RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 SSBP3Q9BWW4 388 aaPredicted RBP15.04■□□□□ -0
PTPDC1-202ENST00000375360 DPM3Q9P2X0 92 aa15.04■□□□□ -0
PTPDC1-202ENST00000375360 RNF222A6NCQ9 220 aa15.03■□□□□ -0
PTPDC1-202ENST00000375360 PMCHP20382 165 aa15.03■□□□□ -0
PTPDC1-202ENST00000375360 COL8A1P27658 744 aa15.03■□□□□ -0
PTPDC1-202ENST00000375360 FXYD3Q14802 87 aa15.03■□□□□ -0
PTPDC1-202ENST00000375360 MRPL54Q6P161 138 aaKnown RBP15.03■□□□□ -0
PTPDC1-202ENST00000375360 ZNF705AQ6ZN79 300 aaPredicted RBP15.03■□□□□ -0
PTPDC1-202ENST00000375360 IGHV3OR16-13A0A075B7E8 117 aa15.03■□□□□ -0
PTPDC1-202ENST00000375360 IGHV3-74A0A0B4J1X5 117 aa15.03■□□□□ -0
PTPDC1-202ENST00000375360 CA2P00918 260 aa15.03■□□□□ -0
PTPDC1-202ENST00000375360 OR4A47Q6IF82 309 aa15.03■□□□□ -0
PTPDC1-202ENST00000375360 HS3ST6Q96QI5 342 aa15.03■□□□□ -0
PTPDC1-202ENST00000375360 WDR61Q9GZS3 305 aaKnown RBP15.03■□□□□ -0
PTPDC1-202ENST00000375360 H0YIZ8 118 aa15.03■□□□□ -0
PTPDC1-202ENST00000375360 HIST1H3AP68431 136 aa15.03■□□□□ -0
PTPDC1-202ENST00000375360 EGR1P18146 543 aa15.02■□□□□ -0
PTPDC1-202ENST00000375360 LOXL3P58215 753 aa15.02■□□□□ -0
PTPDC1-202ENST00000375360 KRTDAPP60985 99 aa15.02■□□□□ -0
PTPDC1-202ENST00000375360 SLC35B1P78383 322 aa15.02■□□□□ -0
PTPDC1-202ENST00000375360 MEF2BQ02080 365 aaPredicted RBP15.02■□□□□ -0
PTPDC1-202ENST00000375360 PUSL1Q8N0Z8 303 aaKnown RBP15.02■□□□□ -0
PTPDC1-202ENST00000375360 OR5R1Q8NH85 324 aa15.02■□□□□ -0
PTPDC1-202ENST00000375360 SPSB4Q96A44 273 aa15.02■□□□□ -0
PTPDC1-202ENST00000375360 SRRM5B3KS81 715 aa15.02■□□□□ -0
PTPDC1-202ENST00000375360 TGOLN2O43493 480 aa15.02■□□□□ -0
PTPDC1-202ENST00000375360 MPDU1O75352 247 aa15.02■□□□□ -0
PTPDC1-202ENST00000375360 WDR31Q8NA23 367 aa15.02■□□□□ -0
PTPDC1-202ENST00000375360 HIGD1AQ9Y241 93 aa15.02■□□□□ -0
PTPDC1-202ENST00000375360 FOXH1O75593 365 aa15.02□□□□□ -0.01
PTPDC1-202ENST00000375360 LINC00312Q9Y6C7 94 aa15.02□□□□□ -0.01
PTPDC1-202ENST00000375360 TFPI2P48307 235 aa15.02□□□□□ -0.01
PTPDC1-202ENST00000375360 MORN2Q502X0 79 aa15.02□□□□□ -0.01
PTPDC1-202ENST00000375360 TMEM18Q96B42 140 aa15.02□□□□□ -0.01
PTPDC1-202ENST00000375360 GAR1Q9NY12 217 aaKnown RBP15.02□□□□□ -0.01
PTPDC1-202ENST00000375360 TMEM208Q9BTX3 173 aa15.01□□□□□ -0.01
PTPDC1-202ENST00000375360 MOSP00540 346 aa15.01□□□□□ -0.01
PTPDC1-202ENST00000375360 DNM1P46Q6ZS02 220 aa15.01□□□□□ -0.01
PTPDC1-202ENST00000375360 NEU4Q8WWR8 484 aaPredicted RBP15.01□□□□□ -0.01
PTPDC1-202ENST00000375360 NEUROG1Q92886 237 aa15.01□□□□□ -0.01
PTPDC1-202ENST00000375360 RNF126Q9BV68 326 aa15.01□□□□□ -0.01
PTPDC1-202ENST00000375360 SAA2-SAA4A0A096LPE2 208 aa15.01□□□□□ -0.01
PTPDC1-202ENST00000375360 TM4SF5O14894 197 aa15.01□□□□□ -0.01
PTPDC1-202ENST00000375360 SAA2P0DJI9 122 aaPredicted RBP15.01□□□□□ -0.01
PTPDC1-202ENST00000375360 RND3P61587 244 aa15.01□□□□□ -0.01
PTPDC1-202ENST00000375360 DEFA6Q01524 100 aa15.01□□□□□ -0.01
PTPDC1-202ENST00000375360 STXBP6Q8NFX7 210 aa15.01□□□□□ -0.01
PTPDC1-202ENST00000375360 TXN2Q99757 166 aa15.01□□□□□ -0.01
PTPDC1-202ENST00000375360 PHOX2AO14813 284 aa15□□□□□ -0.01
PTPDC1-202ENST00000375360 GNLYP22749 145 aa15□□□□□ -0.01
PTPDC1-202ENST00000375360 FCGR2BP31994 310 aaPredicted RBP15□□□□□ -0.01
PTPDC1-202ENST00000375360 ORM1P02763 201 aa15□□□□□ -0.01
PTPDC1-202ENST00000375360 SELENOTP62341 195 aa15□□□□□ -0.01
PTPDC1-202ENST00000375360 PIP4P1Q86T03 277 aa15□□□□□ -0.01
PTPDC1-202ENST00000375360 TMPRSS5Q9H3S3 457 aa15□□□□□ -0.01
PTPDC1-202ENST00000375360 ZNF586Q9NXT0 402 aa15□□□□□ -0.01
PTPDC1-202ENST00000375360 PLXNB3Q9ULL4 1909 aa15□□□□□ -0.01
PTPDC1-202ENST00000375360 IGHV3OR16-8A0A075B7F1 116 aa15□□□□□ -0.01
PTPDC1-202ENST00000375360 DPRXA6NFQ7 191 aa15□□□□□ -0.01
PTPDC1-202ENST00000375360 SMAD7O15105 426 aaKnown RBP15□□□□□ -0.01
PTPDC1-202ENST00000375360 MLNRO43193 412 aa15□□□□□ -0.01
PTPDC1-202ENST00000375360 CSN3P07498 182 aa15□□□□□ -0.01
PTPDC1-202ENST00000375360 HOXA4Q00056 320 aaPredicted RBP15□□□□□ -0.01
PTPDC1-202ENST00000375360 TMEM42Q69YG0 159 aa15□□□□□ -0.01
PTPDC1-202ENST00000375360 OR10D4PQ8NGN7 298 aa15□□□□□ -0.01
PTPDC1-202ENST00000375360 ZNF430Q9H8G1 570 aaPredicted RBP15□□□□□ -0.01
PTPDC1-202ENST00000375360 CGB1A6NKQ9 187 aa15□□□□□ -0.01
PTPDC1-202ENST00000375360 K7ENP7 123 aa15□□□□□ -0.01
PTPDC1-202ENST00000375360 OR2J3O76001 311 aa15□□□□□ -0.01
PTPDC1-202ENST00000375360 IGKV1D-33P01593 117 aa15□□□□□ -0.01
PTPDC1-202ENST00000375360 IGKV1-33P01594 117 aa15□□□□□ -0.01
PTPDC1-202ENST00000375360 FAM168AQ92567 244 aa15□□□□□ -0.01
PTPDC1-202ENST00000375360 SLC16A13Q7RTY0 426 aa14.99□□□□□ -0.01
PTPDC1-202ENST00000375360 PGPA6NDG6 321 aa14.99□□□□□ -0.01
PTPDC1-202ENST00000375360 PDE6DO43924 150 aa14.99□□□□□ -0.01
PTPDC1-202ENST00000375360 MEF2CQ06413 473 aaPredicted RBP14.99□□□□□ -0.01
PTPDC1-202ENST00000375360 DANCRP0C864 163 aa14.99□□□□□ -0.01
PTPDC1-202ENST00000375360 BMI1P35226 326 aa14.99□□□□□ -0.01
PTPDC1-202ENST00000375360 TCF15Q12870 199 aa14.99□□□□□ -0.01
PTPDC1-202ENST00000375360 ZNF146Q15072 292 aa14.99□□□□□ -0.01
PTPDC1-202ENST00000375360 PCSK4Q6UW60 755 aa14.99□□□□□ -0.01
PTPDC1-202ENST00000375360 RRHO14718 337 aa14.98□□□□□ -0.01
PTPDC1-202ENST00000375360 CD55P08174 381 aa14.98□□□□□ -0.01
PTPDC1-202ENST00000375360 GATA2P23769 480 aaPredicted RBP14.98□□□□□ -0.01
PTPDC1-202ENST00000375360 OSR1Q8TAX0 266 aaPredicted RBP14.98□□□□□ -0.01
PTPDC1-202ENST00000375360 C12orf57Q99622 126 aa14.98□□□□□ -0.01
PTPDC1-202ENST00000375360 DNAJC4Q9NNZ3 241 aa14.98□□□□□ -0.01
PTPDC1-202ENST00000375360 LOC102723971A0A1B0GUV8 181 aa14.98□□□□□ -0.01
PTPDC1-202ENST00000375360 RPEL1Q2QD12 228 aa14.98□□□□□ -0.01
PTPDC1-202ENST00000375360 ZNF503-AS2A6NEH8 195 aa14.98□□□□□ -0.01
PTPDC1-202ENST00000375360 F5H697 171 aa14.98□□□□□ -0.01
PTPDC1-202ENST00000375360 ARL14EPLP0DKL9 152 aa14.98□□□□□ -0.01
PTPDC1-202ENST00000375360 SMIM17P0DL12 118 aa14.98□□□□□ -0.01
PTPDC1-202ENST00000375360 NAT1P18440 290 aa14.98□□□□□ -0.01
PTPDC1-202ENST00000375360 ZNF672Q499Z4 452 aaPredicted RBP14.98□□□□□ -0.01
PTPDC1-202ENST00000375360 NABP2Q9BQ15 211 aa14.98□□□□□ -0.01
PTPDC1-202ENST00000375360 CBLN4Q9NTU7 201 aa14.98□□□□□ -0.01
PTPDC1-202ENST00000375360 CORTO00230 105 aa14.98□□□□□ -0.01
PTPDC1-202ENST00000375360 P01737 135 aa14.98□□□□□ -0.01
PTPDC1-202ENST00000375360 LINC00205P59089 165 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms