RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 LRTM2Q8N967 370 aa9.78□□□□□ -0.84
VCL-202ENST00000372755 ZNRF1Q8ND25 227 aa9.78□□□□□ -0.84
VCL-202ENST00000372755 C1orf162Q8NEQ5 155 aaPredicted RBP9.78□□□□□ -0.84
VCL-202ENST00000372755 SDF2L1Q9HCN8 221 aa9.78□□□□□ -0.84
VCL-202ENST00000372755 C21orf62Q9NYP8 219 aa9.78□□□□□ -0.84
VCL-202ENST00000372755 PEMTQ9UBM1 199 aa9.78□□□□□ -0.84
VCL-202ENST00000372755 MPTX1A8MV57 137 aa9.78□□□□□ -0.84
VCL-202ENST00000372755 TBR1Q16650 682 aa9.78□□□□□ -0.84
VCL-202ENST00000372755 LINC01590Q5TEZ4 76 aa9.78□□□□□ -0.84
VCL-202ENST00000372755 CACNA1CQ13936 2221 aa9.78□□□□□ -0.84
VCL-202ENST00000372755 KLF4O43474 513 aa9.78□□□□□ -0.84
VCL-202ENST00000372755 IGHV3-48P01763 117 aa9.78□□□□□ -0.84
VCL-202ENST00000372755 FOXA2Q9Y261 457 aaPredicted RBP9.78□□□□□ -0.84
VCL-202ENST00000372755 SCN9AQ15858 1988 aa9.78□□□□□ -0.84
VCL-202ENST00000372755 PEX7O00628 323 aa9.77□□□□□ -0.84
VCL-202ENST00000372755 IGKV1D-33P01593 117 aa9.77□□□□□ -0.84
VCL-202ENST00000372755 IGKV1-33P01594 117 aa9.77□□□□□ -0.84
VCL-202ENST00000372755 IGHV3-23P01764 117 aa9.77□□□□□ -0.84
VCL-202ENST00000372755 CNTFRP26992 372 aa9.77□□□□□ -0.84
VCL-202ENST00000372755 PPP1R32Q7Z5V6 425 aa9.77□□□□□ -0.84
VCL-202ENST00000372755 ARPC1AQ92747 370 aa9.77□□□□□ -0.84
VCL-202ENST00000372755 CBLN4Q9NTU7 201 aa9.77□□□□□ -0.84
VCL-202ENST00000372755 PGPEP1Q9NXJ5 209 aa9.77□□□□□ -0.84
VCL-202ENST00000372755 IGHV3OR16-13A0A075B7E8 117 aa9.77□□□□□ -0.84
VCL-202ENST00000372755 IGHV3-74A0A0B4J1X5 117 aa9.77□□□□□ -0.84
VCL-202ENST00000372755 ZNF708P17019 499 aa9.77□□□□□ -0.84
VCL-202ENST00000372755 NUDT10Q8NFP7 164 aa9.77□□□□□ -0.84
VCL-202ENST00000372755 SPSB2Q99619 263 aa9.77□□□□□ -0.84
VCL-202ENST00000372755 FBXL15Q9H469 300 aa9.77□□□□□ -0.84
VCL-202ENST00000372755 FOXJ2Q9P0K8 574 aa9.77□□□□□ -0.84
VCL-202ENST00000372755 C4orf51C9J302 202 aa9.77□□□□□ -0.85
VCL-202ENST00000372755 CD8AP01732 235 aa9.77□□□□□ -0.85
VCL-202ENST00000372755 CIARTQ8N365 385 aaPredicted RBP9.77□□□□□ -0.85
VCL-202ENST00000372755 APOHP02749 345 aaPredicted RBP9.77□□□□□ -0.85
VCL-202ENST00000372755 CBLN1P23435 193 aa9.77□□□□□ -0.85
VCL-202ENST00000372755 NHLRC3Q5JS37 347 aa9.77□□□□□ -0.85
VCL-202ENST00000372755 FAM90A1Q86YD7 464 aa9.77□□□□□ -0.85
VCL-202ENST00000372755 KCNS1Q96KK3 526 aa9.77□□□□□ -0.85
VCL-202ENST00000372755 ZNF703Q9H7S9 590 aaPredicted RBP9.77□□□□□ -0.85
VCL-202ENST00000372755 A0A1B0GUT8 65 aa9.77□□□□□ -0.85
VCL-202ENST00000372755 C12orf77C9JDV5 145 aa9.77□□□□□ -0.85
VCL-202ENST00000372755 FAM209BQ5JX69 171 aa9.77□□□□□ -0.85
VCL-202ENST00000372755 RPP21Q9H633 154 aaKnown RBP9.77□□□□□ -0.85
VCL-202ENST00000372755 EIF3GO75821 320 aaKnown RBP eCLIP9.76□□□□□ -0.85
VCL-202ENST00000372755 EFEMP2O95967 443 aa9.76□□□□□ -0.85
VCL-202ENST00000372755 NRN1LQ496H8 165 aa9.76□□□□□ -0.85
VCL-202ENST00000372755 C19orf48Q6RUI8 117 aa9.76□□□□□ -0.85
VCL-202ENST00000372755 RNASEH2CQ8TDP1 164 aaKnown RBP9.76□□□□□ -0.85
VCL-202ENST00000372755 LINC01587Q99440 93 aa9.76□□□□□ -0.85
VCL-202ENST00000372755 WFDC6Q9BQY6 131 aa9.76□□□□□ -0.85
VCL-202ENST00000372755 TM2D1Q9BX74 207 aa9.76□□□□□ -0.85
VCL-202ENST00000372755 TRAV9-1A0A075B6T8 112 aa9.76□□□□□ -0.85
VCL-202ENST00000372755 IGHV3-66A0A0C4DH42 116 aa9.76□□□□□ -0.85
VCL-202ENST00000372755 ZNF815PA8K554 130 aa9.76□□□□□ -0.85
VCL-202ENST00000372755 SIGLEC5O15389 551 aa9.76□□□□□ -0.85
VCL-202ENST00000372755 LINC00469Q8N7U9 141 aa9.76□□□□□ -0.85
VCL-202ENST00000372755 OR11H4Q8NGC9 324 aa9.76□□□□□ -0.85
VCL-202ENST00000372755 WDYHV1Q96HA8 205 aa9.76□□□□□ -0.85
VCL-202ENST00000372755 C18orf15Q96N68 181 aa9.76□□□□□ -0.85
VCL-202ENST00000372755 CNTRLQ7Z7A1 2325 aa9.76□□□□□ -0.85
VCL-202ENST00000372755 OR52E5Q8NH55 327 aa9.76□□□□□ -0.85
VCL-202ENST00000372755 RCC1LQ96I51 464 aaKnown RBP9.76□□□□□ -0.85
VCL-202ENST00000372755 KBTBD11-OT1A0A1B0GTJ5 212 aa9.76□□□□□ -0.85
VCL-202ENST00000372755 FOXC2Q99958 501 aa9.76□□□□□ -0.85
VCL-202ENST00000372755 CGAP01215 116 aa9.75□□□□□ -0.85
VCL-202ENST00000372755 TDGF1P13385 188 aa9.75□□□□□ -0.85
VCL-202ENST00000372755 FOXA3P55318 350 aaPredicted RBP9.75□□□□□ -0.85
VCL-202ENST00000372755 FAM168AQ92567 244 aa9.75□□□□□ -0.85
VCL-202ENST00000372755 CDK5RAP2Q96SN8 1893 aa9.75□□□□□ -0.85
VCL-202ENST00000372755 IGFBP2P18065 325 aa9.75□□□□□ -0.85
VCL-202ENST00000372755 FDCSPQ8NFU4 85 aa9.75□□□□□ -0.85
VCL-202ENST00000372755 CACNG8Q8WXS5 425 aa9.75□□□□□ -0.85
VCL-202ENST00000372755 VCX2Q9H322 139 aa9.75□□□□□ -0.85
VCL-202ENST00000372755 TRBV7-9A0A0J9YWB2 115 aa9.75□□□□□ -0.85
VCL-202ENST00000372755 CECR9P0C854 216 aa9.75□□□□□ -0.85
VCL-202ENST00000372755 GPR183P32249 361 aa9.75□□□□□ -0.85
VCL-202ENST00000372755 FHITP49789 147 aa9.75□□□□□ -0.85
VCL-202ENST00000372755 SPRED2Q7Z698 418 aa9.75□□□□□ -0.85
VCL-202ENST00000372755 ZNF418Q8TF45 676 aaPredicted RBP9.75□□□□□ -0.85
VCL-202ENST00000372755 SDHCQ99643 169 aaPredicted RBP9.75□□□□□ -0.85
VCL-202ENST00000372755 RNASE4P34096 147 aaKnown RBP9.75□□□□□ -0.85
VCL-202ENST00000372755 LEPP41159 167 aa9.75□□□□□ -0.85
VCL-202ENST00000372755 MARVELD3Q96A59 401 aa9.75□□□□□ -0.85
VCL-202ENST00000372755 WFIKKN1Q96NZ8 548 aa9.75□□□□□ -0.85
VCL-202ENST00000372755 IGHV3-49A0A0A0MS15 119 aa9.75□□□□□ -0.85
VCL-202ENST00000372755 EGR4Q05215 589 aa9.75□□□□□ -0.85
VCL-202ENST00000372755 FER1L6-AS1Q8NA97 138 aa9.75□□□□□ -0.85
VCL-202ENST00000372755 TRGV2A0A075B6R0 118 aa9.74□□□□□ -0.85
VCL-202ENST00000372755 A0A1W2PR77 199 aa9.74□□□□□ -0.85
VCL-202ENST00000372755 GREM1O60565 184 aa9.74□□□□□ -0.85
VCL-202ENST00000372755 FAM169BQ8N8A8 192 aa9.74□□□□□ -0.85
VCL-202ENST00000372755 NUDT11Q96G61 164 aa9.74□□□□□ -0.85
VCL-202ENST00000372755 RPRMQ9NS64 109 aa9.74□□□□□ -0.85
VCL-202ENST00000372755 C19orf67A6NJJ6 358 aa9.74□□□□□ -0.85
VCL-202ENST00000372755 MYOD1P15172 320 aa9.74□□□□□ -0.85
VCL-202ENST00000372755 CLEC19AQ6UXS0 136 aa9.74□□□□□ -0.85
VCL-202ENST00000372755 ZIC4Q8N9L1 334 aa9.74□□□□□ -0.85
VCL-202ENST00000372755 FAM57AQ8TBR7 257 aa9.74□□□□□ -0.85
VCL-202ENST00000372755 TOMM7Q9P0U1 55 aa9.74□□□□□ -0.85
VCL-202ENST00000372755 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms