.31
SRM-201ENST00000376957 OR2J3O76001 311 aa17■□□□□ 0.31
SRM-201ENST00000376957 CD74P04233 296 aa17■□□□□ 0.31
SRM-201ENST00000376957 TRAPPC2P0DI81 140 aa17■□□□□ 0.31
SRM-201ENST00000376957 TRAPPC2BP0DI82 140 aa17■□□□□ 0.31
SRM-201ENST00000376957 RPA2P15927 270 aa17■□□□□ 0.31
SRM-201ENST00000376957 OR1L8Q8NGR8 309 aa17■□□□□ 0.31
SRM-201ENST00000376957 COPZ2Q9P299 210 aa17■□□□□ 0.31
SRM-201ENST00000376957 PEMTQ9UBM1 199 aa17■□□□□ 0.31
SRM-201ENST00000376957 CTRB1P17538 263 aa16.99■□□□□ 0.31
SRM-201ENST00000376957 G6PCP35575 357 aa16.99■□□□□ 0.31
SRM-201ENST00000376957 RND3P61587 244 aa16.99■□□□□ 0.31
SRM-201ENST00000376957 CTRB2Q6GPI1 263 aa16.99■□□□□ 0.31
SRM-201ENST00000376957 H2BFWTQ7Z2G1 175 aa16.99■□□□□ 0.31
SRM-201ENST00000376957 EEF1AKMT3Q96AZ1 226 aa16.99■□□□□ 0.31
SRM-201ENST00000376957 CXorf58Q96LI9 332 aa16.99■□□□□ 0.31
SRM-201ENST00000376957 TMEM56Q96MV1 263 aa16.99■□□□□ 0.31
SRM-201ENST00000376957 SLIRPQ9GZT3 109 aaKnown RBP16.99■□□□□ 0.31
SRM-201ENST00000376957 FABP12A6NFH5 140 aa16.98■□□□□ 0.31
SRM-201ENST00000376957 E7EUB6 86 aa16.98■□□□□ 0.31
SRM-201ENST00000376957 B3GALNT1O75752 331 aa16.98■□□□□ 0.31
SRM-201ENST00000376957 AREGP15514 252 aa16.98■□□□□ 0.31
SRM-201ENST00000376957 PTBP1P26599 531 aaKnown RBP eCLIP16.98■□□□□ 0.31
SRM-201ENST00000376957 S100A5P33763 92 aa16.98■□□□□ 0.31
SRM-201ENST00000376957 PIGPP57054 158 aa16.98■□□□□ 0.31
SRM-201ENST00000376957 DEFA5Q01523 94 aa16.98■□□□□ 0.31
SRM-201ENST00000376957 ZNF45Q02386 682 aa16.98■□□□□ 0.31
SRM-201ENST00000376957 KLF5Q13887 457 aaPredicted RBP16.98■□□□□ 0.31
SRM-201ENST00000376957 ZNF585BQ52M93 769 aa16.98■□□□□ 0.31
SRM-201ENST00000376957 OR9G4Q8NGQ1 327 aa16.98■□□□□ 0.31
SRM-201ENST00000376957 OR5B3Q8NH48 314 aa16.98■□□□□ 0.31
SRM-201ENST00000376957 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.97■□□□□ 0.31
SRM-201ENST00000376957 TRAV3A0A0B4J244 114 aa16.97■□□□□ 0.31
SRM-201ENST00000376957 AKAIN1P0CW23 69 aa16.97■□□□□ 0.31
SRM-201ENST00000376957 PPP5CP53041 499 aa16.97■□□□□ 0.31
SRM-201ENST00000376957 SYNJ2BPP57105 145 aa16.97■□□□□ 0.31
SRM-201ENST00000376957 LHFPL1Q86WI0 220 aa16.97■□□□□ 0.31
SRM-201ENST00000376957 OR4A16Q8NH70 328 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms