RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 ZNF724A8MTY0 619 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 SMKR1H3BMG3 65 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 TIMM23O14925 209 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 BCL3P20749 454 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 OR5D14Q8NGL3 314 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 TMEM106AQ96A25 262 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 SH3BGRL3Q9H299 93 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 PRTFDC1Q9NRG1 225 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 NTMQ9P121 344 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 TRBV20-1A0A075B6N2 111 aa7.4□□□□□ -1.22
UBR4-201ENST00000375218 SAA2-SAA4A0A096LPE2 208 aa7.4□□□□□ -1.22
UBR4-201ENST00000375218 OR2M5A3KFT3 312 aa7.4□□□□□ -1.22
UBR4-201ENST00000375218 SLC17A2O00624 439 aa7.4□□□□□ -1.22
UBR4-201ENST00000375218 PRSS3P35030 304 aa7.4□□□□□ -1.22
UBR4-201ENST00000375218 SAA4P35542 130 aa7.4□□□□□ -1.22
UBR4-201ENST00000375218 SRP14P37108 136 aaKnown RBP7.4□□□□□ -1.22
UBR4-201ENST00000375218 GPM6AP51674 278 aa7.4□□□□□ -1.22
UBR4-201ENST00000375218 FOXC1Q12948 553 aa7.4□□□□□ -1.22
UBR4-201ENST00000375218 TMEM183BQ1AE95 376 aa7.4□□□□□ -1.22
UBR4-201ENST00000375218 SYT8Q8NBV8 401 aa7.4□□□□□ -1.22
UBR4-201ENST00000375218 UNC119BA6NIH7 251 aa7.4□□□□□ -1.22
UBR4-201ENST00000375218 HOXA3O43365 443 aaPredicted RBP7.4□□□□□ -1.22
UBR4-201ENST00000375218 CSRP1P21291 193 aaKnown RBP7.4□□□□□ -1.22
UBR4-201ENST00000375218 HERV-K104P61576 105 aa7.4□□□□□ -1.22
UBR4-201ENST00000375218 LRRC29Q8WV35 223 aa7.4□□□□□ -1.22
UBR4-201ENST00000375218 GNGT2O14610 69 aa7.4□□□□□ -1.23
UBR4-201ENST00000375218 HKR1P10072 659 aa7.4□□□□□ -1.23
UBR4-201ENST00000375218 GNB3P16520 340 aa7.4□□□□□ -1.23
UBR4-201ENST00000375218 STAC2Q6ZMT1 411 aa7.4□□□□□ -1.23
UBR4-201ENST00000375218 Q6ZN92 141 aa7.4□□□□□ -1.23
UBR4-201ENST00000375218 SLC25A33Q9BSK2 321 aa7.4□□□□□ -1.23
UBR4-201ENST00000375218 A0A1B0GTH9 108 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 ZNF670-ZNF695F2Z2N8 137 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 IGHG3P01860 377 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 WNT1P04628 370 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 PGA4P0DJD7 388 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 CX3CL1P78423 397 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 ZNF726P1Q15940 193 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 ECSCRQ19T08 205 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 LINC00482Q8N8I6 264 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 ZFP62Q8NB50 900 aaPredicted RBP7.39□□□□□ -1.23
UBR4-201ENST00000375218 AK3Q9UIJ7 227 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 RIMS3Q9UJD0 308 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 KNL1Q8NG31 2342 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 MUC21A0A0G2JKD1 596 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 TEX48A0A1B0GUV7 120 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.39□□□□□ -1.23
UBR4-201ENST00000375218 B4DXG7 233 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 KLF7O75840 302 aaPredicted RBP7.39□□□□□ -1.23
UBR4-201ENST00000375218 DUS4LO95620 317 aaKnown RBP7.39□□□□□ -1.23
UBR4-201ENST00000375218 IGHG4P01861 327 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 IGHV4-34P06331 123 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 LINC00032P0C843 101 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 PGA5P0DJD9 388 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 CNTFRP26992 372 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 FAM201AQ5SY85 155 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 FBXL14Q8N1E6 418 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 OR10G6Q8NH81 332 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 ZNF524Q96C55 264 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 SLC25A44Q96H78 314 aaPredicted RBP7.39□□□□□ -1.23
UBR4-201ENST00000375218 BMFQ96LC9 184 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 A0A1B0GWB2 263 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 DEDDO75618 318 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 OR4A5Q8NH83 315 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 TMEM9BQ9NQ34 198 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 HEBP1Q9NRV9 189 aa7.39□□□□□ -1.23
UBR4-201ENST00000375218 TNRC6AQ8NDV7 1962 aaKnown RBP7.38□□□□□ -1.23
UBR4-201ENST00000375218 SLC25A14O95258 325 aaPredicted RBP7.38□□□□□ -1.23
UBR4-201ENST00000375218 OR5AL1P0C617 328 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 VSIG8P0DPA2 414 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 MIDNQ504T8 468 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 RNASE12Q5GAN4 147 aaKnown RBP7.38□□□□□ -1.23
UBR4-201ENST00000375218 ING1Q9UK53 422 aaPredicted RBP7.38□□□□□ -1.23
UBR4-201ENST00000375218 MEGF11A6BM72 1044 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 GABARAPH6UMI1 98 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 TNFSF13O75888 250 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 EPPINO95925 133 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 EIF4EP06730 217 aaKnown RBP7.38□□□□□ -1.23
UBR4-201ENST00000375218 CXCL12P48061 93 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 FHL5Q5TD97 284 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 CNIH2Q6PI25 160 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 ZNF773Q6PK81 442 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 BRK1Q8WUW1 75 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 A0A0B4J2A0 478 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 GSTZ1O43708 216 aaPredicted RBP7.38□□□□□ -1.23
UBR4-201ENST00000375218 IGKV1D-16P01601 117 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 IGLC1P0CG04 106 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 KDM4DQ6B0I6 523 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 OR2M3Q8NG83 312 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 ELSPBP1Q96BH3 223 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 C18orf15Q96N68 181 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 PITX2Q99697 317 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 TEX101Q9BY14 249 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 MMP26Q9NRE1 261 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 NUDT4Q9NZJ9 180 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 IL36AQ9UHA7 158 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 SHPKQ9UHJ6 478 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 RPUSD1Q9UJJ7 312 aaKnown RBP7.38□□□□□ -1.23
UBR4-201ENST00000375218 POMPQ9Y244 141 aa7.38□□□□□ -1.23
UBR4-201ENST00000375218 CACNG7P62955 275 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms