RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 DNAH7Q8WXX0 4024 aa11.12□□□□□ -0.63
HDAC6-204ENST00000376643 TRAV18A0A075B6X5 111 aa11.12□□□□□ -0.63
HDAC6-204ENST00000376643 SSX5O60225 188 aa11.12□□□□□ -0.63
HDAC6-204ENST00000376643 CD7P09564 240 aa11.12□□□□□ -0.63
HDAC6-204ENST00000376643 SDC2P34741 201 aa11.12□□□□□ -0.63
HDAC6-204ENST00000376643 POU2AF1Q16633 256 aa11.12□□□□□ -0.63
HDAC6-204ENST00000376643 ADAMTSL5Q6ZMM2 481 aa11.12□□□□□ -0.63
HDAC6-204ENST00000376643 RBPMS2Q6ZRY4 209 aaKnown RBP11.12□□□□□ -0.63
HDAC6-204ENST00000376643 SSX9Q7RTT3 188 aa11.12□□□□□ -0.63
HDAC6-204ENST00000376643 DEFB125Q8N687 156 aa11.12□□□□□ -0.63
HDAC6-204ENST00000376643 OR52B4Q8NGK2 314 aa11.12□□□□□ -0.63
HDAC6-204ENST00000376643 CCDC140Q96MF4 163 aa11.12□□□□□ -0.63
HDAC6-204ENST00000376643 FANCD2OSQ96PS1 177 aa11.12□□□□□ -0.63
HDAC6-204ENST00000376643 SLC5A7Q9GZV3 580 aa11.12□□□□□ -0.63
HDAC6-204ENST00000376643 PLEKHA2Q9HB19 425 aa11.12□□□□□ -0.63
HDAC6-204ENST00000376643 COMMD9Q9P000 198 aa11.12□□□□□ -0.63
HDAC6-204ENST00000376643 TENM2Q9NT68 2774 aa11.11□□□□□ -0.63
HDAC6-204ENST00000376643 IGLV11-55A0A075B6I3 123 aa11.11□□□□□ -0.63
HDAC6-204ENST00000376643 NDUFB8O95169 186 aa11.11□□□□□ -0.63
HDAC6-204ENST00000376643 AREGP15514 252 aa11.11□□□□□ -0.63
HDAC6-204ENST00000376643 HERV-K104P61576 105 aa11.11□□□□□ -0.63
HDAC6-204ENST00000376643 IDNKQ5T6J7 187 aa11.11□□□□□ -0.63
HDAC6-204ENST00000376643 SLC38A6Q8IZM9 456 aa11.11□□□□□ -0.63
HDAC6-204ENST00000376643 DMBX1Q8NFW5 382 aa11.11□□□□□ -0.63
HDAC6-204ENST00000376643 GIMAP1Q8WWP7 306 aa11.11□□□□□ -0.63
HDAC6-204ENST00000376643 WDR89Q96FK6 387 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-204ENST00000376643 ATP6V0BQ99437 205 aa11.11□□□□□ -0.63
HDAC6-204ENST00000376643 GGTLC1Q9BX51 225 aa11.11□□□□□ -0.63
HDAC6-204ENST00000376643 IFT46Q9NQC8 304 aa11.11□□□□□ -0.63
HDAC6-204ENST00000376643 CCL28Q9NRJ3 127 aa11.11□□□□□ -0.63
HDAC6-204ENST00000376643 MRPL27Q9P0M9 148 aaKnown RBP11.11□□□□□ -0.63
HDAC6-204ENST00000376643 DMRT1Q9Y5R6 373 aa11.11□□□□□ -0.63
HDAC6-204ENST00000376643 LOC102724200A0A096LPH7 203 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-204ENST00000376643 TMEM213A2RRL7 107 aa11.1□□□□□ -0.63
HDAC6-204ENST00000376643 TNFSF12O43508 249 aa11.1□□□□□ -0.63
HDAC6-204ENST00000376643 HLA-AP01891 365 aaKnown RBP11.1□□□□□ -0.63
HDAC6-204ENST00000376643 CLEC3BP05452 202 aa11.1□□□□□ -0.63
HDAC6-204ENST00000376643 PTBP1P26599 531 aaKnown RBP eCLIP11.1□□□□□ -0.63
HDAC6-204ENST00000376643 MXD1Q05195 221 aa11.1□□□□□ -0.63
HDAC6-204ENST00000376643 AADACL3Q5VUY0 350 aa11.1□□□□□ -0.63
HDAC6-204ENST00000376643 ZNF773Q6PK81 442 aa11.1□□□□□ -0.63
HDAC6-204ENST00000376643 PLET1Q6UQ28 207 aa11.1□□□□□ -0.63
HDAC6-204ENST00000376643 TMEM61Q8N0U2 210 aa11.1□□□□□ -0.63
HDAC6-204ENST00000376643 UXS1Q8NBZ7 420 aa11.1□□□□□ -0.63
HDAC6-204ENST00000376643 OR5AP2Q8NGF4 316 aa11.1□□□□□ -0.63
HDAC6-204ENST00000376643 OR1L6Q8NGR2 347 aa11.1□□□□□ -0.63
HDAC6-204ENST00000376643 VN1R17PQ8TDU5 208 aa11.1□□□□□ -0.63
HDAC6-204ENST00000376643 QTRT1Q9BXR0 403 aaKnown RBP11.1□□□□□ -0.63
HDAC6-204ENST00000376643 LOC100506127A0A0U1RQW1 187 aa11.09□□□□□ -0.63
HDAC6-204ENST00000376643 RBMY1BA6NDE4 496 aaKnown RBP11.09□□□□□ -0.63
HDAC6-204ENST00000376643 RBMY1EA6NEQ0 496 aaKnown RBP11.09□□□□□ -0.63
HDAC6-204ENST00000376643 SULT1C2O00338 296 aa11.09□□□□□ -0.63
HDAC6-204ENST00000376643 UPK2O00526 184 aa11.09□□□□□ -0.63
HDAC6-204ENST00000376643 IGHV3-23P01764 117 aa11.09□□□□□ -0.63
HDAC6-204ENST00000376643 RBMY1DP0C7P1 496 aaKnown RBP11.09□□□□□ -0.63
HDAC6-204ENST00000376643 S100GP29377 79 aa11.09□□□□□ -0.63
HDAC6-204ENST00000376643 BRWD1-AS2P59051 145 aa11.09□□□□□ -0.63
HDAC6-204ENST00000376643 FXYD4P59646 89 aa11.09□□□□□ -0.63
HDAC6-204ENST00000376643 OR2B8PP59922 312 aa11.09□□□□□ -0.63
HDAC6-204ENST00000376643 LAMTOR1Q6IAA8 161 aa11.09□□□□□ -0.63
HDAC6-204ENST00000376643 SPSB3Q6PJ21 355 aa11.09□□□□□ -0.63
HDAC6-204ENST00000376643 CMTM1Q8IZ96 169 aa11.09□□□□□ -0.63
HDAC6-204ENST00000376643 S100A16Q96FQ6 103 aaKnown RBP11.09□□□□□ -0.63
HDAC6-204ENST00000376643 SPAG8Q99932 426 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-204ENST00000376643 AUNIPQ9H7T9 357 aa11.09□□□□□ -0.63
HDAC6-204ENST00000376643 RETNQ9HD89 108 aa11.09□□□□□ -0.63
HDAC6-204ENST00000376643 GAR1Q9NY12 217 aaKnown RBP11.09□□□□□ -0.63
HDAC6-204ENST00000376643 E7EUB6 86 aa11.08□□□□□ -0.64
HDAC6-204ENST00000376643 GPR183P32249 361 aa11.08□□□□□ -0.64
HDAC6-204ENST00000376643 APOC4P55056 127 aa11.08□□□□□ -0.64
HDAC6-204ENST00000376643 TAS2R46P59540 309 aa11.08□□□□□ -0.64
HDAC6-204ENST00000376643 BTNL8Q6UX41 500 aa11.08□□□□□ -0.64
HDAC6-204ENST00000376643 TMEM17Q86X19 198 aa11.08□□□□□ -0.64
HDAC6-204ENST00000376643 CADM3Q8N126 398 aa11.08□□□□□ -0.64
HDAC6-204ENST00000376643 GDPD1Q8N9F7 314 aa11.08□□□□□ -0.64
HDAC6-204ENST00000376643 TSPAN14Q8NG11 270 aa11.08□□□□□ -0.64
HDAC6-204ENST00000376643 OR1L8Q8NGR8 309 aa11.08□□□□□ -0.64
HDAC6-204ENST00000376643 OR51H1Q8NH63 302 aa11.08□□□□□ -0.64
HDAC6-204ENST00000376643 ZNF502Q8TBZ5 544 aa11.08□□□□□ -0.64
HDAC6-204ENST00000376643 SLC25A38Q96DW6 304 aa11.08□□□□□ -0.64
HDAC6-204ENST00000376643 BSCL2Q96G97 398 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-204ENST00000376643 FAM110AQ9BQ89 295 aa11.08□□□□□ -0.64
HDAC6-204ENST00000376643 C5orf66Q9H5L9 145 aa11.08□□□□□ -0.64
HDAC6-204ENST00000376643 TMEM140Q9NV12 185 aa11.08□□□□□ -0.64
HDAC6-204ENST00000376643 A0A1B0GW64 132 aa11.07□□□□□ -0.64
HDAC6-204ENST00000376643 IGLC7A0M8Q6 106 aa11.07□□□□□ -0.64
HDAC6-204ENST00000376643 SNAPC5O75971 98 aa11.07□□□□□ -0.64
HDAC6-204ENST00000376643 REG1AP05451 166 aa11.07□□□□□ -0.64
HDAC6-204ENST00000376643 TRAPPC2P0DI81 140 aa11.07□□□□□ -0.64
HDAC6-204ENST00000376643 TRAPPC2BP0DI82 140 aa11.07□□□□□ -0.64
HDAC6-204ENST00000376643 C8orf88P0DMB2 117 aa11.07□□□□□ -0.64
HDAC6-204ENST00000376643 OR2C3Q8N628 320 aa11.07□□□□□ -0.64
HDAC6-204ENST00000376643 GVQW1Q8N7I0 195 aa11.07□□□□□ -0.64
HDAC6-204ENST00000376643 CACNG8Q8WXS5 425 aa11.07□□□□□ -0.64
HDAC6-204ENST00000376643 LSM10Q969L4 123 aaKnown RBP11.07□□□□□ -0.64
HDAC6-204ENST00000376643 TSC22D3Q99576 134 aa11.07□□□□□ -0.64
HDAC6-204ENST00000376643 DAZ1Q9NQZ3 744 aaKnown RBP11.07□□□□□ -0.64
HDAC6-204ENST00000376643 FKBP11Q9NYL4 201 aa11.07□□□□□ -0.64
HDAC6-204ENST00000376643 MLXQ9UH92 298 aa11.07□□□□□ -0.64
HDAC6-204ENST00000376643 TP53TG1Q9Y2A0 90 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms