RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 PFDN5Q99471 154 aa12.81□□□□□ -0.36
TMEM50A-201ENST00000374358 PYGO2Q9BRQ0 406 aa12.81□□□□□ -0.36
TMEM50A-201ENST00000374358 SEPSECSQ9HD40 501 aaKnown RBP12.81□□□□□ -0.36
TMEM50A-201ENST00000374358 TUBG2Q9NRH3 451 aa12.81□□□□□ -0.36
TMEM50A-201ENST00000374358 FAM78BQ5VT40 261 aa12.8□□□□□ -0.36
TMEM50A-201ENST00000374358 PPP1R35Q8TAP8 253 aa12.8□□□□□ -0.36
TMEM50A-201ENST00000374358 GCM1Q9NP62 436 aa12.8□□□□□ -0.36
TMEM50A-201ENST00000374358 A0A0U1RQK1 487 aa12.8□□□□□ -0.36
TMEM50A-201ENST00000374358 SCO2A0A1W2PP80 73 aa12.8□□□□□ -0.36
TMEM50A-201ENST00000374358 RBFOX2O43251 390 aaKnown RBP eCLIP12.8□□□□□ -0.36
TMEM50A-201ENST00000374358 CGB3P0DN86 165 aa12.8□□□□□ -0.36
TMEM50A-201ENST00000374358 CGB7P0DN87 165 aa12.8□□□□□ -0.36
TMEM50A-201ENST00000374358 GLRXP35754 106 aa12.8□□□□□ -0.36
TMEM50A-201ENST00000374358 MZT1Q08AG7 82 aa12.8□□□□□ -0.36
TMEM50A-201ENST00000374358 CR1LQ2VPA4 569 aa12.8□□□□□ -0.36
TMEM50A-201ENST00000374358 TIMM23BQ5SRD1 257 aa12.8□□□□□ -0.36
TMEM50A-201ENST00000374358 UNQ6494/PRO21346Q6UXR6 183 aa12.8□□□□□ -0.36
TMEM50A-201ENST00000374358 LINC00469Q8N7U9 141 aa12.8□□□□□ -0.36
TMEM50A-201ENST00000374358 PRO1933Q9H354 126 aa12.8□□□□□ -0.36
TMEM50A-201ENST00000374358 NAV3Q8IVL0 2385 aa12.8□□□□□ -0.36
TMEM50A-201ENST00000374358 APC2O95996 2303 aa12.79□□□□□ -0.36
TMEM50A-201ENST00000374358 XKRY2A2RUG3 117 aa12.79□□□□□ -0.36
TMEM50A-201ENST00000374358 FOXH1O75593 365 aa12.79□□□□□ -0.36
TMEM50A-201ENST00000374358 IGKV1-16P04430 117 aa12.79□□□□□ -0.36
TMEM50A-201ENST00000374358 POLEQ07864 2286 aa12.79□□□□□ -0.36
TMEM50A-201ENST00000374358 A0A1B0GUS0 222 aa12.79□□□□□ -0.36
TMEM50A-201ENST00000374358 C15orf61A6NNL5 157 aa12.79□□□□□ -0.36
TMEM50A-201ENST00000374358 AMBPP02760 352 aa12.79□□□□□ -0.36
TMEM50A-201ENST00000374358 OR4S2Q8NH73 311 aa12.79□□□□□ -0.36
TMEM50A-201ENST00000374358 PITPNC1Q9UKF7 332 aa12.79□□□□□ -0.36
TMEM50A-201ENST00000374358 YTHDF2Q9Y5A9 579 aaKnown RBP12.79□□□□□ -0.36
TMEM50A-201ENST00000374358 PLXNB1O43157 2135 aa12.79□□□□□ -0.36
TMEM50A-201ENST00000374358 KBTBD11-OT1A0A1B0GTJ5 212 aa12.78□□□□□ -0.36
TMEM50A-201ENST00000374358 CA2P00918 260 aa12.78□□□□□ -0.36
TMEM50A-201ENST00000374358 IGHV1-46P01743 117 aa12.78□□□□□ -0.36
TMEM50A-201ENST00000374358 CFHR2P36980 270 aa12.78□□□□□ -0.36
TMEM50A-201ENST00000374358 OPRK1P41145 380 aa12.78□□□□□ -0.36
TMEM50A-201ENST00000374358 OR2T10Q8NGZ9 312 aa12.78□□□□□ -0.36
TMEM50A-201ENST00000374358 RND1Q92730 232 aa12.78□□□□□ -0.36
TMEM50A-201ENST00000374358 CSMD1Q96PZ7 3565 aa12.78□□□□□ -0.36
TMEM50A-201ENST00000374358 ACTL6BO94805 426 aa12.78□□□□□ -0.36
TMEM50A-201ENST00000374358 IL6RP08887 468 aaPredicted RBP12.78□□□□□ -0.36
TMEM50A-201ENST00000374358 HIST1H1BP16401 226 aaKnown RBP12.78□□□□□ -0.36
TMEM50A-201ENST00000374358 CCL8P80075 99 aa12.78□□□□□ -0.36
TMEM50A-201ENST00000374358 TNFAIP6P98066 277 aaPredicted RBP12.78□□□□□ -0.36
TMEM50A-201ENST00000374358 TMEM183AQ8IXX5 376 aa12.78□□□□□ -0.36
TMEM50A-201ENST00000374358 STPG3Q8N7X2 389 aa12.78□□□□□ -0.36
TMEM50A-201ENST00000374358 IDI2-AS1Q9NZ38 188 aa12.78□□□□□ -0.36
TMEM50A-201ENST00000374358 PTPRZ1P23471 2315 aaPredicted RBP12.78□□□□□ -0.36
TMEM50A-201ENST00000374358 CEP295Q9C0D2 2601 aa12.77□□□□□ -0.36
TMEM50A-201ENST00000374358 NPY1RP25929 384 aa12.77□□□□□ -0.36
TMEM50A-201ENST00000374358 IL3RAP26951 378 aa12.77□□□□□ -0.36
TMEM50A-201ENST00000374358 MRPS11P82912 194 aaKnown RBP12.77□□□□□ -0.36
TMEM50A-201ENST00000374358 SLC24A4Q8NFF2 622 aa12.77□□□□□ -0.36
TMEM50A-201ENST00000374358 OR1P1Q8NH06 330 aa12.77□□□□□ -0.36
TMEM50A-201ENST00000374358 ZCCHC14Q8WYQ9 949 aaKnown RBP12.77□□□□□ -0.36
TMEM50A-201ENST00000374358 GAFA1Q96PS6 74 aa12.77□□□□□ -0.36
TMEM50A-201ENST00000374358 IGLV3-9A0A075B6K5 115 aa12.77□□□□□ -0.37
TMEM50A-201ENST00000374358 CEACAM4O75871 244 aa12.77□□□□□ -0.37
TMEM50A-201ENST00000374358 STAG3L2P0CL84 134 aa12.77□□□□□ -0.37
TMEM50A-201ENST00000374358 STAG3L3P0CL85 134 aa12.77□□□□□ -0.37
TMEM50A-201ENST00000374358 IGFBP2P18065 325 aa12.77□□□□□ -0.37
TMEM50A-201ENST00000374358 THBS3P49746 956 aa12.77□□□□□ -0.37
TMEM50A-201ENST00000374358 OR52E5Q8NH55 327 aa12.77□□□□□ -0.37
TMEM50A-201ENST00000374358 LSM4Q9Y4Z0 139 aaKnown RBP12.77□□□□□ -0.37
TMEM50A-201ENST00000374358 TRGV10A0A0A0MS01 117 aa12.76□□□□□ -0.37
TMEM50A-201ENST00000374358 SRRM4A7MD48 611 aaKnown RBP12.76□□□□□ -0.37
TMEM50A-201ENST00000374358 TM4SF5O14894 197 aa12.76□□□□□ -0.37
TMEM50A-201ENST00000374358 GATA2P23769 480 aaPredicted RBP12.76□□□□□ -0.37
TMEM50A-201ENST00000374358 RPP30P78346 268 aaKnown RBP12.76□□□□□ -0.37
TMEM50A-201ENST00000374358 EFNB3Q15768 340 aa12.76□□□□□ -0.37
TMEM50A-201ENST00000374358 STUMQ69YW2 141 aa12.76□□□□□ -0.37
TMEM50A-201ENST00000374358 FAM169BQ8N8A8 192 aa12.76□□□□□ -0.37
TMEM50A-201ENST00000374358 RAB1CQ92928 201 aa12.76□□□□□ -0.37
TMEM50A-201ENST00000374358 ANAPC16Q96DE5 110 aa12.76□□□□□ -0.37
TMEM50A-201ENST00000374358 RNF7Q9UBF6 113 aa12.76□□□□□ -0.37
TMEM50A-201ENST00000374358 ZNF729A6NN14 1252 aaPredicted RBP12.76□□□□□ -0.37
TMEM50A-201ENST00000374358 FAM90A9PA6NNJ1 464 aa12.76□□□□□ -0.37
TMEM50A-201ENST00000374358 TGOLN2O43493 480 aa12.76□□□□□ -0.37
TMEM50A-201ENST00000374358 PDE6DO43924 150 aa12.76□□□□□ -0.37
TMEM50A-201ENST00000374358 CCKARP32238 428 aa12.76□□□□□ -0.37
TMEM50A-201ENST00000374358 NUBP1P53384 320 aa12.76□□□□□ -0.37
TMEM50A-201ENST00000374358 MLANAQ16655 118 aa12.76□□□□□ -0.37
TMEM50A-201ENST00000374358 KCNIP2Q9NS61 270 aa12.76□□□□□ -0.37
TMEM50A-201ENST00000374358 TMEM14BQ9NUH8 114 aa12.76□□□□□ -0.37
TMEM50A-201ENST00000374358 TPRP12270 2363 aaKnown RBP12.76□□□□□ -0.37
TMEM50A-201ENST00000374358 GGCTO75223 188 aaKnown RBP12.75□□□□□ -0.37
TMEM50A-201ENST00000374358 NDUFS6O75380 124 aaKnown RBP12.75□□□□□ -0.37
TMEM50A-201ENST00000374358 VENTXO95231 258 aa12.75□□□□□ -0.37
TMEM50A-201ENST00000374358 SH3BGRL2Q9UJC5 107 aa12.75□□□□□ -0.37
TMEM50A-201ENST00000374358 TMPRSS2O15393 492 aa12.75□□□□□ -0.37
TMEM50A-201ENST00000374358 MPDU1O75352 247 aa12.75□□□□□ -0.37
TMEM50A-201ENST00000374358 TMPRSS3P57727 454 aa12.75□□□□□ -0.37
TMEM50A-201ENST00000374358 ACTL10Q5JWF8 245 aa12.75□□□□□ -0.37
TMEM50A-201ENST00000374358 C1orf185Q5T7R7 199 aa12.75□□□□□ -0.37
TMEM50A-201ENST00000374358 ZNF439Q8NDP4 499 aa12.75□□□□□ -0.37
TMEM50A-201ENST00000374358 NPVFQ9HCQ7 196 aa12.75□□□□□ -0.37
TMEM50A-201ENST00000374358 LRBAP50851 2863 aa12.75□□□□□ -0.37
TMEM50A-201ENST00000374358 ZNF320A2RRD8 509 aa12.75□□□□□ -0.37
TMEM50A-201ENST00000374358 RAB7AP51149 207 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms