RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 BTNL3Q6UXE8 466 aa11.79□□□□□ -0.52
HMGA1-203ENST00000374116 TMEM18Q96B42 140 aa11.79□□□□□ -0.52
HMGA1-203ENST00000374116 OR2V2Q96R30 315 aa11.79□□□□□ -0.52
HMGA1-203ENST00000374116 RAB40CQ96S21 281 aa11.79□□□□□ -0.52
HMGA1-203ENST00000374116 CELSR1Q9NYQ6 3014 aa11.78□□□□□ -0.52
HMGA1-203ENST00000374116 MYO9AB2RTY4 2548 aa11.78□□□□□ -0.52
HMGA1-203ENST00000374116 IGKV1-39P01597 117 aa11.78□□□□□ -0.52
HMGA1-203ENST00000374116 IGKV1D-39P04432 117 aa11.78□□□□□ -0.52
HMGA1-203ENST00000374116 OMGP23515 440 aa11.78□□□□□ -0.52
HMGA1-203ENST00000374116 CFHR2P36980 270 aa11.78□□□□□ -0.52
HMGA1-203ENST00000374116 PAX9P55771 341 aa11.78□□□□□ -0.52
HMGA1-203ENST00000374116 RPL23AP62750 156 aaKnown RBP11.78□□□□□ -0.52
HMGA1-203ENST00000374116 PAX5Q02548 391 aa11.78□□□□□ -0.52
HMGA1-203ENST00000374116 DRAM1Q8N682 238 aa11.78□□□□□ -0.52
HMGA1-203ENST00000374116 OR5C1Q8NGR4 320 aa11.78□□□□□ -0.52
HMGA1-203ENST00000374116 TMEM170AQ8WVE7 144 aa11.78□□□□□ -0.52
HMGA1-203ENST00000374116 SAP30LQ9HAJ7 183 aa11.78□□□□□ -0.52
HMGA1-203ENST00000374116 DYSFO75923 2080 aa11.78□□□□□ -0.52
HMGA1-203ENST00000374116 KIAA1324LA8MWY0 1029 aaPredicted RBP11.77□□□□□ -0.52
HMGA1-203ENST00000374116 C12orf77C9JDV5 145 aa11.77□□□□□ -0.52
HMGA1-203ENST00000374116 OR3A1P47881 315 aa11.77□□□□□ -0.52
HMGA1-203ENST00000374116 DYNLT3P51808 116 aa11.77□□□□□ -0.52
HMGA1-203ENST00000374116 COL10A1Q03692 680 aa11.77□□□□□ -0.52
HMGA1-203ENST00000374116 MSMO1Q15800 293 aa11.77□□□□□ -0.52
HMGA1-203ENST00000374116 ZNF585BQ52M93 769 aa11.77□□□□□ -0.52
HMGA1-203ENST00000374116 ODF3L1Q8IXM7 274 aa11.77□□□□□ -0.52
HMGA1-203ENST00000374116 ZNF645Q8N7E2 425 aa11.77□□□□□ -0.52
HMGA1-203ENST00000374116 OR1L1Q8NH94 360 aa11.77□□□□□ -0.52
HMGA1-203ENST00000374116 UBALD1Q8TB05 177 aa11.77□□□□□ -0.52
HMGA1-203ENST00000374116 NINJ1Q92982 152 aa11.77□□□□□ -0.52
HMGA1-203ENST00000374116 P2RX4Q99571 388 aa11.77□□□□□ -0.52
HMGA1-203ENST00000374116 SDF2L1Q9HCN8 221 aa11.77□□□□□ -0.52
HMGA1-203ENST00000374116 BEX4Q9NWD9 120 aaPredicted RBP11.77□□□□□ -0.52
HMGA1-203ENST00000374116 CST7O76096 145 aa11.76□□□□□ -0.53
HMGA1-203ENST00000374116 EFNA4P52798 201 aa11.76□□□□□ -0.53
HMGA1-203ENST00000374116 AESQ08117 197 aa11.76□□□□□ -0.53
HMGA1-203ENST00000374116 CENPVQ7Z7K6 275 aaPredicted RBP11.76□□□□□ -0.53
HMGA1-203ENST00000374116 CCL17Q92583 94 aa11.76□□□□□ -0.53
HMGA1-203ENST00000374116 COQ2Q96H96 371 aa11.76□□□□□ -0.53
HMGA1-203ENST00000374116 CACNG5Q9UF02 275 aa11.76□□□□□ -0.53
HMGA1-203ENST00000374116 ZNF705GA8MUZ8 300 aaPredicted RBP11.76□□□□□ -0.53
HMGA1-203ENST00000374116 NXPH3O95157 252 aa11.76□□□□□ -0.53
HMGA1-203ENST00000374116 IGKV1-5P01602 117 aa11.76□□□□□ -0.53
HMGA1-203ENST00000374116 HBZP02008 142 aa11.76□□□□□ -0.53
HMGA1-203ENST00000374116 PFN1P07737 140 aaKnown RBP11.76□□□□□ -0.53
HMGA1-203ENST00000374116 ZNF16P17020 682 aaPredicted RBP11.76□□□□□ -0.53
HMGA1-203ENST00000374116 Q5PR19 223 aa11.76□□□□□ -0.53
HMGA1-203ENST00000374116 TEX38Q6PEX7 206 aa11.76□□□□□ -0.53
HMGA1-203ENST00000374116 TRAT1Q6PIZ9 186 aa11.76□□□□□ -0.53
HMGA1-203ENST00000374116 Q6ZRM9 215 aa11.76□□□□□ -0.53
HMGA1-203ENST00000374116 KRTAP1-3Q8IUG1 177 aa11.76□□□□□ -0.53
HMGA1-203ENST00000374116 ATP5SQ99766 215 aa11.76□□□□□ -0.53
HMGA1-203ENST00000374116 AGMATQ9BSE5 352 aa11.76□□□□□ -0.53
HMGA1-203ENST00000374116 KIAA2026Q5HYC2 2103 aa11.75□□□□□ -0.53
HMGA1-203ENST00000374116 OTOGQ6ZRI0 2925 aa11.75□□□□□ -0.53
HMGA1-203ENST00000374116 XKRY2A2RUG3 117 aa11.75□□□□□ -0.53
HMGA1-203ENST00000374116 SYNGR2O43760 224 aa11.75□□□□□ -0.53
HMGA1-203ENST00000374116 NPSP0C0P6 89 aa11.75□□□□□ -0.53
HMGA1-203ENST00000374116 GABRA2P47869 451 aa11.75□□□□□ -0.53
HMGA1-203ENST00000374116 FAM3BP58499 235 aaPredicted RBP11.75□□□□□ -0.53
HMGA1-203ENST00000374116 ACOT6Q3I5F7 207 aaPredicted RBP11.75□□□□□ -0.53
HMGA1-203ENST00000374116 MOGAT3Q86VF5 341 aa11.75□□□□□ -0.53
HMGA1-203ENST00000374116 FAM90A1Q86YD7 464 aa11.75□□□□□ -0.53
HMGA1-203ENST00000374116 THNSL2Q86YJ6 484 aa11.75□□□□□ -0.53
HMGA1-203ENST00000374116 WFDC11Q8NEX6 87 aa11.75□□□□□ -0.53
HMGA1-203ENST00000374116 LRRC29Q8WV35 223 aa11.75□□□□□ -0.53
HMGA1-203ENST00000374116 MBD6Q96DN6 1003 aa11.75□□□□□ -0.53
HMGA1-203ENST00000374116 IGHV1-69-2A0A0G2JMI3 117 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 A0A1B0GV50 99 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 SRRM5B3KS81 715 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 FAM90A26D6RGX4 464 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 TNFSF4P23510 183 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 TAS2R30P59541 319 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 PMS2P11Q13670 270 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 COTL1Q14019 142 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 SAPCD1Q5SSQ6 148 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 FAM201AQ5SY85 155 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 TMEM217Q8N7C4 229 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 OR52L2PQ8NGH6 319 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 NEU4Q8WWR8 484 aaPredicted RBP11.74□□□□□ -0.53
HMGA1-203ENST00000374116 ABHD14AQ9BUJ0 271 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 GCM1Q9NP62 436 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 IL19Q9UHD0 177 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 CREBBPQ92793 2442 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 TYMSP04818 313 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 BCL2P10415 239 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 CATR1Q13166 79 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 EIF4EBP1Q13541 118 aaPredicted RBP11.74□□□□□ -0.53
HMGA1-203ENST00000374116 TCTEX1D1Q8N7M0 179 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 MAPK1IP1LQ8NDC0 245 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 MRGPRDQ8TDS7 321 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 C20orf144Q9BQM9 153 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 OR2D2Q9H210 308 aa11.74□□□□□ -0.53
HMGA1-203ENST00000374116 ZNF737O75373 536 aa11.73□□□□□ -0.53
HMGA1-203ENST00000374116 LHBP01229 141 aa11.73□□□□□ -0.53
HMGA1-203ENST00000374116 IFNA5P01569 189 aa11.73□□□□□ -0.53
HMGA1-203ENST00000374116 CD55P08174 381 aa11.73□□□□□ -0.53
HMGA1-203ENST00000374116 ADH4P08319 380 aa11.73□□□□□ -0.53
HMGA1-203ENST00000374116 EGR1P18146 543 aa11.73□□□□□ -0.53
HMGA1-203ENST00000374116 OR10J1P30954 320 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms