RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 PLP1P60201 277 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 TGFBR3Q03167 851 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 HSD52Q0P140 79 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 FXYD3Q14802 87 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 FAM216AQ8WUB2 273 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 OR2V2Q96R30 315 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 TXNDC17Q9BRA2 123 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 DEPPQ9NTK1 212 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 C1RLQ9NZP8 487 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 LY96Q9Y6Y9 160 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 C20orf204Q6ZNR8 217 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 TSACCQ96A04 125 aaPredicted RBP7.97□□□□□ -1.13
SF3A3-201ENST00000373019 TMEM45BQ96B21 275 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 BORCS8Q96FH0 119 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 POM121L2Q96KW2 1035 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 HS3ST6Q96QI5 342 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 C19orf25Q9UFG5 118 aaPredicted RBP7.97□□□□□ -1.13
SF3A3-201ENST00000373019 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.96□□□□□ -1.13
SF3A3-201ENST00000373019 SH2D7A6NKC9 451 aaPredicted RBP7.96□□□□□ -1.13
SF3A3-201ENST00000373019 H3BUT2 72 aa7.96□□□□□ -1.13
SF3A3-201ENST00000373019 ZNF542PQ5EBM4 170 aa7.96□□□□□ -1.13
SF3A3-201ENST00000373019 STPG3Q8N7X2 389 aa7.96□□□□□ -1.13
SF3A3-201ENST00000373019 OR2T6Q8NHC8 308 aa7.96□□□□□ -1.13
SF3A3-201ENST00000373019 MED12Q93074 2177 aa7.96□□□□□ -1.13
SF3A3-201ENST00000373019 IGF2RP11717 2491 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 TRGV10A0A0A0MS01 117 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 H3BMH7 237 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 M0R135 149 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 PLCXD2Q0VAA5 305 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 COX19Q49B96 90 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 GDF5OSQ5U4N7 250 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 C1orf122Q6ZSJ8 110 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 LHFPL2Q6ZUX7 228 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 OR2K2Q8NGT1 345 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 ZNF799Q96GE5 643 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 ALKBH4Q9NXW9 302 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 A0A0G2JMM0 328 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 A0A1W2PPB8 328 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 A0A1W2PQU0 124 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 SMIM27A0A1W2PRY6 76 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 TMEM189A5PLL7 270 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 KIR3DP1A8MWS1 328 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 SYS1-DBNDD2H3BUS1 97 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 STAG3L2P0CL84 134 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 KLF5Q13887 457 aaPredicted RBP7.96□□□□□ -1.14
SF3A3-201ENST00000373019 DOLPP1Q86YN1 238 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 OR5A2Q8NGI9 324 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 MMABQ96EY8 250 aaPredicted RBP7.96□□□□□ -1.14
SF3A3-201ENST00000373019 PERPQ96FX8 193 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 OR2W1Q9Y3N9 320 aa7.96□□□□□ -1.14
SF3A3-201ENST00000373019 EXPH5Q8NEV8 1989 aa7.95□□□□□ -1.14
SF3A3-201ENST00000373019 KMT2EQ8IZD2 1858 aa7.95□□□□□ -1.14
SF3A3-201ENST00000373019 GAGE12HA6NDE8 117 aa7.95□□□□□ -1.14
SF3A3-201ENST00000373019 H0Y8X5 98 aa7.95□□□□□ -1.14
SF3A3-201ENST00000373019 H3BRM9 83 aa7.95□□□□□ -1.14
SF3A3-201ENST00000373019 RPL8P62917 257 aaKnown RBP7.95□□□□□ -1.14
SF3A3-201ENST00000373019 SEC11AP67812 179 aa7.95□□□□□ -1.14
SF3A3-201ENST00000373019 TMEM42Q69YG0 159 aa7.95□□□□□ -1.14
SF3A3-201ENST00000373019 C11orf52Q96A22 123 aa7.95□□□□□ -1.14
SF3A3-201ENST00000373019 JKAMPQ9P055 326 aa7.95□□□□□ -1.14
SF3A3-201ENST00000373019 GABRG2P18507 467 aa7.95□□□□□ -1.14
SF3A3-201ENST00000373019 CD300EQ496F6 205 aaPredicted RBP7.95□□□□□ -1.14
SF3A3-201ENST00000373019 ZNF788Q6ZQV5 615 aa7.95□□□□□ -1.14
SF3A3-201ENST00000373019 FGFRL1Q8N441 504 aa7.95□□□□□ -1.14
SF3A3-201ENST00000373019 SSBP4Q9BWG4 385 aaPredicted RBP7.95□□□□□ -1.14
SF3A3-201ENST00000373019 ESPL1Q14674 2120 aa7.95□□□□□ -1.14
SF3A3-201ENST00000373019 FAM90A26D6RGX4 464 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 ZNF207O43670 478 aaKnown RBP7.94□□□□□ -1.14
SF3A3-201ENST00000373019 SP9P0CG40 484 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 EDDM3BP56851 147 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 C5orf64Q2M2E5 130 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 LYSMD4Q5XG99 296 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 RNASEKQ6P5S7 137 aaKnown RBP7.94□□□□□ -1.14
SF3A3-201ENST00000373019 GJC3Q8NFK1 279 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 TSSC4Q9Y5U2 329 aaPredicted RBP7.94□□□□□ -1.14
SF3A3-201ENST00000373019 SNAI2O43623 268 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 UQCRFS1P47985 274 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 RPS21P63220 83 aaKnown RBP7.94□□□□□ -1.14
SF3A3-201ENST00000373019 RAB31Q13636 194 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 TMEM97Q5BJF2 176 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 SHISA6Q6ZSJ9 500 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 OR10AG1Q8NH19 301 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 NABP1Q96AH0 204 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 BMFQ96LC9 184 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 MCRIP2Q9BUT9 160 aaKnown RBP7.94□□□□□ -1.14
SF3A3-201ENST00000373019 PGPEP1Q9NXJ5 209 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 A0A1W2PPV4 95 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 PSMB11A5LHX3 300 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 HSPB6O14558 160 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 USF1P22415 310 aaPredicted RBP7.94□□□□□ -1.14
SF3A3-201ENST00000373019 FBXW4P57775 412 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 RAC3P60763 192 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 TCTEX1D4Q5JR98 221 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 ZDHHC16Q969W1 377 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 IL36RNQ9UBH0 155 aa7.94□□□□□ -1.14
SF3A3-201ENST00000373019 A0A0G2JLM5 398 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 VSTM5A8MXK1 200 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 ZG16O60844 167 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 CA1P00915 261 aaPredicted RBP7.93□□□□□ -1.14
SF3A3-201ENST00000373019 HTR1DP28221 377 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms