RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 IL19Q9UHD0 177 aa11.55□□□□□ -0.56
MSH5-202ENST00000375740 ICE1Q9Y2F5 2266 aa11.55□□□□□ -0.56
MSH5-202ENST00000375740 C16orf97H3BN30 126 aa11.55□□□□□ -0.56
MSH5-202ENST00000375740 YPEL1O60688 119 aa11.55□□□□□ -0.56
MSH5-202ENST00000375740 DUTP33316 252 aaKnown RBP11.55□□□□□ -0.56
MSH5-202ENST00000375740 ZNF134P52741 427 aa11.55□□□□□ -0.56
MSH5-202ENST00000375740 OR8G2PQ6IF36 304 aa11.55□□□□□ -0.56
MSH5-202ENST00000375740 GFRALQ6UXV0 394 aa11.55□□□□□ -0.56
MSH5-202ENST00000375740 DPPA3Q6W0C5 159 aa11.55□□□□□ -0.56
MSH5-202ENST00000375740 CYP2G1PQ6ZSU1 146 aa11.55□□□□□ -0.56
MSH5-202ENST00000375740 DEFB108BQ8NET1 73 aa11.55□□□□□ -0.56
MSH5-202ENST00000375740 MBD3L1Q8WWY6 194 aa11.55□□□□□ -0.56
MSH5-202ENST00000375740 MS4A10Q96PG2 267 aa11.55□□□□□ -0.56
MSH5-202ENST00000375740 YPEL2Q96QA6 119 aa11.55□□□□□ -0.56
MSH5-202ENST00000375740 OR5B12Q96R08 314 aa11.55□□□□□ -0.56
MSH5-202ENST00000375740 DSCAMO60469 2012 aa11.55□□□□□ -0.56
MSH5-202ENST00000375740 ZGRF1Q86YA3 2104 aa11.55□□□□□ -0.56
MSH5-202ENST00000375740 TBR1Q16650 682 aa11.54□□□□□ -0.56
MSH5-202ENST00000375740 DUX4L9Q6RFH8 374 aaPredicted RBP11.54□□□□□ -0.56
MSH5-202ENST00000375740 WFDC8Q8IUA0 241 aa11.54□□□□□ -0.56
MSH5-202ENST00000375740 FAM222BQ8WU58 562 aa11.54□□□□□ -0.56
MSH5-202ENST00000375740 F2RL2O00254 374 aa11.54□□□□□ -0.56
MSH5-202ENST00000375740 SIAH2O43255 324 aa11.54□□□□□ -0.56
MSH5-202ENST00000375740 HRASP01112 189 aa11.54□□□□□ -0.56
MSH5-202ENST00000375740 IGKV1D-33P01593 117 aa11.54□□□□□ -0.56
MSH5-202ENST00000375740 IGKV1-33P01594 117 aa11.54□□□□□ -0.56
MSH5-202ENST00000375740 CGB3P0DN86 165 aa11.54□□□□□ -0.56
MSH5-202ENST00000375740 CGB7P0DN87 165 aa11.54□□□□□ -0.56
MSH5-202ENST00000375740 OR10J1P30954 320 aa11.54□□□□□ -0.56
MSH5-202ENST00000375740 SLC38A11Q08AI6 406 aa11.54□□□□□ -0.56
MSH5-202ENST00000375740 UTF1Q5T230 341 aa11.54□□□□□ -0.56
MSH5-202ENST00000375740 CENPVQ7Z7K6 275 aaPredicted RBP11.54□□□□□ -0.56
MSH5-202ENST00000375740 OR2T10Q8NGZ9 312 aa11.54□□□□□ -0.56
MSH5-202ENST00000375740 P2RX4Q99571 388 aa11.54□□□□□ -0.56
MSH5-202ENST00000375740 SCNM1Q9BWG6 230 aa11.54□□□□□ -0.56
MSH5-202ENST00000375740 ELOVL5Q9NYP7 299 aa11.54□□□□□ -0.56
MSH5-202ENST00000375740 CALYQ9NYX4 217 aa11.54□□□□□ -0.56
MSH5-202ENST00000375740 MAP1LC3B2A6NCE7 125 aa11.53□□□□□ -0.56
MSH5-202ENST00000375740 ZG16O60844 167 aa11.53□□□□□ -0.56
MSH5-202ENST00000375740 FCGR3BO75015 233 aa11.53□□□□□ -0.56
MSH5-202ENST00000375740 RPL39P5Q59GN2 51 aa11.53□□□□□ -0.56
MSH5-202ENST00000375740 TMEM108Q6UXF1 575 aa11.53□□□□□ -0.56
MSH5-202ENST00000375740 NUP37Q8NFH4 326 aa11.53□□□□□ -0.56
MSH5-202ENST00000375740 ZDHHC16Q969W1 377 aa11.53□□□□□ -0.56
MSH5-202ENST00000375740 MAP1LC3BQ9GZQ8 125 aa11.53□□□□□ -0.56
MSH5-202ENST00000375740 WDR61Q9GZS3 305 aaKnown RBP11.53□□□□□ -0.56
MSH5-202ENST00000375740 PARLQ9H300 379 aa11.53□□□□□ -0.56
MSH5-202ENST00000375740 PAM16Q9Y3D7 125 aa11.53□□□□□ -0.56
MSH5-202ENST00000375740 DOCK11Q5JSL3 2073 aa11.53□□□□□ -0.56
MSH5-202ENST00000375740 DPRXA6NFQ7 191 aa11.53□□□□□ -0.56
MSH5-202ENST00000375740 M0QZK8 103 aa11.53□□□□□ -0.56
MSH5-202ENST00000375740 M0R1X1 148 aa11.53□□□□□ -0.56
MSH5-202ENST00000375740 GGCTO75223 188 aaKnown RBP11.53□□□□□ -0.56
MSH5-202ENST00000375740 RBMXL2O75526 392 aaKnown RBP11.53□□□□□ -0.56
MSH5-202ENST00000375740 KBTBD11O94819 623 aa11.53□□□□□ -0.56
MSH5-202ENST00000375740 CHRNA7P36544 502 aa11.53□□□□□ -0.56
MSH5-202ENST00000375740 RPP30P78346 268 aaKnown RBP11.53□□□□□ -0.56
MSH5-202ENST00000375740 C17orf58Q2M2W7 97 aa11.53□□□□□ -0.56
MSH5-202ENST00000375740 SPINK9Q5DT21 86 aa11.53□□□□□ -0.56
MSH5-202ENST00000375740 TOMM20LQ6UXN7 152 aa11.53□□□□□ -0.56
MSH5-202ENST00000375740 RNASE8Q8TDE3 154 aaKnown RBP11.53□□□□□ -0.56
MSH5-202ENST00000375740 LEAP2Q969E1 77 aa11.53□□□□□ -0.56
MSH5-202ENST00000375740 PSMG3Q9BT73 122 aaPredicted RBP11.53□□□□□ -0.56
MSH5-202ENST00000375740 FAM234AQ9H0X4 552 aa11.53□□□□□ -0.56
MSH5-202ENST00000375740 PTPRZ1P23471 2315 aaPredicted RBP11.53□□□□□ -0.56
MSH5-202ENST00000375740 RP1L1Q8IWN7 2480 aaPredicted RBP11.53□□□□□ -0.56
MSH5-202ENST00000375740 IL6RP08887 468 aaPredicted RBP11.53□□□□□ -0.56
MSH5-202ENST00000375740 TNFSF4P23510 183 aa11.53□□□□□ -0.56
MSH5-202ENST00000375740 ANKRD11Q6UB99 2663 aaPredicted RBP11.52□□□□□ -0.56
MSH5-202ENST00000375740 UBE2L5PA0A1B0GUS4 154 aa11.52□□□□□ -0.57
MSH5-202ENST00000375740 GRIFINA4D1Z8 144 aa11.52□□□□□ -0.57
MSH5-202ENST00000375740 RPS16P62249 146 aaKnown RBP11.52□□□□□ -0.57
MSH5-202ENST00000375740 MEF2BQ02080 365 aaPredicted RBP11.52□□□□□ -0.57
MSH5-202ENST00000375740 PRR30Q53SZ7 412 aaPredicted RBP11.52□□□□□ -0.57
MSH5-202ENST00000375740 STUMQ69YW2 141 aa11.52□□□□□ -0.57
MSH5-202ENST00000375740 TCF23Q7RTU1 214 aa11.52□□□□□ -0.57
MSH5-202ENST00000375740 RPP25LQ8N5L8 163 aaKnown RBP11.52□□□□□ -0.57
MSH5-202ENST00000375740 SNRNP40Q96DI7 357 aaKnown RBP11.52□□□□□ -0.57
MSH5-202ENST00000375740 CCL13Q99616 98 aa11.52□□□□□ -0.57
MSH5-202ENST00000375740 IFI27L2Q9H2X8 130 aa11.52□□□□□ -0.57
MSH5-202ENST00000375740 DNAJC4Q9NNZ3 241 aa11.52□□□□□ -0.57
MSH5-202ENST00000375740 RAI1Q7Z5J4 1906 aaPredicted RBP11.52□□□□□ -0.57
MSH5-202ENST00000375740 DYSFO75923 2080 aa11.52□□□□□ -0.57
MSH5-202ENST00000375740 GYPAP02724 150 aa11.52□□□□□ -0.57
MSH5-202ENST00000375740 THBDP07204 575 aa11.52□□□□□ -0.57
MSH5-202ENST00000375740 OR9G9P0C7N8 305 aa11.52□□□□□ -0.57
MSH5-202ENST00000375740 CDKN1AP38936 164 aa11.52□□□□□ -0.57
MSH5-202ENST00000375740 ACOT6Q3I5F7 207 aaPredicted RBP11.52□□□□□ -0.57
MSH5-202ENST00000375740 C1orf229Q6ZS94 237 aaPredicted RBP11.52□□□□□ -0.57
MSH5-202ENST00000375740 Q6ZWC4 215 aa11.52□□□□□ -0.57
MSH5-202ENST00000375740 ZCCHC14Q8WYQ9 949 aaKnown RBP11.52□□□□□ -0.57
MSH5-202ENST00000375740 TAF15Q92804 592 aaKnown RBP eCLIP11.52□□□□□ -0.57
MSH5-202ENST00000375740 LHX4Q969G2 390 aa11.52□□□□□ -0.57
MSH5-202ENST00000375740 GAFA1Q96PS6 74 aa11.52□□□□□ -0.57
MSH5-202ENST00000375740 PARD6GQ9BYG4 376 aaPredicted RBP11.52□□□□□ -0.57
MSH5-202ENST00000375740 NCOR1P1Q9H4R4 102 aa11.52□□□□□ -0.57
MSH5-202ENST00000375740 ZNF835Q9Y2P0 537 aa11.52□□□□□ -0.57
MSH5-202ENST00000375740 PMS2P5A8MQ11 134 aa11.51□□□□□ -0.57
MSH5-202ENST00000375740 IL3RAP26951 378 aa11.51□□□□□ -0.57
MSH5-202ENST00000375740 CCL8P80075 99 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms