RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 ZNF695Q8IW36 515 aa11.78□□□□□ -0.52
HSPG2-201ENST00000374673 FAM219AQ8IW50 185 aa11.78□□□□□ -0.52
HSPG2-201ENST00000374673 MINDY2Q8NBR6 621 aa11.78□□□□□ -0.52
HSPG2-201ENST00000374673 LFNGQ8NES3 379 aa11.78□□□□□ -0.52
HSPG2-201ENST00000374673 OR4X2Q8NGF9 303 aa11.78□□□□□ -0.52
HSPG2-201ENST00000374673 ALX4Q9H161 411 aaPredicted RBP11.78□□□□□ -0.52
HSPG2-201ENST00000374673 WSB1Q9Y6I7 421 aa11.78□□□□□ -0.52
HSPG2-201ENST00000374673 PIGBOS1A0A0B4J2F0 54 aa11.77□□□□□ -0.53
HSPG2-201ENST00000374673 C15orf61A6NNL5 157 aa11.77□□□□□ -0.53
HSPG2-201ENST00000374673 SNAPC5O75971 98 aa11.77□□□□□ -0.53
HSPG2-201ENST00000374673 IGHG4P01861 327 aa11.77□□□□□ -0.53
HSPG2-201ENST00000374673 OR4E1P0C645 316 aa11.77□□□□□ -0.53
HSPG2-201ENST00000374673 ANXA7P20073 488 aaKnown RBP11.77□□□□□ -0.53
HSPG2-201ENST00000374673 MECP2P51608 486 aaKnown RBP11.77□□□□□ -0.53
HSPG2-201ENST00000374673 SRSF4Q08170 494 aaKnown RBP11.77□□□□□ -0.53
HSPG2-201ENST00000374673 ASPHD1Q5U4P2 390 aa11.77□□□□□ -0.53
HSPG2-201ENST00000374673 TEX38Q6PEX7 206 aa11.77□□□□□ -0.53
HSPG2-201ENST00000374673 LGI3Q8N145 548 aa11.77□□□□□ -0.53
HSPG2-201ENST00000374673 LRTM2Q8N967 370 aa11.77□□□□□ -0.53
HSPG2-201ENST00000374673 DUSP18Q8NEJ0 188 aa11.77□□□□□ -0.53
HSPG2-201ENST00000374673 ENKURQ8TC29 256 aa11.77□□□□□ -0.53
HSPG2-201ENST00000374673 RRNAD1Q96FB5 475 aaKnown RBP11.77□□□□□ -0.53
HSPG2-201ENST00000374673 PHB2Q99623 299 aa11.77□□□□□ -0.53
HSPG2-201ENST00000374673 SPIN2AQ99865 258 aa11.77□□□□□ -0.53
HSPG2-201ENST00000374673 SPIN2BQ9BPZ2 258 aa11.77□□□□□ -0.53
HSPG2-201ENST00000374673 COMMD5Q9GZQ3 224 aa11.77□□□□□ -0.53
HSPG2-201ENST00000374673 PALMDQ9NP74 551 aa11.77□□□□□ -0.53
HSPG2-201ENST00000374673 NUDT15Q9NV35 164 aa11.77□□□□□ -0.53
HSPG2-201ENST00000374673 PRR13Q9NZ81 148 aa11.77□□□□□ -0.53
HSPG2-201ENST00000374673 PRNDQ9UKY0 176 aa11.77□□□□□ -0.53
HSPG2-201ENST00000374673 COL6A5A8TX70 2615 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 TRAV6A0A075B6T7 132 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 A0A0B4J2A0 478 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 A0A0G2JRQ6 117 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 A0A1W2PN81 502 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 DUXBA0A1W2PPF3 345 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 C9orf170A2RU37 121 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 MSGN1A6NI15 193 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 E7EUB6 86 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 IGLV1-40P01703 118 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 HLA-AP01891 365 aaKnown RBP11.76□□□□□ -0.53
HSPG2-201ENST00000374673 ELANEP08246 267 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 CD28P10747 220 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 MYOD1P15172 320 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 CHRNA7P36544 502 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 CD83Q01151 205 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 FOXE3Q13461 319 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 TCTEX1D4Q5JR98 221 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 THOC7Q6I9Y2 204 aaKnown RBP11.76□□□□□ -0.53
HSPG2-201ENST00000374673 LYG2Q86SG7 212 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 SLC35G3Q8N808 338 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 RNF152Q8N8N0 203 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 OR5M8Q8NGP6 311 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 RNASE11Q8TAA1 199 aaKnown RBP11.76□□□□□ -0.53
HSPG2-201ENST00000374673 LSM10Q969L4 123 aaKnown RBP11.76□□□□□ -0.53
HSPG2-201ENST00000374673 TMEM14BQ9NUH8 114 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 FKBP11Q9NYL4 201 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 SHPKQ9UHJ6 478 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 FOXA2Q9Y261 457 aaPredicted RBP11.76□□□□□ -0.53
HSPG2-201ENST00000374673 NSG2Q9Y328 171 aa11.76□□□□□ -0.53
HSPG2-201ENST00000374673 A0A1B0GW64 132 aa11.75□□□□□ -0.53
HSPG2-201ENST00000374673 CGB1A6NKQ9 187 aa11.75□□□□□ -0.53
HSPG2-201ENST00000374673 TEX22C9J3V5 150 aa11.75□□□□□ -0.53
HSPG2-201ENST00000374673 H2AFB2P0C5Z0 115 aa11.75□□□□□ -0.53
HSPG2-201ENST00000374673 PSMB8P28062 276 aa11.75□□□□□ -0.53
HSPG2-201ENST00000374673 OR2B8PP59922 312 aa11.75□□□□□ -0.53
HSPG2-201ENST00000374673 DHRS2Q13268 280 aa11.75□□□□□ -0.53
HSPG2-201ENST00000374673 ANKRD55Q3KP44 614 aa11.75□□□□□ -0.53
HSPG2-201ENST00000374673 NRARPQ7Z6K4 114 aa11.75□□□□□ -0.53
HSPG2-201ENST00000374673 ZNF429Q86V71 674 aa11.75□□□□□ -0.53
HSPG2-201ENST00000374673 C11orf44Q8N8P7 122 aa11.75□□□□□ -0.53
HSPG2-201ENST00000374673 OR5B3Q8NH48 314 aa11.75□□□□□ -0.53
HSPG2-201ENST00000374673 OR4A16Q8NH70 328 aa11.75□□□□□ -0.53
HSPG2-201ENST00000374673 CASTOR1Q8WTX7 329 aa11.75□□□□□ -0.53
HSPG2-201ENST00000374673 SRSF8Q9BRL6 282 aaKnown RBP11.75□□□□□ -0.53
HSPG2-201ENST00000374673 ZNF257Q9Y2Q1 563 aa11.75□□□□□ -0.53
HSPG2-201ENST00000374673 OR51B2Q9Y5P1 312 aa11.75□□□□□ -0.53
HSPG2-201ENST00000374673 TEX50A0A1B0GTY4 177 aa11.74□□□□□ -0.53
HSPG2-201ENST00000374673 DBX1A6NMT0 343 aa11.74□□□□□ -0.53
HSPG2-201ENST00000374673 SOX15O60248 233 aa11.74□□□□□ -0.53
HSPG2-201ENST00000374673 OPN1MWP04001 364 aa11.74□□□□□ -0.53
HSPG2-201ENST00000374673 OPN1MW2P0DN77 364 aa11.74□□□□□ -0.53
HSPG2-201ENST00000374673 OPN1MW3P0DN78 364 aa11.74□□□□□ -0.53
HSPG2-201ENST00000374673 IZUMO4Q1ZYL8 232 aa11.74□□□□□ -0.53
HSPG2-201ENST00000374673 C4orf46Q504U0 113 aa11.74□□□□□ -0.53
HSPG2-201ENST00000374673 CXorf66Q5JRM2 361 aaPredicted RBP11.74□□□□□ -0.53
HSPG2-201ENST00000374673 OR1L8Q8NGR8 309 aa11.74□□□□□ -0.53
HSPG2-201ENST00000374673 FAM110DQ8TAY7 271 aaPredicted RBP11.74□□□□□ -0.53
HSPG2-201ENST00000374673 GPR146Q96CH1 333 aa11.74□□□□□ -0.53
HSPG2-201ENST00000374673 FYTTD1Q96QD9 318 aaKnown RBP11.74□□□□□ -0.53
HSPG2-201ENST00000374673 CITED2Q99967 270 aaPredicted RBP11.74□□□□□ -0.53
HSPG2-201ENST00000374673 QTRT1Q9BXR0 403 aaKnown RBP11.74□□□□□ -0.53
HSPG2-201ENST00000374673 NDUFA4L2Q9NRX3 87 aa11.74□□□□□ -0.53
HSPG2-201ENST00000374673 A0A0B4J293 547 aa11.73□□□□□ -0.53
HSPG2-201ENST00000374673 HMX3A6NHT5 357 aa11.73□□□□□ -0.53
HSPG2-201ENST00000374673 H3BUA1 57 aa11.73□□□□□ -0.53
HSPG2-201ENST00000374673 BRI3O95415 125 aa11.73□□□□□ -0.53
HSPG2-201ENST00000374673 DUS4LO95620 317 aaKnown RBP11.73□□□□□ -0.53
HSPG2-201ENST00000374673 RAB25P57735 213 aa11.73□□□□□ -0.53
HSPG2-201ENST00000374673 AARDQ4LEZ3 155 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms